Protein–RNA interactions for Protein: Q9Y5I0

PCDHA13, Protocadherin alpha-13, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13Q9Y5I0 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC26.21■■□□□ 1.79
PCDHA13Q9Y5I0 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC26.2■■□□□ 1.79
PCDHA13Q9Y5I0 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
PCDHA13Q9Y5I0 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC26.2■■□□□ 1.78
PCDHA13Q9Y5I0 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
PCDHA13Q9Y5I0 ERN1-208ENST00000606895 2068 ntBASIC26.19■■□□□ 1.78
PCDHA13Q9Y5I0 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
PCDHA13Q9Y5I0 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC26.19■■□□□ 1.78
PCDHA13Q9Y5I0 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
PCDHA13Q9Y5I0 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
PCDHA13Q9Y5I0 SNAI3-AS1-204ENST00000567997 2048 ntBASIC26.19■■□□□ 1.78
PCDHA13Q9Y5I0 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC26.18■■□□□ 1.78
PCDHA13Q9Y5I0 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
PCDHA13Q9Y5I0 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC26.18■■□□□ 1.78
PCDHA13Q9Y5I0 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
PCDHA13Q9Y5I0 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
PCDHA13Q9Y5I0 AC010501.1-201ENST00000606270 1962 ntBASIC26.17■■□□□ 1.78
PCDHA13Q9Y5I0 DUX4L29-201ENST00000425409 679 ntBASIC26.17■■□□□ 1.78
PCDHA13Q9Y5I0 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
PCDHA13Q9Y5I0 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC26.17■■□□□ 1.78
PCDHA13Q9Y5I0 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
PCDHA13Q9Y5I0 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
PCDHA13Q9Y5I0 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
PCDHA13Q9Y5I0 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
PCDHA13Q9Y5I0 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
PCDHA13Q9Y5I0 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
PCDHA13Q9Y5I0 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC26.15■■□□□ 1.78
PCDHA13Q9Y5I0 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
PCDHA13Q9Y5I0 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
PCDHA13Q9Y5I0 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
PCDHA13Q9Y5I0 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC26.14■■□□□ 1.78
PCDHA13Q9Y5I0 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC26.14■■□□□ 1.78
PCDHA13Q9Y5I0 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
PCDHA13Q9Y5I0 AC093323.1-202ENST00000635031 2045 ntBASIC26.14■■□□□ 1.77
PCDHA13Q9Y5I0 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
PCDHA13Q9Y5I0 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC26.14■■□□□ 1.77
PCDHA13Q9Y5I0 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC26.13■■□□□ 1.77
PCDHA13Q9Y5I0 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC26.13■■□□□ 1.77
PCDHA13Q9Y5I0 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC26.13■■□□□ 1.77
PCDHA13Q9Y5I0 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC26.13■■□□□ 1.77
PCDHA13Q9Y5I0 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC26.13■■□□□ 1.77
PCDHA13Q9Y5I0 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.77
PCDHA13Q9Y5I0 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC26.12■■□□□ 1.77
PCDHA13Q9Y5I0 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC26.12■■□□□ 1.77
PCDHA13Q9Y5I0 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC26.12■■□□□ 1.77
PCDHA13Q9Y5I0 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
PCDHA13Q9Y5I0 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
PCDHA13Q9Y5I0 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
PCDHA13Q9Y5I0 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
PCDHA13Q9Y5I0 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
PCDHA13Q9Y5I0 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC26.1■■□□□ 1.77
PCDHA13Q9Y5I0 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
PCDHA13Q9Y5I0 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
PCDHA13Q9Y5I0 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC26.09■■□□□ 1.77
PCDHA13Q9Y5I0 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
PCDHA13Q9Y5I0 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
PCDHA13Q9Y5I0 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
PCDHA13Q9Y5I0 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
PCDHA13Q9Y5I0 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC26.09■■□□□ 1.77
PCDHA13Q9Y5I0 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC26.08■■□□□ 1.77
PCDHA13Q9Y5I0 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
PCDHA13Q9Y5I0 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC26.08■■□□□ 1.77
PCDHA13Q9Y5I0 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC26.08■■□□□ 1.77
PCDHA13Q9Y5I0 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC26.08■■□□□ 1.77
PCDHA13Q9Y5I0 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
PCDHA13Q9Y5I0 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
PCDHA13Q9Y5I0 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC26.07■■□□□ 1.76
PCDHA13Q9Y5I0 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
PCDHA13Q9Y5I0 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
PCDHA13Q9Y5I0 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC26.07■■□□□ 1.76
PCDHA13Q9Y5I0 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
PCDHA13Q9Y5I0 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC26.06■■□□□ 1.76
PCDHA13Q9Y5I0 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC26.05■■□□□ 1.76
PCDHA13Q9Y5I0 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC26.05■■□□□ 1.76
PCDHA13Q9Y5I0 CHML-204ENST00000638121 920 ntTSL 2 BASIC26.05■■□□□ 1.76
PCDHA13Q9Y5I0 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC26.05■■□□□ 1.76
PCDHA13Q9Y5I0 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC26.05■■□□□ 1.76
PCDHA13Q9Y5I0 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
PCDHA13Q9Y5I0 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
PCDHA13Q9Y5I0 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
PCDHA13Q9Y5I0 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
PCDHA13Q9Y5I0 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
PCDHA13Q9Y5I0 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC26.04■■□□□ 1.76
PCDHA13Q9Y5I0 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC26.03■■□□□ 1.76
PCDHA13Q9Y5I0 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC26.03■■□□□ 1.76
PCDHA13Q9Y5I0 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC26.03■■□□□ 1.76
PCDHA13Q9Y5I0 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC26.03■■□□□ 1.76
PCDHA13Q9Y5I0 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC26.02■■□□□ 1.76
PCDHA13Q9Y5I0 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC26.02■■□□□ 1.76
PCDHA13Q9Y5I0 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC26.01■■□□□ 1.75
PCDHA13Q9Y5I0 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
PCDHA13Q9Y5I0 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC26.01■■□□□ 1.75
PCDHA13Q9Y5I0 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC26.01■■□□□ 1.75
PCDHA13Q9Y5I0 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
PCDHA13Q9Y5I0 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
PCDHA13Q9Y5I0 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC26■■□□□ 1.75
PCDHA13Q9Y5I0 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC26■■□□□ 1.75
PCDHA13Q9Y5I0 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
PCDHA13Q9Y5I0 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
PCDHA13Q9Y5I0 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC26■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms