Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 HES6-204ENST00000409182 863 ntTSL 2 BASIC32.98■■■□□ 2.87
LTN1O94822 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC32.98■■■□□ 2.87
LTN1O94822 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC32.98■■■□□ 2.87
LTN1O94822 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC32.98■■■□□ 2.87
LTN1O94822 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
LTN1O94822 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC32.97■■■□□ 2.87
LTN1O94822 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC32.97■■■□□ 2.87
LTN1O94822 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC32.97■■■□□ 2.87
LTN1O94822 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
LTN1O94822 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC32.97■■■□□ 2.87
LTN1O94822 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC32.97■■■□□ 2.87
LTN1O94822 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC32.97■■■□□ 2.87
LTN1O94822 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
LTN1O94822 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC32.96■■■□□ 2.87
LTN1O94822 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC32.96■■■□□ 2.87
LTN1O94822 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC32.95■■■□□ 2.87
LTN1O94822 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC32.95■■■□□ 2.87
LTN1O94822 MTX2-204ENST00000443241 799 ntTSL 3 BASIC32.95■■■□□ 2.87
LTN1O94822 PRTG-204ENST00000561292 833 ntTSL 3 BASIC32.95■■■□□ 2.87
LTN1O94822 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
LTN1O94822 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
LTN1O94822 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC32.93■■■□□ 2.86
LTN1O94822 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
LTN1O94822 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC32.92■■■□□ 2.86
LTN1O94822 AC018755.3-202ENST00000596210 929 ntBASIC32.92■■■□□ 2.86
LTN1O94822 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC32.92■■■□□ 2.86
LTN1O94822 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
LTN1O94822 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC32.91■■■□□ 2.86
LTN1O94822 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC32.91■■■□□ 2.86
LTN1O94822 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC32.91■■■□□ 2.86
LTN1O94822 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC32.91■■■□□ 2.86
LTN1O94822 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
LTN1O94822 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC32.9■■■□□ 2.86
LTN1O94822 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC32.9■■■□□ 2.86
LTN1O94822 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC32.9■■■□□ 2.86
LTN1O94822 AC087393.1-201ENST00000582896 145 ntBASIC32.9■■■□□ 2.86
LTN1O94822 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC32.9■■■□□ 2.86
LTN1O94822 AC131212.1-201ENST00000613771 668 ntBASIC32.9■■■□□ 2.86
LTN1O94822 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC32.9■■■□□ 2.86
LTN1O94822 AL449106.1-201ENST00000608517 1980 ntBASIC32.9■■■□□ 2.86
LTN1O94822 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC32.89■■■□□ 2.86
LTN1O94822 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC32.89■■■□□ 2.86
LTN1O94822 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC32.89■■■□□ 2.86
LTN1O94822 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC32.89■■■□□ 2.86
LTN1O94822 OR2A1-AS1-204ENST00000470435 602 ntBASIC32.88■■■□□ 2.85
LTN1O94822 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
LTN1O94822 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
LTN1O94822 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
LTN1O94822 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
LTN1O94822 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
LTN1O94822 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC32.87■■■□□ 2.85
LTN1O94822 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
LTN1O94822 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC32.87■■■□□ 2.85
LTN1O94822 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC32.87■■■□□ 2.85
LTN1O94822 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC32.87■■■□□ 2.85
LTN1O94822 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC32.87■■■□□ 2.85
LTN1O94822 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
LTN1O94822 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
LTN1O94822 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC32.86■■■□□ 2.85
LTN1O94822 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC32.86■■■□□ 2.85
LTN1O94822 AL592295.1-201ENST00000400984 884 ntBASIC32.86■■■□□ 2.85
LTN1O94822 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC32.86■■■□□ 2.85
LTN1O94822 AL031848.2-201ENST00000607670 837 ntBASIC32.86■■■□□ 2.85
LTN1O94822 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC32.86■■■□□ 2.85
LTN1O94822 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC32.85■■■□□ 2.85
LTN1O94822 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC32.85■■■□□ 2.85
LTN1O94822 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
LTN1O94822 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC32.85■■■□□ 2.85
LTN1O94822 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC32.84■■■□□ 2.85
LTN1O94822 AC019171.1-201ENST00000601251 1056 ntBASIC32.83■■■□□ 2.85
LTN1O94822 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC32.83■■■□□ 2.85
LTN1O94822 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
LTN1O94822 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC32.83■■■□□ 2.85
LTN1O94822 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC32.83■■■□□ 2.85
LTN1O94822 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC32.82■■■□□ 2.84
LTN1O94822 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC32.81■■■□□ 2.84
LTN1O94822 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC32.81■■■□□ 2.84
LTN1O94822 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC32.81■■■□□ 2.84
LTN1O94822 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC32.81■■■□□ 2.84
LTN1O94822 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
LTN1O94822 RPS2P7-201ENST00000447334 885 ntBASIC32.81■■■□□ 2.84
LTN1O94822 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
LTN1O94822 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC32.8■■■□□ 2.84
LTN1O94822 LINC01003-201ENST00000564834 1764 ntBASIC32.8■■■□□ 2.84
LTN1O94822 TK2-216ENST00000564917 1156 ntTSL 3 BASIC32.79■■■□□ 2.84
LTN1O94822 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC32.78■■■□□ 2.84
LTN1O94822 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC32.78■■■□□ 2.84
LTN1O94822 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC32.78■■■□□ 2.84
LTN1O94822 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC32.78■■■□□ 2.84
LTN1O94822 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
LTN1O94822 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC32.78■■■□□ 2.84
LTN1O94822 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC32.78■■■□□ 2.84
LTN1O94822 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
LTN1O94822 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC32.78■■■□□ 2.84
LTN1O94822 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC32.77■■■□□ 2.84
LTN1O94822 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC32.77■■■□□ 2.84
LTN1O94822 RNF146-205ENST00000477776 762 ntTSL 3 BASIC32.77■■■□□ 2.84
LTN1O94822 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC32.77■■■□□ 2.84
LTN1O94822 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC32.77■■■□□ 2.84
LTN1O94822 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC32.75■■■□□ 2.83
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms