Protein–RNA interactions for Protein: A6NEE1

PLEKHD1, Pleckstrin homology domain-containing family D member 1, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHD1A6NEE1 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC38.32■■■■□ 3.72
PLEKHD1A6NEE1 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC38.32■■■■□ 3.72
PLEKHD1A6NEE1 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC38.31■■■■□ 3.72
PLEKHD1A6NEE1 TK2-216ENST00000564917 1156 ntTSL 3 BASIC38.31■■■■□ 3.72
PLEKHD1A6NEE1 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC38.3■■■■□ 3.72
PLEKHD1A6NEE1 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC38.3■■■■□ 3.72
PLEKHD1A6NEE1 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC38.3■■■■□ 3.72
PLEKHD1A6NEE1 Z92544.1-202ENST00000571933 1220 ntBASIC38.3■■■■□ 3.72
PLEKHD1A6NEE1 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC38.3■■■■□ 3.72
PLEKHD1A6NEE1 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC38.3■■■■□ 3.72
PLEKHD1A6NEE1 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC38.3■■■■□ 3.72
PLEKHD1A6NEE1 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC38.29■■■■□ 3.72
PLEKHD1A6NEE1 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC38.29■■■■□ 3.72
PLEKHD1A6NEE1 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC38.29■■■■□ 3.72
PLEKHD1A6NEE1 LONRF2P2-201ENST00000439212 571 ntBASIC38.29■■■■□ 3.72
PLEKHD1A6NEE1 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC38.29■■■■□ 3.72
PLEKHD1A6NEE1 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC38.28■■■■□ 3.72
PLEKHD1A6NEE1 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC38.28■■■■□ 3.72
PLEKHD1A6NEE1 RPS2P7-201ENST00000447334 885 ntBASIC38.28■■■■□ 3.72
PLEKHD1A6NEE1 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC38.27■■■■□ 3.72
PLEKHD1A6NEE1 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC38.27■■■■□ 3.72
PLEKHD1A6NEE1 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC38.27■■■■□ 3.72
PLEKHD1A6NEE1 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC38.27■■■■□ 3.72
PLEKHD1A6NEE1 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC38.27■■■■□ 3.72
PLEKHD1A6NEE1 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC38.26■■■■□ 3.72
PLEKHD1A6NEE1 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC38.25■■■■□ 3.71
PLEKHD1A6NEE1 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC38.25■■■■□ 3.71
PLEKHD1A6NEE1 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC38.25■■■■□ 3.71
PLEKHD1A6NEE1 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC38.24■■■■□ 3.71
PLEKHD1A6NEE1 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC38.24■■■■□ 3.71
PLEKHD1A6NEE1 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC38.24■■■■□ 3.71
PLEKHD1A6NEE1 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC38.23■■■■□ 3.71
PLEKHD1A6NEE1 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC38.23■■■■□ 3.71
PLEKHD1A6NEE1 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC38.23■■■■□ 3.71
PLEKHD1A6NEE1 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC38.23■■■■□ 3.71
PLEKHD1A6NEE1 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC38.23■■■■□ 3.71
PLEKHD1A6NEE1 CREM-229ENST00000474362 1030 ntTSL 2 BASIC38.22■■■■□ 3.71
PLEKHD1A6NEE1 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC38.22■■■■□ 3.71
PLEKHD1A6NEE1 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC38.22■■■■□ 3.71
PLEKHD1A6NEE1 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC38.22■■■■□ 3.71
PLEKHD1A6NEE1 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC38.22■■■■□ 3.71
PLEKHD1A6NEE1 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC38.21■■■■□ 3.71
PLEKHD1A6NEE1 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC38.2■■■■□ 3.71
PLEKHD1A6NEE1 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC38.2■■■■□ 3.71
PLEKHD1A6NEE1 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC38.19■■■■□ 3.7
PLEKHD1A6NEE1 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC38.19■■■■□ 3.7
PLEKHD1A6NEE1 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC38.19■■■■□ 3.7
PLEKHD1A6NEE1 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC38.19■■■■□ 3.7
PLEKHD1A6NEE1 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC38.18■■■■□ 3.7
PLEKHD1A6NEE1 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC38.18■■■■□ 3.7
PLEKHD1A6NEE1 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC38.18■■■■□ 3.7
PLEKHD1A6NEE1 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC38.17■■■■□ 3.7
PLEKHD1A6NEE1 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC38.16■■■■□ 3.7
PLEKHD1A6NEE1 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC38.16■■■■□ 3.7
PLEKHD1A6NEE1 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC38.15■■■■□ 3.7
PLEKHD1A6NEE1 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC38.15■■■■□ 3.7
PLEKHD1A6NEE1 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC38.15■■■■□ 3.7
PLEKHD1A6NEE1 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC38.15■■■■□ 3.7
PLEKHD1A6NEE1 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC38.15■■■■□ 3.7
PLEKHD1A6NEE1 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC38.14■■■■□ 3.7
PLEKHD1A6NEE1 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC38.14■■■■□ 3.7
PLEKHD1A6NEE1 LSM7-203ENST00000585409 512 ntTSL 2 BASIC38.13■■■■□ 3.69
PLEKHD1A6NEE1 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC38.13■■■■□ 3.69
PLEKHD1A6NEE1 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC38.12■■■■□ 3.69
PLEKHD1A6NEE1 GRAMD4P7-201ENST00000578182 1232 ntBASIC38.12■■■■□ 3.69
PLEKHD1A6NEE1 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC38.11■■■■□ 3.69
PLEKHD1A6NEE1 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC38.1■■■■□ 3.69
PLEKHD1A6NEE1 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC38.1■■■■□ 3.69
PLEKHD1A6NEE1 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC38.1■■■■□ 3.69
PLEKHD1A6NEE1 AC008406.3-201ENST00000620001 1374 ntBASIC38.09■■■■□ 3.69
PLEKHD1A6NEE1 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC38.09■■■■□ 3.69
PLEKHD1A6NEE1 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC38.09■■■■□ 3.69
PLEKHD1A6NEE1 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC38.09■■■■□ 3.69
PLEKHD1A6NEE1 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC38.08■■■■□ 3.69
PLEKHD1A6NEE1 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC38.08■■■■□ 3.69
PLEKHD1A6NEE1 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC38.08■■■■□ 3.69
PLEKHD1A6NEE1 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC38.08■■■■□ 3.69
PLEKHD1A6NEE1 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC38.08■■■■□ 3.69
PLEKHD1A6NEE1 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC38.07■■■■□ 3.68
PLEKHD1A6NEE1 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC38.07■■■■□ 3.68
PLEKHD1A6NEE1 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC38.07■■■■□ 3.68
PLEKHD1A6NEE1 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC38.06■■■■□ 3.68
PLEKHD1A6NEE1 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC38.06■■■■□ 3.68
PLEKHD1A6NEE1 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC38.05■■■■□ 3.68
PLEKHD1A6NEE1 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC38.05■■■■□ 3.68
PLEKHD1A6NEE1 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC38.05■■■■□ 3.68
PLEKHD1A6NEE1 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC38.05■■■■□ 3.68
PLEKHD1A6NEE1 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC38.05■■■■□ 3.68
PLEKHD1A6NEE1 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC38.05■■■■□ 3.68
PLEKHD1A6NEE1 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC38.05■■■■□ 3.68
PLEKHD1A6NEE1 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC38.05■■■■□ 3.68
PLEKHD1A6NEE1 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC38.04■■■■□ 3.68
PLEKHD1A6NEE1 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC38.04■■■■□ 3.68
PLEKHD1A6NEE1 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC38.03■■■■□ 3.68
PLEKHD1A6NEE1 KRT125P-201ENST00000546827 989 ntBASIC38.03■■■■□ 3.68
PLEKHD1A6NEE1 MIR4787-201ENST00000607364 84 ntBASIC38.03■■■■□ 3.68
PLEKHD1A6NEE1 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC38.03■■■■□ 3.68
PLEKHD1A6NEE1 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC38.03■■■■□ 3.68
PLEKHD1A6NEE1 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC38.02■■■■□ 3.68
PLEKHD1A6NEE1 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC38.02■■■■□ 3.68
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms