Protein–RNA interactions for Protein: Q9UJ98

STAG3, Cohesin subunit SA-3, humanhuman

Predictions only

Length 1,225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG3Q9UJ98 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC35.88■■■■□ 3.33
STAG3Q9UJ98 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC35.87■■■■□ 3.33
STAG3Q9UJ98 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC35.86■■■■□ 3.33
STAG3Q9UJ98 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC35.85■■■■□ 3.33
STAG3Q9UJ98 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC35.85■■■■□ 3.33
STAG3Q9UJ98 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC35.85■■■■□ 3.33
STAG3Q9UJ98 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC35.85■■■■□ 3.33
STAG3Q9UJ98 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC35.85■■■■□ 3.33
STAG3Q9UJ98 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC35.85■■■■□ 3.33
STAG3Q9UJ98 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC35.85■■■■□ 3.33
STAG3Q9UJ98 ABCB10P3-201ENST00000561950 2166 ntBASIC35.85■■■■□ 3.33
STAG3Q9UJ98 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC35.84■■■■□ 3.33
STAG3Q9UJ98 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC35.84■■■■□ 3.33
STAG3Q9UJ98 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC35.84■■■■□ 3.33
STAG3Q9UJ98 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC35.84■■■■□ 3.33
STAG3Q9UJ98 AL359504.2-201ENST00000605506 1601 ntBASIC35.84■■■■□ 3.33
STAG3Q9UJ98 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC35.84■■■■□ 3.33
STAG3Q9UJ98 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC35.83■■■■□ 3.33
STAG3Q9UJ98 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC35.83■■■■□ 3.33
STAG3Q9UJ98 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC35.82■■■■□ 3.32
STAG3Q9UJ98 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC35.81■■■■□ 3.32
STAG3Q9UJ98 AP002414.2-202ENST00000590929 1450 ntBASIC35.81■■■■□ 3.32
STAG3Q9UJ98 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC35.81■■■■□ 3.32
STAG3Q9UJ98 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC35.81■■■■□ 3.32
STAG3Q9UJ98 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC35.81■■■■□ 3.32
STAG3Q9UJ98 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC35.8■■■■□ 3.32
STAG3Q9UJ98 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC35.8■■■■□ 3.32
STAG3Q9UJ98 RNF146-205ENST00000477776 762 ntTSL 3 BASIC35.8■■■■□ 3.32
STAG3Q9UJ98 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC35.8■■■■□ 3.32
STAG3Q9UJ98 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC35.8■■■■□ 3.32
STAG3Q9UJ98 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC35.79■■■■□ 3.32
STAG3Q9UJ98 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC35.79■■■■□ 3.32
STAG3Q9UJ98 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC35.78■■■■□ 3.32
STAG3Q9UJ98 AC239859.2-201ENST00000444165 318 ntBASIC35.78■■■■□ 3.32
STAG3Q9UJ98 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC35.78■■■■□ 3.32
STAG3Q9UJ98 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC35.77■■■■□ 3.32
STAG3Q9UJ98 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC35.77■■■■□ 3.32
STAG3Q9UJ98 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC35.77■■■■□ 3.32
STAG3Q9UJ98 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC35.77■■■■□ 3.32
STAG3Q9UJ98 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC35.77■■■■□ 3.32
STAG3Q9UJ98 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC35.77■■■■□ 3.32
STAG3Q9UJ98 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC35.76■■■■□ 3.32
STAG3Q9UJ98 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC35.74■■■■□ 3.31
STAG3Q9UJ98 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC35.74■■■■□ 3.31
STAG3Q9UJ98 AL139393.2-201ENST00000608721 2025 ntBASIC35.73■■■■□ 3.31
STAG3Q9UJ98 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC35.73■■■■□ 3.31
STAG3Q9UJ98 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC35.73■■■■□ 3.31
STAG3Q9UJ98 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC35.73■■■■□ 3.31
STAG3Q9UJ98 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC35.72■■■■□ 3.31
STAG3Q9UJ98 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC35.72■■■■□ 3.31
STAG3Q9UJ98 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC35.72■■■■□ 3.31
STAG3Q9UJ98 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC35.72■■■■□ 3.31
STAG3Q9UJ98 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC35.71■■■■□ 3.31
STAG3Q9UJ98 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC35.71■■■■□ 3.31
STAG3Q9UJ98 AC019171.1-201ENST00000601251 1056 ntBASIC35.71■■■■□ 3.31
STAG3Q9UJ98 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC35.7■■■■□ 3.31
STAG3Q9UJ98 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC35.69■■■■□ 3.3
STAG3Q9UJ98 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC35.69■■■■□ 3.3
STAG3Q9UJ98 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC35.69■■■■□ 3.3
STAG3Q9UJ98 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC35.69■■■■□ 3.3
STAG3Q9UJ98 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC35.69■■■■□ 3.3
STAG3Q9UJ98 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC35.68■■■■□ 3.3
STAG3Q9UJ98 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC35.68■■■■□ 3.3
STAG3Q9UJ98 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC35.68■■■■□ 3.3
STAG3Q9UJ98 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC35.68■■■■□ 3.3
STAG3Q9UJ98 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC35.67■■■■□ 3.3
STAG3Q9UJ98 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC35.67■■■■□ 3.3
STAG3Q9UJ98 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC35.67■■■■□ 3.3
STAG3Q9UJ98 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC35.67■■■■□ 3.3
STAG3Q9UJ98 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC35.67■■■■□ 3.3
STAG3Q9UJ98 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC35.66■■■■□ 3.3
STAG3Q9UJ98 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC35.66■■■■□ 3.3
STAG3Q9UJ98 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC35.66■■■■□ 3.3
STAG3Q9UJ98 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC35.66■■■■□ 3.3
STAG3Q9UJ98 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC35.65■■■■□ 3.3
STAG3Q9UJ98 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC35.65■■■■□ 3.3
STAG3Q9UJ98 TK2-216ENST00000564917 1156 ntTSL 3 BASIC35.65■■■■□ 3.3
STAG3Q9UJ98 AC087393.1-201ENST00000582896 145 ntBASIC35.65■■■■□ 3.3
STAG3Q9UJ98 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC35.65■■■■□ 3.3
STAG3Q9UJ98 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC35.65■■■■□ 3.3
STAG3Q9UJ98 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC35.65■■■■□ 3.3
STAG3Q9UJ98 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC35.64■■■■□ 3.3
STAG3Q9UJ98 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC35.64■■■■□ 3.3
STAG3Q9UJ98 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC35.64■■■■□ 3.3
STAG3Q9UJ98 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC35.64■■■■□ 3.3
STAG3Q9UJ98 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC35.64■■■■□ 3.3
STAG3Q9UJ98 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC35.63■■■■□ 3.29
STAG3Q9UJ98 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC35.63■■■■□ 3.29
STAG3Q9UJ98 AC008406.3-201ENST00000620001 1374 ntBASIC35.63■■■■□ 3.29
STAG3Q9UJ98 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC35.62■■■■□ 3.29
STAG3Q9UJ98 Z92544.1-202ENST00000571933 1220 ntBASIC35.62■■■■□ 3.29
STAG3Q9UJ98 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC35.62■■■■□ 3.29
STAG3Q9UJ98 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC35.62■■■■□ 3.29
STAG3Q9UJ98 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC35.61■■■■□ 3.29
STAG3Q9UJ98 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC35.61■■■■□ 3.29
STAG3Q9UJ98 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC35.61■■■■□ 3.29
STAG3Q9UJ98 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC35.6■■■■□ 3.29
STAG3Q9UJ98 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC35.6■■■■□ 3.29
STAG3Q9UJ98 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC35.6■■■■□ 3.29
STAG3Q9UJ98 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC35.59■■■■□ 3.29
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms