Protein–RNA interactions for Protein: P49767

VEGFC, Vascular endothelial growth factor C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFCP49767 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
VEGFCP49767 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
VEGFCP49767 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
VEGFCP49767 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
VEGFCP49767 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
VEGFCP49767 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC20.93■□□□□ 0.94
VEGFCP49767 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
VEGFCP49767 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
VEGFCP49767 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
VEGFCP49767 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
VEGFCP49767 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
VEGFCP49767 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.92■□□□□ 0.94
VEGFCP49767 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
VEGFCP49767 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
VEGFCP49767 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.92■□□□□ 0.94
VEGFCP49767 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.92■□□□□ 0.94
VEGFCP49767 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
VEGFCP49767 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
VEGFCP49767 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
VEGFCP49767 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.91■□□□□ 0.94
VEGFCP49767 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
VEGFCP49767 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
VEGFCP49767 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC20.91■□□□□ 0.94
VEGFCP49767 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VEGFCP49767 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VEGFCP49767 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.9■□□□□ 0.94
VEGFCP49767 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VEGFCP49767 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
VEGFCP49767 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VEGFCP49767 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VEGFCP49767 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
VEGFCP49767 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC20.9■□□□□ 0.94
VEGFCP49767 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VEGFCP49767 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
VEGFCP49767 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VEGFCP49767 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
VEGFCP49767 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
VEGFCP49767 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
VEGFCP49767 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.89■□□□□ 0.94
VEGFCP49767 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
VEGFCP49767 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
VEGFCP49767 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
VEGFCP49767 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.89■□□□□ 0.93
VEGFCP49767 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.89■□□□□ 0.93
VEGFCP49767 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
VEGFCP49767 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
VEGFCP49767 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VEGFCP49767 AP006261.1-201ENST00000584783 668 ntBASIC20.88■□□□□ 0.93
VEGFCP49767 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
VEGFCP49767 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.88■□□□□ 0.93
VEGFCP49767 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VEGFCP49767 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VEGFCP49767 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
VEGFCP49767 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VEGFCP49767 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
VEGFCP49767 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
VEGFCP49767 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
VEGFCP49767 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
VEGFCP49767 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.86■□□□□ 0.93
VEGFCP49767 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VEGFCP49767 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC20.86■□□□□ 0.93
VEGFCP49767 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
VEGFCP49767 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
VEGFCP49767 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.86■□□□□ 0.93
VEGFCP49767 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
VEGFCP49767 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
VEGFCP49767 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.86■□□□□ 0.93
VEGFCP49767 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VEGFCP49767 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
VEGFCP49767 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VEGFCP49767 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VEGFCP49767 AC087741.3-201ENST00000624270 1347 ntBASIC20.85■□□□□ 0.93
VEGFCP49767 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
VEGFCP49767 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC20.85■□□□□ 0.93
VEGFCP49767 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
VEGFCP49767 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
VEGFCP49767 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
VEGFCP49767 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VEGFCP49767 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VEGFCP49767 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
VEGFCP49767 AC142381.3-201ENST00000568208 1670 ntBASIC20.83■□□□□ 0.93
VEGFCP49767 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
VEGFCP49767 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
VEGFCP49767 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
VEGFCP49767 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.82■□□□□ 0.92
VEGFCP49767 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
VEGFCP49767 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.82■□□□□ 0.92
VEGFCP49767 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
VEGFCP49767 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
VEGFCP49767 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
VEGFCP49767 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
VEGFCP49767 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
VEGFCP49767 AC010501.1-201ENST00000606270 1962 ntBASIC20.82■□□□□ 0.92
VEGFCP49767 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.82■□□□□ 0.92
VEGFCP49767 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
VEGFCP49767 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
VEGFCP49767 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
VEGFCP49767 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
VEGFCP49767 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
VEGFCP49767 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 12.2 ms