Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC29.41■■■□□ 2.3
DDX4Q9NQI0 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
DDX4Q9NQI0 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC29.41■■■□□ 2.3
DDX4Q9NQI0 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC29.41■■■□□ 2.3
DDX4Q9NQI0 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC29.41■■■□□ 2.3
DDX4Q9NQI0 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC29.4■■■□□ 2.3
DDX4Q9NQI0 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC29.4■■■□□ 2.3
DDX4Q9NQI0 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC29.39■■■□□ 2.3
DDX4Q9NQI0 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
DDX4Q9NQI0 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC29.39■■■□□ 2.3
DDX4Q9NQI0 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.29
DDX4Q9NQI0 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC29.38■■■□□ 2.29
DDX4Q9NQI0 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC29.37■■■□□ 2.29
DDX4Q9NQI0 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC29.37■■■□□ 2.29
DDX4Q9NQI0 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC29.37■■■□□ 2.29
DDX4Q9NQI0 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC29.36■■■□□ 2.29
DDX4Q9NQI0 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC29.36■■■□□ 2.29
DDX4Q9NQI0 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC29.36■■■□□ 2.29
DDX4Q9NQI0 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC29.36■■■□□ 2.29
DDX4Q9NQI0 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC29.36■■■□□ 2.29
DDX4Q9NQI0 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
DDX4Q9NQI0 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
DDX4Q9NQI0 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
DDX4Q9NQI0 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
DDX4Q9NQI0 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
DDX4Q9NQI0 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC29.34■■■□□ 2.29
DDX4Q9NQI0 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC29.34■■■□□ 2.29
DDX4Q9NQI0 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
DDX4Q9NQI0 AC010980.1-201ENST00000587192 1142 ntBASIC29.33■■■□□ 2.29
DDX4Q9NQI0 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
DDX4Q9NQI0 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC29.33■■■□□ 2.29
DDX4Q9NQI0 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC29.33■■■□□ 2.29
DDX4Q9NQI0 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
DDX4Q9NQI0 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC29.32■■■□□ 2.28
DDX4Q9NQI0 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
DDX4Q9NQI0 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
DDX4Q9NQI0 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC29.32■■■□□ 2.28
DDX4Q9NQI0 MIR6765-201ENST00000614092 87 ntBASIC29.32■■■□□ 2.28
DDX4Q9NQI0 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC29.31■■■□□ 2.28
DDX4Q9NQI0 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC29.3■■■□□ 2.28
DDX4Q9NQI0 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC29.3■■■□□ 2.28
DDX4Q9NQI0 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
DDX4Q9NQI0 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
DDX4Q9NQI0 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC29.29■■■□□ 2.28
DDX4Q9NQI0 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC29.29■■■□□ 2.28
DDX4Q9NQI0 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC29.29■■■□□ 2.28
DDX4Q9NQI0 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
DDX4Q9NQI0 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC29.28■■■□□ 2.28
DDX4Q9NQI0 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
DDX4Q9NQI0 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC29.28■■■□□ 2.28
DDX4Q9NQI0 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
DDX4Q9NQI0 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC29.28■■■□□ 2.28
DDX4Q9NQI0 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC29.28■■■□□ 2.28
DDX4Q9NQI0 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC29.28■■■□□ 2.28
DDX4Q9NQI0 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
DDX4Q9NQI0 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
DDX4Q9NQI0 BHLHE23-202ENST00000612929 1109 ntBASIC29.27■■■□□ 2.28
DDX4Q9NQI0 PVT1_1.1-201ENST00000615125 194 ntBASIC29.27■■■□□ 2.28
DDX4Q9NQI0 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
DDX4Q9NQI0 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC29.27■■■□□ 2.28
DDX4Q9NQI0 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC29.26■■■□□ 2.28
DDX4Q9NQI0 BEX3-202ENST00000372634 753 ntTSL 2 BASIC29.26■■■□□ 2.27
DDX4Q9NQI0 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
DDX4Q9NQI0 AL449106.1-201ENST00000608517 1980 ntBASIC29.26■■■□□ 2.27
DDX4Q9NQI0 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC29.26■■■□□ 2.27
DDX4Q9NQI0 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
DDX4Q9NQI0 AL451085.2-201ENST00000605085 799 ntBASIC29.25■■■□□ 2.27
DDX4Q9NQI0 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
DDX4Q9NQI0 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC29.25■■■□□ 2.27
DDX4Q9NQI0 LINC01003-201ENST00000564834 1764 ntBASIC29.24■■■□□ 2.27
DDX4Q9NQI0 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
DDX4Q9NQI0 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC29.24■■■□□ 2.27
DDX4Q9NQI0 AC018755.3-202ENST00000596210 929 ntBASIC29.24■■■□□ 2.27
DDX4Q9NQI0 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC29.24■■■□□ 2.27
DDX4Q9NQI0 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC29.24■■■□□ 2.27
DDX4Q9NQI0 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC29.24■■■□□ 2.27
DDX4Q9NQI0 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
DDX4Q9NQI0 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
DDX4Q9NQI0 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC29.23■■■□□ 2.27
DDX4Q9NQI0 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC29.23■■■□□ 2.27
DDX4Q9NQI0 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC29.23■■■□□ 2.27
DDX4Q9NQI0 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
DDX4Q9NQI0 KRT8P33-201ENST00000508125 1423 ntBASIC29.22■■■□□ 2.27
DDX4Q9NQI0 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC29.22■■■□□ 2.27
DDX4Q9NQI0 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC29.22■■■□□ 2.27
DDX4Q9NQI0 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC29.22■■■□□ 2.27
DDX4Q9NQI0 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC29.21■■■□□ 2.27
DDX4Q9NQI0 AC103834.1-201ENST00000520383 144 ntBASIC29.21■■■□□ 2.27
DDX4Q9NQI0 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC29.2■■■□□ 2.27
DDX4Q9NQI0 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
DDX4Q9NQI0 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC29.2■■■□□ 2.26
DDX4Q9NQI0 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC29.2■■■□□ 2.26
DDX4Q9NQI0 AC139795.1-202ENST00000500444 432 ntBASIC29.2■■■□□ 2.26
DDX4Q9NQI0 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC29.2■■■□□ 2.26
DDX4Q9NQI0 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC29.2■■■□□ 2.26
DDX4Q9NQI0 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
DDX4Q9NQI0 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
DDX4Q9NQI0 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC29.2■■■□□ 2.26
DDX4Q9NQI0 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
DDX4Q9NQI0 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Retrieved 100 of 98,524 protein–RNA pairs in 1401.4 ms