Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
PFDN1O60925 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
PFDN1O60925 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.92■■□□□ 1.1
PFDN1O60925 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
PFDN1O60925 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PFDN1O60925 AC092803.2-201ENST00000564287 1899 ntBASIC21.92■■□□□ 1.1
PFDN1O60925 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
PFDN1O60925 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.91■■□□□ 1.1
PFDN1O60925 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
PFDN1O60925 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
PFDN1O60925 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PFDN1O60925 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC21.91■■□□□ 1.1
PFDN1O60925 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PFDN1O60925 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.9■■□□□ 1.1
PFDN1O60925 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.9■■□□□ 1.1
PFDN1O60925 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PFDN1O60925 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PFDN1O60925 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
PFDN1O60925 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
PFDN1O60925 AL139125.2-201ENST00000623134 1869 ntBASIC21.89■■□□□ 1.09
PFDN1O60925 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PFDN1O60925 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.88■■□□□ 1.09
PFDN1O60925 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PFDN1O60925 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.88■■□□□ 1.09
PFDN1O60925 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
PFDN1O60925 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.87■■□□□ 1.09
PFDN1O60925 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PFDN1O60925 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PFDN1O60925 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
PFDN1O60925 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PFDN1O60925 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PFDN1O60925 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PFDN1O60925 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PFDN1O60925 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.86■■□□□ 1.09
PFDN1O60925 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
PFDN1O60925 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PFDN1O60925 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
PFDN1O60925 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
PFDN1O60925 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PFDN1O60925 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
PFDN1O60925 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.85■■□□□ 1.09
PFDN1O60925 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PFDN1O60925 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.84■■□□□ 1.09
PFDN1O60925 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PFDN1O60925 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
PFDN1O60925 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PFDN1O60925 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
PFDN1O60925 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PFDN1O60925 AC142381.3-201ENST00000568208 1670 ntBASIC21.83■■□□□ 1.09
PFDN1O60925 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.83■■□□□ 1.09
PFDN1O60925 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC21.83■■□□□ 1.08
PFDN1O60925 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
PFDN1O60925 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
PFDN1O60925 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC21.82■■□□□ 1.08
PFDN1O60925 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PFDN1O60925 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.82■■□□□ 1.08
PFDN1O60925 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC21.82■■□□□ 1.08
PFDN1O60925 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PFDN1O60925 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
PFDN1O60925 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.82■■□□□ 1.08
PFDN1O60925 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PFDN1O60925 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
PFDN1O60925 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.81■■□□□ 1.08
PFDN1O60925 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PFDN1O60925 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
PFDN1O60925 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
PFDN1O60925 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
PFDN1O60925 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
PFDN1O60925 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
PFDN1O60925 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PFDN1O60925 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PFDN1O60925 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PFDN1O60925 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC21.8■■□□□ 1.08
PFDN1O60925 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
PFDN1O60925 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PFDN1O60925 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PFDN1O60925 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PFDN1O60925 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PFDN1O60925 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PFDN1O60925 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
PFDN1O60925 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.78■■□□□ 1.08
PFDN1O60925 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PFDN1O60925 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PFDN1O60925 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC21.78■■□□□ 1.08
PFDN1O60925 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PFDN1O60925 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PFDN1O60925 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.78■■□□□ 1.08
PFDN1O60925 C9orf163-202ENST00000624034 2573 ntBASIC21.78■■□□□ 1.08
PFDN1O60925 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PFDN1O60925 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PFDN1O60925 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PFDN1O60925 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PFDN1O60925 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC21.76■■□□□ 1.07
PFDN1O60925 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PFDN1O60925 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PFDN1O60925 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PFDN1O60925 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PFDN1O60925 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
PFDN1O60925 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PFDN1O60925 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms