Protein–RNA interactions for Protein: Q9Y3P8

SIT1, Signaling threshold-regulating transmembrane adapter 1, humanhuman

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIT1Q9Y3P8 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC25.15■■□□□ 1.62
SIT1Q9Y3P8 Z92544.1-202ENST00000571933 1220 ntBASIC25.15■■□□□ 1.62
SIT1Q9Y3P8 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
SIT1Q9Y3P8 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC25.14■■□□□ 1.62
SIT1Q9Y3P8 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
SIT1Q9Y3P8 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC25.14■■□□□ 1.61
SIT1Q9Y3P8 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SIT1Q9Y3P8 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC25.13■■□□□ 1.61
SIT1Q9Y3P8 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC25.13■■□□□ 1.61
SIT1Q9Y3P8 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC25.13■■□□□ 1.61
SIT1Q9Y3P8 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC25.13■■□□□ 1.61
SIT1Q9Y3P8 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SIT1Q9Y3P8 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC25.12■■□□□ 1.61
SIT1Q9Y3P8 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
SIT1Q9Y3P8 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC25.12■■□□□ 1.61
SIT1Q9Y3P8 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC25.12■■□□□ 1.61
SIT1Q9Y3P8 TK2-216ENST00000564917 1156 ntTSL 3 BASIC25.12■■□□□ 1.61
SIT1Q9Y3P8 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
SIT1Q9Y3P8 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SIT1Q9Y3P8 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC25.12■■□□□ 1.61
SIT1Q9Y3P8 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SIT1Q9Y3P8 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SIT1Q9Y3P8 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SIT1Q9Y3P8 GRAMD4P7-201ENST00000578182 1232 ntBASIC25.11■■□□□ 1.61
SIT1Q9Y3P8 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC25.11■■□□□ 1.61
SIT1Q9Y3P8 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
SIT1Q9Y3P8 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
SIT1Q9Y3P8 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SIT1Q9Y3P8 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
SIT1Q9Y3P8 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
SIT1Q9Y3P8 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
SIT1Q9Y3P8 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SIT1Q9Y3P8 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SIT1Q9Y3P8 CREM-229ENST00000474362 1030 ntTSL 2 BASIC25.09■■□□□ 1.61
SIT1Q9Y3P8 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC25.09■■□□□ 1.61
SIT1Q9Y3P8 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
SIT1Q9Y3P8 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC25.08■■□□□ 1.61
SIT1Q9Y3P8 PEMT-206ENST00000435340 960 ntTSL 5 BASIC25.08■■□□□ 1.61
SIT1Q9Y3P8 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC25.08■■□□□ 1.6
SIT1Q9Y3P8 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC25.07■■□□□ 1.6
SIT1Q9Y3P8 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
SIT1Q9Y3P8 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC25.06■■□□□ 1.6
SIT1Q9Y3P8 AL359504.2-201ENST00000605506 1601 ntBASIC25.06■■□□□ 1.6
SIT1Q9Y3P8 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
SIT1Q9Y3P8 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC25.06■■□□□ 1.6
SIT1Q9Y3P8 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
SIT1Q9Y3P8 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC25.05■■□□□ 1.6
SIT1Q9Y3P8 AC087393.1-201ENST00000582896 145 ntBASIC25.05■■□□□ 1.6
SIT1Q9Y3P8 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC25.05■■□□□ 1.6
SIT1Q9Y3P8 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
SIT1Q9Y3P8 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
SIT1Q9Y3P8 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
SIT1Q9Y3P8 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC25.04■■□□□ 1.6
SIT1Q9Y3P8 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC25.04■■□□□ 1.6
SIT1Q9Y3P8 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC25.04■■□□□ 1.6
SIT1Q9Y3P8 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC25.03■■□□□ 1.6
SIT1Q9Y3P8 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC25.03■■□□□ 1.6
SIT1Q9Y3P8 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SIT1Q9Y3P8 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
SIT1Q9Y3P8 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
SIT1Q9Y3P8 KRT125P-201ENST00000546827 989 ntBASIC25.02■■□□□ 1.6
SIT1Q9Y3P8 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
SIT1Q9Y3P8 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC25.02■■□□□ 1.6
SIT1Q9Y3P8 ST7-AS1-201ENST00000456775 1889 ntBASIC25.02■■□□□ 1.6
SIT1Q9Y3P8 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
SIT1Q9Y3P8 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC25.01■■□□□ 1.59
SIT1Q9Y3P8 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC25.01■■□□□ 1.59
SIT1Q9Y3P8 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC25.01■■□□□ 1.59
SIT1Q9Y3P8 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC25■■□□□ 1.59
SIT1Q9Y3P8 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
SIT1Q9Y3P8 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SIT1Q9Y3P8 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
SIT1Q9Y3P8 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC24.99■■□□□ 1.59
SIT1Q9Y3P8 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
SIT1Q9Y3P8 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
SIT1Q9Y3P8 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC24.98■■□□□ 1.59
SIT1Q9Y3P8 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC24.98■■□□□ 1.59
SIT1Q9Y3P8 MIR4787-201ENST00000607364 84 ntBASIC24.98■■□□□ 1.59
SIT1Q9Y3P8 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC24.97■■□□□ 1.59
SIT1Q9Y3P8 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC24.97■■□□□ 1.59
SIT1Q9Y3P8 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC24.97■■□□□ 1.59
SIT1Q9Y3P8 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC24.97■■□□□ 1.59
SIT1Q9Y3P8 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
SIT1Q9Y3P8 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
SIT1Q9Y3P8 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC24.97■■□□□ 1.59
SIT1Q9Y3P8 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC24.97■■□□□ 1.59
SIT1Q9Y3P8 LONRF2P2-201ENST00000439212 571 ntBASIC24.97■■□□□ 1.59
SIT1Q9Y3P8 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC24.97■■□□□ 1.59
SIT1Q9Y3P8 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC24.97■■□□□ 1.59
SIT1Q9Y3P8 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC24.97■■□□□ 1.59
SIT1Q9Y3P8 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC24.96■■□□□ 1.59
SIT1Q9Y3P8 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC24.96■■□□□ 1.59
SIT1Q9Y3P8 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
SIT1Q9Y3P8 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC24.95■■□□□ 1.58
SIT1Q9Y3P8 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC24.95■■□□□ 1.58
SIT1Q9Y3P8 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC24.95■■□□□ 1.58
SIT1Q9Y3P8 BX664725.1-201ENST00000438252 379 ntBASIC24.95■■□□□ 1.58
SIT1Q9Y3P8 RPS2P7-201ENST00000447334 885 ntBASIC24.95■■□□□ 1.58
SIT1Q9Y3P8 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
SIT1Q9Y3P8 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms