Protein–RNA interactions for Protein: O60341

KDM1A, Lysine-specific histone demethylase 1A, humanhuman

Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1AO60341 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC23.79■■□□□ 1.4
KDM1AO60341 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
KDM1AO60341 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
KDM1AO60341 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
KDM1AO60341 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
KDM1AO60341 GFER-205ENST00000569451 517 ntTSL 5 BASIC23.78■■□□□ 1.4
KDM1AO60341 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC23.78■■□□□ 1.4
KDM1AO60341 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
KDM1AO60341 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC23.77■■□□□ 1.4
KDM1AO60341 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
KDM1AO60341 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC23.77■■□□□ 1.4
KDM1AO60341 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
KDM1AO60341 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
KDM1AO60341 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC23.77■■□□□ 1.4
KDM1AO60341 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
KDM1AO60341 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
KDM1AO60341 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
KDM1AO60341 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
KDM1AO60341 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
KDM1AO60341 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
KDM1AO60341 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
KDM1AO60341 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
KDM1AO60341 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
KDM1AO60341 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC23.75■■□□□ 1.39
KDM1AO60341 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
KDM1AO60341 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC23.74■■□□□ 1.39
KDM1AO60341 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
KDM1AO60341 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
KDM1AO60341 HYI-213ENST00000583037 1322 ntTSL 5 BASIC23.73■■□□□ 1.39
KDM1AO60341 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
KDM1AO60341 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC23.73■■□□□ 1.39
KDM1AO60341 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC23.73■■□□□ 1.39
KDM1AO60341 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC23.73■■□□□ 1.39
KDM1AO60341 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC23.72■■□□□ 1.39
KDM1AO60341 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC23.72■■□□□ 1.39
KDM1AO60341 HES4-204ENST00000484667 667 ntTSL 3 BASIC23.72■■□□□ 1.39
KDM1AO60341 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
KDM1AO60341 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC23.72■■□□□ 1.39
KDM1AO60341 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
KDM1AO60341 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
KDM1AO60341 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
KDM1AO60341 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC23.72■■□□□ 1.39
KDM1AO60341 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC23.72■■□□□ 1.39
KDM1AO60341 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
KDM1AO60341 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC23.71■■□□□ 1.39
KDM1AO60341 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC23.71■■□□□ 1.39
KDM1AO60341 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC23.71■■□□□ 1.39
KDM1AO60341 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
KDM1AO60341 AC093536.1-201ENST00000569153 554 ntBASIC23.71■■□□□ 1.39
KDM1AO60341 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC23.71■■□□□ 1.39
KDM1AO60341 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC23.71■■□□□ 1.39
KDM1AO60341 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
KDM1AO60341 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
KDM1AO60341 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC23.7■■□□□ 1.38
KDM1AO60341 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
KDM1AO60341 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
KDM1AO60341 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
KDM1AO60341 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
KDM1AO60341 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
KDM1AO60341 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
KDM1AO60341 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC23.69■■□□□ 1.38
KDM1AO60341 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
KDM1AO60341 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC23.68■■□□□ 1.38
KDM1AO60341 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
KDM1AO60341 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC23.68■■□□□ 1.38
KDM1AO60341 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
KDM1AO60341 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC23.67■■□□□ 1.38
KDM1AO60341 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
KDM1AO60341 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
KDM1AO60341 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
KDM1AO60341 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
KDM1AO60341 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
KDM1AO60341 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
KDM1AO60341 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC23.66■■□□□ 1.38
KDM1AO60341 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
KDM1AO60341 NTF6A-201ENST00000591175 560 ntBASIC23.65■■□□□ 1.38
KDM1AO60341 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC23.65■■□□□ 1.38
KDM1AO60341 AC133552.2-201ENST00000619106 1032 ntBASIC23.65■■□□□ 1.38
KDM1AO60341 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
KDM1AO60341 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
KDM1AO60341 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC23.65■■□□□ 1.38
KDM1AO60341 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC23.65■■□□□ 1.38
KDM1AO60341 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
KDM1AO60341 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
KDM1AO60341 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC23.64■■□□□ 1.37
KDM1AO60341 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
KDM1AO60341 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.37
KDM1AO60341 AC026202.3-201ENST00000600805 1127 ntBASIC23.64■■□□□ 1.37
KDM1AO60341 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC23.64■■□□□ 1.37
KDM1AO60341 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC23.64■■□□□ 1.37
KDM1AO60341 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC23.64■■□□□ 1.37
KDM1AO60341 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
KDM1AO60341 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
KDM1AO60341 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
KDM1AO60341 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
KDM1AO60341 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
KDM1AO60341 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
KDM1AO60341 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC23.63■■□□□ 1.37
KDM1AO60341 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
KDM1AO60341 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms