Protein–RNA interactions for Protein: Q9Y5T5

USP16, Ubiquitin carboxyl-terminal hydrolase 16, humanhuman

Predictions only

Length 823 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP16Q9Y5T5 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC31.7■■■□□ 2.66
USP16Q9Y5T5 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC31.69■■■□□ 2.66
USP16Q9Y5T5 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC31.69■■■□□ 2.66
USP16Q9Y5T5 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
USP16Q9Y5T5 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC31.68■■■□□ 2.66
USP16Q9Y5T5 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC31.68■■■□□ 2.66
USP16Q9Y5T5 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
USP16Q9Y5T5 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC31.68■■■□□ 2.66
USP16Q9Y5T5 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
USP16Q9Y5T5 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
USP16Q9Y5T5 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC31.67■■■□□ 2.66
USP16Q9Y5T5 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC31.67■■■□□ 2.66
USP16Q9Y5T5 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
USP16Q9Y5T5 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC31.67■■■□□ 2.66
USP16Q9Y5T5 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
USP16Q9Y5T5 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC31.66■■■□□ 2.66
USP16Q9Y5T5 AC010980.1-201ENST00000587192 1142 ntBASIC31.65■■■□□ 2.66
USP16Q9Y5T5 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
USP16Q9Y5T5 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC31.65■■■□□ 2.66
USP16Q9Y5T5 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC31.65■■■□□ 2.66
USP16Q9Y5T5 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC31.64■■■□□ 2.66
USP16Q9Y5T5 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC31.64■■■□□ 2.66
USP16Q9Y5T5 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC31.64■■■□□ 2.66
USP16Q9Y5T5 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC31.64■■■□□ 2.66
USP16Q9Y5T5 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
USP16Q9Y5T5 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC31.64■■■□□ 2.66
USP16Q9Y5T5 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC31.64■■■□□ 2.65
USP16Q9Y5T5 MIR6765-201ENST00000614092 87 ntBASIC31.63■■■□□ 2.65
USP16Q9Y5T5 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC31.63■■■□□ 2.65
USP16Q9Y5T5 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
USP16Q9Y5T5 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
USP16Q9Y5T5 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC31.61■■■□□ 2.65
USP16Q9Y5T5 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC31.61■■■□□ 2.65
USP16Q9Y5T5 BHLHE23-202ENST00000612929 1109 ntBASIC31.61■■■□□ 2.65
USP16Q9Y5T5 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC31.61■■■□□ 2.65
USP16Q9Y5T5 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
USP16Q9Y5T5 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC31.6■■■□□ 2.65
USP16Q9Y5T5 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
USP16Q9Y5T5 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
USP16Q9Y5T5 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC31.6■■■□□ 2.65
USP16Q9Y5T5 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
USP16Q9Y5T5 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC31.59■■■□□ 2.65
USP16Q9Y5T5 PVT1_1.1-201ENST00000615125 194 ntBASIC31.59■■■□□ 2.65
USP16Q9Y5T5 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC31.59■■■□□ 2.65
USP16Q9Y5T5 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC31.59■■■□□ 2.65
USP16Q9Y5T5 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
USP16Q9Y5T5 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC31.59■■■□□ 2.65
USP16Q9Y5T5 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC31.59■■■□□ 2.65
USP16Q9Y5T5 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC31.58■■■□□ 2.65
USP16Q9Y5T5 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
USP16Q9Y5T5 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC31.57■■■□□ 2.64
USP16Q9Y5T5 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
USP16Q9Y5T5 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC31.57■■■□□ 2.64
USP16Q9Y5T5 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC31.57■■■□□ 2.64
USP16Q9Y5T5 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
USP16Q9Y5T5 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
USP16Q9Y5T5 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
USP16Q9Y5T5 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
USP16Q9Y5T5 AC018755.3-202ENST00000596210 929 ntBASIC31.56■■■□□ 2.64
USP16Q9Y5T5 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
USP16Q9Y5T5 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC31.55■■■□□ 2.64
USP16Q9Y5T5 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
USP16Q9Y5T5 BEX3-202ENST00000372634 753 ntTSL 2 BASIC31.55■■■□□ 2.64
USP16Q9Y5T5 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
USP16Q9Y5T5 AL451085.2-201ENST00000605085 799 ntBASIC31.55■■■□□ 2.64
USP16Q9Y5T5 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
USP16Q9Y5T5 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC31.54■■■□□ 2.64
USP16Q9Y5T5 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
USP16Q9Y5T5 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
USP16Q9Y5T5 AC103834.1-201ENST00000520383 144 ntBASIC31.53■■■□□ 2.64
USP16Q9Y5T5 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC31.53■■■□□ 2.64
USP16Q9Y5T5 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC31.53■■■□□ 2.64
USP16Q9Y5T5 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC31.53■■■□□ 2.64
USP16Q9Y5T5 AC074183.2-201ENST00000623112 922 ntBASIC31.53■■■□□ 2.64
USP16Q9Y5T5 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC31.53■■■□□ 2.64
USP16Q9Y5T5 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC31.53■■■□□ 2.64
USP16Q9Y5T5 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC31.53■■■□□ 2.64
USP16Q9Y5T5 KRT8P33-201ENST00000508125 1423 ntBASIC31.52■■■□□ 2.64
USP16Q9Y5T5 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC31.52■■■□□ 2.64
USP16Q9Y5T5 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC31.52■■■□□ 2.64
USP16Q9Y5T5 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC31.52■■■□□ 2.64
USP16Q9Y5T5 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC31.51■■■□□ 2.64
USP16Q9Y5T5 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC31.51■■■□□ 2.63
USP16Q9Y5T5 AL449106.1-201ENST00000608517 1980 ntBASIC31.5■■■□□ 2.63
USP16Q9Y5T5 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC31.5■■■□□ 2.63
USP16Q9Y5T5 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
USP16Q9Y5T5 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC31.5■■■□□ 2.63
USP16Q9Y5T5 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC31.5■■■□□ 2.63
USP16Q9Y5T5 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC31.49■■■□□ 2.63
USP16Q9Y5T5 AC139795.1-202ENST00000500444 432 ntBASIC31.49■■■□□ 2.63
USP16Q9Y5T5 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC31.49■■■□□ 2.63
USP16Q9Y5T5 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
USP16Q9Y5T5 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
USP16Q9Y5T5 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC31.48■■■□□ 2.63
USP16Q9Y5T5 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC31.48■■■□□ 2.63
USP16Q9Y5T5 IDNK-203ENST00000405990 629 ntTSL 2 BASIC31.48■■■□□ 2.63
USP16Q9Y5T5 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
USP16Q9Y5T5 AL035685.1-201ENST00000636663 812 ntBASIC31.48■■■□□ 2.63
USP16Q9Y5T5 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC31.47■■■□□ 2.63
USP16Q9Y5T5 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC31.47■■■□□ 2.63
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms