Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC23.74■■□□□ 1.39
SPHK1Q9NYA1 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SPHK1Q9NYA1 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC23.73■■□□□ 1.39
SPHK1Q9NYA1 HYI-213ENST00000583037 1322 ntTSL 5 BASIC23.73■■□□□ 1.39
SPHK1Q9NYA1 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SPHK1Q9NYA1 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SPHK1Q9NYA1 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
SPHK1Q9NYA1 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
SPHK1Q9NYA1 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC23.72■■□□□ 1.39
SPHK1Q9NYA1 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC23.72■■□□□ 1.39
SPHK1Q9NYA1 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
SPHK1Q9NYA1 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
SPHK1Q9NYA1 AP004609.3-201ENST00000610705 1884 ntBASIC23.71■■□□□ 1.39
SPHK1Q9NYA1 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
SPHK1Q9NYA1 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SPHK1Q9NYA1 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SPHK1Q9NYA1 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC23.7■■□□□ 1.39
SPHK1Q9NYA1 PFN2-211ENST00000489155 636 ntTSL 4 BASIC23.7■■□□□ 1.38
SPHK1Q9NYA1 U85056.1-201ENST00000616429 682 ntBASIC23.7■■□□□ 1.38
SPHK1Q9NYA1 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
SPHK1Q9NYA1 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC23.69■■□□□ 1.38
SPHK1Q9NYA1 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
SPHK1Q9NYA1 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC23.69■■□□□ 1.38
SPHK1Q9NYA1 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
SPHK1Q9NYA1 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC23.69■■□□□ 1.38
SPHK1Q9NYA1 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
SPHK1Q9NYA1 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC23.69■■□□□ 1.38
SPHK1Q9NYA1 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SPHK1Q9NYA1 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
SPHK1Q9NYA1 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SPHK1Q9NYA1 AC142472.1-201ENST00000612013 1741 ntBASIC23.68■■□□□ 1.38
SPHK1Q9NYA1 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC23.68■■□□□ 1.38
SPHK1Q9NYA1 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
SPHK1Q9NYA1 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC23.68■■□□□ 1.38
SPHK1Q9NYA1 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SPHK1Q9NYA1 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SPHK1Q9NYA1 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
SPHK1Q9NYA1 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
SPHK1Q9NYA1 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
SPHK1Q9NYA1 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
SPHK1Q9NYA1 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
SPHK1Q9NYA1 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
SPHK1Q9NYA1 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
SPHK1Q9NYA1 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
SPHK1Q9NYA1 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
SPHK1Q9NYA1 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
SPHK1Q9NYA1 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
SPHK1Q9NYA1 RP9P-202ENST00000450133 1212 ntBASIC23.66■■□□□ 1.38
SPHK1Q9NYA1 MIR3960-201ENST00000583311 91 ntBASIC23.66■■□□□ 1.38
SPHK1Q9NYA1 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC23.66■■□□□ 1.38
SPHK1Q9NYA1 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SPHK1Q9NYA1 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
SPHK1Q9NYA1 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
SPHK1Q9NYA1 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SPHK1Q9NYA1 AC093536.1-201ENST00000569153 554 ntBASIC23.65■■□□□ 1.38
SPHK1Q9NYA1 NTF6A-201ENST00000591175 560 ntBASIC23.65■■□□□ 1.38
SPHK1Q9NYA1 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
SPHK1Q9NYA1 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC23.64■■□□□ 1.38
SPHK1Q9NYA1 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
SPHK1Q9NYA1 AC026202.3-201ENST00000600805 1127 ntBASIC23.64■■□□□ 1.37
SPHK1Q9NYA1 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC23.64■■□□□ 1.37
SPHK1Q9NYA1 AC009831.1-201ENST00000580420 1582 ntBASIC23.64■■□□□ 1.37
SPHK1Q9NYA1 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC23.64■■□□□ 1.37
SPHK1Q9NYA1 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC23.63■■□□□ 1.37
SPHK1Q9NYA1 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
SPHK1Q9NYA1 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC23.63■■□□□ 1.37
SPHK1Q9NYA1 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SPHK1Q9NYA1 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC23.63■■□□□ 1.37
SPHK1Q9NYA1 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SPHK1Q9NYA1 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SPHK1Q9NYA1 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
SPHK1Q9NYA1 GFER-205ENST00000569451 517 ntTSL 5 BASIC23.62■■□□□ 1.37
SPHK1Q9NYA1 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC23.62■■□□□ 1.37
SPHK1Q9NYA1 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SPHK1Q9NYA1 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SPHK1Q9NYA1 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SPHK1Q9NYA1 AL121749.1-202ENST00000609313 2153 ntBASIC23.61■■□□□ 1.37
SPHK1Q9NYA1 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
SPHK1Q9NYA1 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
SPHK1Q9NYA1 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
SPHK1Q9NYA1 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
SPHK1Q9NYA1 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC23.61■■□□□ 1.37
SPHK1Q9NYA1 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
SPHK1Q9NYA1 AC133552.2-201ENST00000619106 1032 ntBASIC23.61■■□□□ 1.37
SPHK1Q9NYA1 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
SPHK1Q9NYA1 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC23.61■■□□□ 1.37
SPHK1Q9NYA1 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
SPHK1Q9NYA1 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC23.6■■□□□ 1.37
SPHK1Q9NYA1 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
SPHK1Q9NYA1 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
SPHK1Q9NYA1 PKM-203ENST00000389093 2279 ntTSL 5 BASIC23.6■■□□□ 1.37
SPHK1Q9NYA1 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SPHK1Q9NYA1 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
SPHK1Q9NYA1 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC23.6■■□□□ 1.37
SPHK1Q9NYA1 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SPHK1Q9NYA1 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC23.59■■□□□ 1.37
SPHK1Q9NYA1 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SPHK1Q9NYA1 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SPHK1Q9NYA1 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
SPHK1Q9NYA1 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms