Protein–RNA interactions for Protein: A4QN01

LINC01553, Putative uncharacterized protein encoded by LINC01553, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01553A4QN01 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
LINC01553A4QN01 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
LINC01553A4QN01 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
LINC01553A4QN01 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC26.35■■□□□ 1.81
LINC01553A4QN01 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC26.35■■□□□ 1.81
LINC01553A4QN01 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC26.35■■□□□ 1.81
LINC01553A4QN01 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
LINC01553A4QN01 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
LINC01553A4QN01 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
LINC01553A4QN01 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
LINC01553A4QN01 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC26.34■■□□□ 1.81
LINC01553A4QN01 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
LINC01553A4QN01 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
LINC01553A4QN01 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
LINC01553A4QN01 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
LINC01553A4QN01 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
LINC01553A4QN01 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
LINC01553A4QN01 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC26.33■■□□□ 1.81
LINC01553A4QN01 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.8
LINC01553A4QN01 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC26.32■■□□□ 1.8
LINC01553A4QN01 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
LINC01553A4QN01 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
LINC01553A4QN01 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC26.32■■□□□ 1.8
LINC01553A4QN01 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
LINC01553A4QN01 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
LINC01553A4QN01 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
LINC01553A4QN01 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
LINC01553A4QN01 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
LINC01553A4QN01 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
LINC01553A4QN01 PEMT-206ENST00000435340 960 ntTSL 5 BASIC26.31■■□□□ 1.8
LINC01553A4QN01 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC26.31■■□□□ 1.8
LINC01553A4QN01 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
LINC01553A4QN01 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
LINC01553A4QN01 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
LINC01553A4QN01 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC26.3■■□□□ 1.8
LINC01553A4QN01 WHAMMP3-201ENST00000611636 1609 ntBASIC26.3■■□□□ 1.8
LINC01553A4QN01 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
LINC01553A4QN01 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
LINC01553A4QN01 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
LINC01553A4QN01 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
LINC01553A4QN01 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
LINC01553A4QN01 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
LINC01553A4QN01 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
LINC01553A4QN01 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
LINC01553A4QN01 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
LINC01553A4QN01 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
LINC01553A4QN01 KRT125P-201ENST00000546827 989 ntBASIC26.29■■□□□ 1.8
LINC01553A4QN01 MIR4787-201ENST00000607364 84 ntBASIC26.29■■□□□ 1.8
LINC01553A4QN01 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC26.29■■□□□ 1.8
LINC01553A4QN01 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
LINC01553A4QN01 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
LINC01553A4QN01 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC26.28■■□□□ 1.8
LINC01553A4QN01 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
LINC01553A4QN01 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
LINC01553A4QN01 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC26.27■■□□□ 1.8
LINC01553A4QN01 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC26.27■■□□□ 1.8
LINC01553A4QN01 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC26.27■■□□□ 1.8
LINC01553A4QN01 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
LINC01553A4QN01 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
LINC01553A4QN01 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
LINC01553A4QN01 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC26.26■■□□□ 1.79
LINC01553A4QN01 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
LINC01553A4QN01 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC26.25■■□□□ 1.79
LINC01553A4QN01 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
LINC01553A4QN01 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC26.25■■□□□ 1.79
LINC01553A4QN01 UNC93B8-201ENST00000511903 705 ntBASIC26.25■■□□□ 1.79
LINC01553A4QN01 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC26.25■■□□□ 1.79
LINC01553A4QN01 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC26.25■■□□□ 1.79
LINC01553A4QN01 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC26.24■■□□□ 1.79
LINC01553A4QN01 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
LINC01553A4QN01 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC26.24■■□□□ 1.79
LINC01553A4QN01 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
LINC01553A4QN01 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
LINC01553A4QN01 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
LINC01553A4QN01 BX664725.1-201ENST00000438252 379 ntBASIC26.24■■□□□ 1.79
LINC01553A4QN01 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC26.24■■□□□ 1.79
LINC01553A4QN01 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC26.24■■□□□ 1.79
LINC01553A4QN01 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
LINC01553A4QN01 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
LINC01553A4QN01 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC26.23■■□□□ 1.79
LINC01553A4QN01 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
LINC01553A4QN01 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC26.22■■□□□ 1.79
LINC01553A4QN01 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC26.22■■□□□ 1.79
LINC01553A4QN01 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
LINC01553A4QN01 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC26.22■■□□□ 1.79
LINC01553A4QN01 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
LINC01553A4QN01 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
LINC01553A4QN01 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC26.21■■□□□ 1.79
LINC01553A4QN01 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC26.21■■□□□ 1.79
LINC01553A4QN01 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC26.21■■□□□ 1.79
LINC01553A4QN01 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC26.2■■□□□ 1.79
LINC01553A4QN01 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC26.2■■□□□ 1.78
LINC01553A4QN01 KRT16P3-201ENST00000439127 1283 ntBASIC26.2■■□□□ 1.78
LINC01553A4QN01 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC26.2■■□□□ 1.78
LINC01553A4QN01 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC26.2■■□□□ 1.78
LINC01553A4QN01 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
LINC01553A4QN01 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
LINC01553A4QN01 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
LINC01553A4QN01 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
LINC01553A4QN01 MIR638-201ENST00000385237 100 ntBASIC26.19■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms