Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC23.35■■□□□ 1.33
AP4B1Q9Y6B7 LINC01971-201ENST00000617888 1048 ntBASIC23.35■■□□□ 1.33
AP4B1Q9Y6B7 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
AP4B1Q9Y6B7 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
AP4B1Q9Y6B7 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC23.34■■□□□ 1.33
AP4B1Q9Y6B7 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC23.34■■□□□ 1.33
AP4B1Q9Y6B7 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC23.33■■□□□ 1.33
AP4B1Q9Y6B7 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC23.33■■□□□ 1.33
AP4B1Q9Y6B7 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
AP4B1Q9Y6B7 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.32
AP4B1Q9Y6B7 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.32
AP4B1Q9Y6B7 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC23.33■■□□□ 1.32
AP4B1Q9Y6B7 AP002414.2-202ENST00000590929 1450 ntBASIC23.32■■□□□ 1.32
AP4B1Q9Y6B7 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
AP4B1Q9Y6B7 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
AP4B1Q9Y6B7 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
AP4B1Q9Y6B7 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
AP4B1Q9Y6B7 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
AP4B1Q9Y6B7 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
AP4B1Q9Y6B7 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
AP4B1Q9Y6B7 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
AP4B1Q9Y6B7 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
AP4B1Q9Y6B7 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
AP4B1Q9Y6B7 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
AP4B1Q9Y6B7 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
AP4B1Q9Y6B7 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC23.3■■□□□ 1.32
AP4B1Q9Y6B7 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
AP4B1Q9Y6B7 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
AP4B1Q9Y6B7 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC23.29■■□□□ 1.32
AP4B1Q9Y6B7 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
AP4B1Q9Y6B7 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
AP4B1Q9Y6B7 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
AP4B1Q9Y6B7 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC23.28■■□□□ 1.32
AP4B1Q9Y6B7 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC23.28■■□□□ 1.32
AP4B1Q9Y6B7 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
AP4B1Q9Y6B7 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
AP4B1Q9Y6B7 ERN1-208ENST00000606895 2068 ntBASIC23.28■■□□□ 1.32
AP4B1Q9Y6B7 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
AP4B1Q9Y6B7 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
AP4B1Q9Y6B7 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
AP4B1Q9Y6B7 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
AP4B1Q9Y6B7 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
AP4B1Q9Y6B7 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
AP4B1Q9Y6B7 DUX4L11-201ENST00000611504 1267 ntBASIC23.26■■□□□ 1.31
AP4B1Q9Y6B7 DUX4L12-201ENST00000614593 1267 ntBASIC23.26■■□□□ 1.31
AP4B1Q9Y6B7 DUX4L14-201ENST00000621227 1267 ntBASIC23.26■■□□□ 1.31
AP4B1Q9Y6B7 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
AP4B1Q9Y6B7 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
AP4B1Q9Y6B7 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
AP4B1Q9Y6B7 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
AP4B1Q9Y6B7 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
AP4B1Q9Y6B7 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
AP4B1Q9Y6B7 AC135983.2-203ENST00000454486 1613 ntBASIC23.24■■□□□ 1.31
AP4B1Q9Y6B7 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
AP4B1Q9Y6B7 PVT1-219ENST00000523427 938 ntTSL 3 BASIC23.24■■□□□ 1.31
AP4B1Q9Y6B7 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
AP4B1Q9Y6B7 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
AP4B1Q9Y6B7 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
AP4B1Q9Y6B7 AGPS-202ENST00000409888 815 ntTSL 4 BASIC23.22■■□□□ 1.31
AP4B1Q9Y6B7 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
AP4B1Q9Y6B7 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC23.22■■□□□ 1.31
AP4B1Q9Y6B7 RNF166-209ENST00000567844 633 ntTSL 5 BASIC23.22■■□□□ 1.31
AP4B1Q9Y6B7 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
AP4B1Q9Y6B7 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
AP4B1Q9Y6B7 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
AP4B1Q9Y6B7 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC23.21■■□□□ 1.31
AP4B1Q9Y6B7 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
AP4B1Q9Y6B7 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
AP4B1Q9Y6B7 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
AP4B1Q9Y6B7 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
AP4B1Q9Y6B7 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
AP4B1Q9Y6B7 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
AP4B1Q9Y6B7 MACF1-219ENST00000484793 834 ntTSL 2 BASIC23.2■■□□□ 1.3
AP4B1Q9Y6B7 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC23.2■■□□□ 1.3
AP4B1Q9Y6B7 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
AP4B1Q9Y6B7 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
AP4B1Q9Y6B7 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
AP4B1Q9Y6B7 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
AP4B1Q9Y6B7 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC23.19■■□□□ 1.3
AP4B1Q9Y6B7 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
AP4B1Q9Y6B7 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC23.19■■□□□ 1.3
AP4B1Q9Y6B7 AC133561.1-201ENST00000568600 2415 ntBASIC23.19■■□□□ 1.3
AP4B1Q9Y6B7 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC23.18■■□□□ 1.3
AP4B1Q9Y6B7 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
AP4B1Q9Y6B7 DUX4L13-201ENST00000554103 1267 ntBASIC23.18■■□□□ 1.3
AP4B1Q9Y6B7 DUX4L15-201ENST00000611059 1267 ntBASIC23.18■■□□□ 1.3
AP4B1Q9Y6B7 DUX4L23-201ENST00000615195 1269 ntBASIC23.18■■□□□ 1.3
AP4B1Q9Y6B7 DUX4L24-201ENST00000617576 1269 ntBASIC23.18■■□□□ 1.3
AP4B1Q9Y6B7 DUX4L22-201ENST00000618238 1269 ntBASIC23.18■■□□□ 1.3
AP4B1Q9Y6B7 DUX4L20-201ENST00000619712 1269 ntBASIC23.18■■□□□ 1.3
AP4B1Q9Y6B7 DUX4L21-201ENST00000622058 1269 ntBASIC23.18■■□□□ 1.3
AP4B1Q9Y6B7 DUX4L10-201ENST00000622460 1267 ntBASIC23.18■■□□□ 1.3
AP4B1Q9Y6B7 DUX4L25-201ENST00000624915 1269 ntBASIC23.18■■□□□ 1.3
AP4B1Q9Y6B7 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC23.18■■□□□ 1.3
AP4B1Q9Y6B7 WHAMMP2-203ENST00000563942 1603 ntBASIC23.18■■□□□ 1.3
AP4B1Q9Y6B7 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
AP4B1Q9Y6B7 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
AP4B1Q9Y6B7 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
AP4B1Q9Y6B7 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
AP4B1Q9Y6B7 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC23.17■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms