Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
HRH3Q9Y5N1 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
HRH3Q9Y5N1 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
HRH3Q9Y5N1 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
HRH3Q9Y5N1 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
HRH3Q9Y5N1 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
HRH3Q9Y5N1 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
HRH3Q9Y5N1 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
HRH3Q9Y5N1 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC22.58■■□□□ 1.21
HRH3Q9Y5N1 AL033527.3-201ENST00000566366 1196 ntBASIC22.58■■□□□ 1.21
HRH3Q9Y5N1 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
HRH3Q9Y5N1 ECEL1P2-201ENST00000461596 1295 ntBASIC22.57■■□□□ 1.2
HRH3Q9Y5N1 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
HRH3Q9Y5N1 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
HRH3Q9Y5N1 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC22.57■■□□□ 1.2
HRH3Q9Y5N1 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
HRH3Q9Y5N1 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC22.56■■□□□ 1.2
HRH3Q9Y5N1 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
HRH3Q9Y5N1 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
HRH3Q9Y5N1 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC22.56■■□□□ 1.2
HRH3Q9Y5N1 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
HRH3Q9Y5N1 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
HRH3Q9Y5N1 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
HRH3Q9Y5N1 SHF-208ENST00000560734 1731 ntTSL 3 BASIC22.55■■□□□ 1.2
HRH3Q9Y5N1 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
HRH3Q9Y5N1 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
HRH3Q9Y5N1 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
HRH3Q9Y5N1 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC22.55■■□□□ 1.2
HRH3Q9Y5N1 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
HRH3Q9Y5N1 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
HRH3Q9Y5N1 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
HRH3Q9Y5N1 AC126177.7-201ENST00000547904 679 ntBASIC22.54■■□□□ 1.2
HRH3Q9Y5N1 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC22.54■■□□□ 1.2
HRH3Q9Y5N1 KRT18P60-201ENST00000312876 1297 ntBASIC22.53■■□□□ 1.2
HRH3Q9Y5N1 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
HRH3Q9Y5N1 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
HRH3Q9Y5N1 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
HRH3Q9Y5N1 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
HRH3Q9Y5N1 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
HRH3Q9Y5N1 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
HRH3Q9Y5N1 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
HRH3Q9Y5N1 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC22.52■■□□□ 1.2
HRH3Q9Y5N1 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
HRH3Q9Y5N1 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
HRH3Q9Y5N1 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC22.51■■□□□ 1.19
HRH3Q9Y5N1 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
HRH3Q9Y5N1 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
HRH3Q9Y5N1 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC22.5■■□□□ 1.19
HRH3Q9Y5N1 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
HRH3Q9Y5N1 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC22.5■■□□□ 1.19
HRH3Q9Y5N1 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
HRH3Q9Y5N1 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC22.5■■□□□ 1.19
HRH3Q9Y5N1 AL359504.2-201ENST00000605506 1601 ntBASIC22.49■■□□□ 1.19
HRH3Q9Y5N1 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
HRH3Q9Y5N1 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
HRH3Q9Y5N1 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC22.49■■□□□ 1.19
HRH3Q9Y5N1 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
HRH3Q9Y5N1 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
HRH3Q9Y5N1 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
HRH3Q9Y5N1 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC22.47■■□□□ 1.19
HRH3Q9Y5N1 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
HRH3Q9Y5N1 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
HRH3Q9Y5N1 AC004987.1-201ENST00000428627 508 ntBASIC22.47■■□□□ 1.19
HRH3Q9Y5N1 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
HRH3Q9Y5N1 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC22.46■■□□□ 1.19
HRH3Q9Y5N1 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC22.46■■□□□ 1.19
HRH3Q9Y5N1 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
HRH3Q9Y5N1 GFER-205ENST00000569451 517 ntTSL 5 BASIC22.46■■□□□ 1.19
HRH3Q9Y5N1 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
HRH3Q9Y5N1 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC22.46■■□□□ 1.19
HRH3Q9Y5N1 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
HRH3Q9Y5N1 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
HRH3Q9Y5N1 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
HRH3Q9Y5N1 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC22.45■■□□□ 1.18
HRH3Q9Y5N1 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
HRH3Q9Y5N1 AC025884.2-201ENST00000553429 711 ntBASIC22.45■■□□□ 1.18
HRH3Q9Y5N1 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
HRH3Q9Y5N1 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC22.45■■□□□ 1.18
HRH3Q9Y5N1 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
HRH3Q9Y5N1 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
HRH3Q9Y5N1 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC22.44■■□□□ 1.18
HRH3Q9Y5N1 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
HRH3Q9Y5N1 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
HRH3Q9Y5N1 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
HRH3Q9Y5N1 ATP5G2P3-201ENST00000429083 425 ntBASIC22.44■■□□□ 1.18
HRH3Q9Y5N1 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC22.44■■□□□ 1.18
HRH3Q9Y5N1 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC22.44■■□□□ 1.18
HRH3Q9Y5N1 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC22.44■■□□□ 1.18
HRH3Q9Y5N1 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
HRH3Q9Y5N1 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
HRH3Q9Y5N1 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC22.43■■□□□ 1.18
HRH3Q9Y5N1 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
HRH3Q9Y5N1 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC22.43■■□□□ 1.18
HRH3Q9Y5N1 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC22.43■■□□□ 1.18
HRH3Q9Y5N1 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC22.43■■□□□ 1.18
HRH3Q9Y5N1 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
HRH3Q9Y5N1 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
HRH3Q9Y5N1 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
HRH3Q9Y5N1 TSPY13P-201ENST00000338964 914 ntBASIC22.42■■□□□ 1.18
HRH3Q9Y5N1 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms