Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
HCFC1P51610 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
HCFC1P51610 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
HCFC1P51610 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC21.51■■□□□ 1.03
HCFC1P51610 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.51■■□□□ 1.03
HCFC1P51610 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC21.51■■□□□ 1.03
HCFC1P51610 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HCFC1P51610 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC21.51■■□□□ 1.03
HCFC1P51610 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC21.51■■□□□ 1.03
HCFC1P51610 THA1P-201ENST00000590384 1145 ntBASIC21.51■■□□□ 1.03
HCFC1P51610 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.51■■□□□ 1.03
HCFC1P51610 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HCFC1P51610 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
HCFC1P51610 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HCFC1P51610 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
HCFC1P51610 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC21.5■■□□□ 1.03
HCFC1P51610 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
HCFC1P51610 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
HCFC1P51610 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.49■■□□□ 1.03
HCFC1P51610 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
HCFC1P51610 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
HCFC1P51610 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC21.49■■□□□ 1.03
HCFC1P51610 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
HCFC1P51610 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
HCFC1P51610 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.48■■□□□ 1.03
HCFC1P51610 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
HCFC1P51610 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21.48■■□□□ 1.03
HCFC1P51610 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
HCFC1P51610 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
HCFC1P51610 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
HCFC1P51610 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
HCFC1P51610 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.46■■□□□ 1.03
HCFC1P51610 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
HCFC1P51610 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
HCFC1P51610 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
HCFC1P51610 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC21.45■■□□□ 1.02
HCFC1P51610 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
HCFC1P51610 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
HCFC1P51610 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.45■■□□□ 1.02
HCFC1P51610 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
HCFC1P51610 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.44■■□□□ 1.02
HCFC1P51610 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
HCFC1P51610 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC21.44■■□□□ 1.02
HCFC1P51610 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
HCFC1P51610 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.44■■□□□ 1.02
HCFC1P51610 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.44■■□□□ 1.02
HCFC1P51610 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
HCFC1P51610 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
HCFC1P51610 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.43■■□□□ 1.02
HCFC1P51610 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
HCFC1P51610 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC21.43■■□□□ 1.02
HCFC1P51610 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
HCFC1P51610 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.42■■□□□ 1.02
HCFC1P51610 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
HCFC1P51610 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
HCFC1P51610 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.42■■□□□ 1.02
HCFC1P51610 AC018755.3-202ENST00000596210 929 ntBASIC21.42■■□□□ 1.02
HCFC1P51610 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
HCFC1P51610 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HCFC1P51610 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
HCFC1P51610 Z92544.1-202ENST00000571933 1220 ntBASIC21.41■■□□□ 1.02
HCFC1P51610 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HCFC1P51610 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.41■■□□□ 1.02
HCFC1P51610 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
HCFC1P51610 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.41■■□□□ 1.02
HCFC1P51610 AL031848.2-201ENST00000607670 837 ntBASIC21.41■■□□□ 1.02
HCFC1P51610 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
HCFC1P51610 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.4■■□□□ 1.02
HCFC1P51610 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC21.4■■□□□ 1.02
HCFC1P51610 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
HCFC1P51610 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
HCFC1P51610 AC087393.1-201ENST00000582896 145 ntBASIC21.39■■□□□ 1.02
HCFC1P51610 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.39■■□□□ 1.02
HCFC1P51610 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.39■■□□□ 1.02
HCFC1P51610 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
HCFC1P51610 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC21.39■■□□□ 1.01
HCFC1P51610 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC21.39■■□□□ 1.01
HCFC1P51610 AC019171.1-201ENST00000601251 1056 ntBASIC21.39■■□□□ 1.01
HCFC1P51610 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
HCFC1P51610 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HCFC1P51610 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC21.38■■□□□ 1.01
HCFC1P51610 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
HCFC1P51610 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HCFC1P51610 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HCFC1P51610 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.38■■□□□ 1.01
HCFC1P51610 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.38■■□□□ 1.01
HCFC1P51610 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
HCFC1P51610 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC21.37■■□□□ 1.01
HCFC1P51610 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC21.37■■□□□ 1.01
HCFC1P51610 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC21.37■■□□□ 1.01
HCFC1P51610 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.37■■□□□ 1.01
HCFC1P51610 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.37■■□□□ 1.01
HCFC1P51610 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HCFC1P51610 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
HCFC1P51610 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
HCFC1P51610 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
HCFC1P51610 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HCFC1P51610 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HCFC1P51610 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
HCFC1P51610 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms