Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
CCDC168Q8NDH2 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC168Q8NDH2 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC168Q8NDH2 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC168Q8NDH2 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC20.98■□□□□ 0.95
CCDC168Q8NDH2 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
CCDC168Q8NDH2 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.98■□□□□ 0.95
CCDC168Q8NDH2 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
CCDC168Q8NDH2 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.98■□□□□ 0.95
CCDC168Q8NDH2 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.98■□□□□ 0.95
CCDC168Q8NDH2 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.98■□□□□ 0.95
CCDC168Q8NDH2 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC20.97■□□□□ 0.95
CCDC168Q8NDH2 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC168Q8NDH2 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.97■□□□□ 0.95
CCDC168Q8NDH2 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
CCDC168Q8NDH2 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
CCDC168Q8NDH2 UNC93B8-201ENST00000511903 705 ntBASIC20.97■□□□□ 0.95
CCDC168Q8NDH2 AC005837.3-201ENST00000612163 286 ntBASIC20.97■□□□□ 0.95
CCDC168Q8NDH2 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC168Q8NDH2 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
CCDC168Q8NDH2 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.96■□□□□ 0.95
CCDC168Q8NDH2 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.96■□□□□ 0.95
CCDC168Q8NDH2 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC168Q8NDH2 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC168Q8NDH2 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC168Q8NDH2 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC168Q8NDH2 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CCDC168Q8NDH2 AC019171.1-201ENST00000601251 1056 ntBASIC20.95■□□□□ 0.94
CCDC168Q8NDH2 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC168Q8NDH2 LONRF2P2-201ENST00000439212 571 ntBASIC20.95■□□□□ 0.94
CCDC168Q8NDH2 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC168Q8NDH2 MIR3960-201ENST00000583311 91 ntBASIC20.94■□□□□ 0.94
CCDC168Q8NDH2 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC168Q8NDH2 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
CCDC168Q8NDH2 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
CCDC168Q8NDH2 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC168Q8NDH2 AC026271.2-201ENST00000428091 497 ntBASIC20.94■□□□□ 0.94
CCDC168Q8NDH2 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.94■□□□□ 0.94
CCDC168Q8NDH2 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC168Q8NDH2 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC168Q8NDH2 BX664725.1-201ENST00000438252 379 ntBASIC20.93■□□□□ 0.94
CCDC168Q8NDH2 KRT16P3-201ENST00000439127 1283 ntBASIC20.93■□□□□ 0.94
CCDC168Q8NDH2 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CCDC168Q8NDH2 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC20.92■□□□□ 0.94
CCDC168Q8NDH2 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC168Q8NDH2 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC168Q8NDH2 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.92■□□□□ 0.94
CCDC168Q8NDH2 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC168Q8NDH2 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC168Q8NDH2 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.92■□□□□ 0.94
CCDC168Q8NDH2 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC168Q8NDH2 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC168Q8NDH2 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.91■□□□□ 0.94
CCDC168Q8NDH2 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.91■□□□□ 0.94
CCDC168Q8NDH2 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC20.91■□□□□ 0.94
CCDC168Q8NDH2 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC168Q8NDH2 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC168Q8NDH2 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC168Q8NDH2 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.9■□□□□ 0.94
CCDC168Q8NDH2 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
CCDC168Q8NDH2 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.88■□□□□ 0.93
CCDC168Q8NDH2 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC168Q8NDH2 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC168Q8NDH2 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CCDC168Q8NDH2 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC168Q8NDH2 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.87■□□□□ 0.93
CCDC168Q8NDH2 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC168Q8NDH2 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC168Q8NDH2 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC168Q8NDH2 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC168Q8NDH2 ZNRF2P3-201ENST00000424200 374 ntBASIC20.86■□□□□ 0.93
CCDC168Q8NDH2 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC168Q8NDH2 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.86■□□□□ 0.93
CCDC168Q8NDH2 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC168Q8NDH2 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.85■□□□□ 0.93
CCDC168Q8NDH2 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.85■□□□□ 0.93
CCDC168Q8NDH2 RARRES2P6-201ENST00000567333 442 ntBASIC20.85■□□□□ 0.93
CCDC168Q8NDH2 AC087393.1-201ENST00000582896 145 ntBASIC20.85■□□□□ 0.93
CCDC168Q8NDH2 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC168Q8NDH2 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC168Q8NDH2 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.85■□□□□ 0.93
CCDC168Q8NDH2 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC168Q8NDH2 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC168Q8NDH2 AL135925.1-201ENST00000605920 1701 ntBASIC20.84■□□□□ 0.93
CCDC168Q8NDH2 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC168Q8NDH2 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
CCDC168Q8NDH2 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.93
CCDC168Q8NDH2 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.83■□□□□ 0.93
CCDC168Q8NDH2 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CCDC168Q8NDH2 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
CCDC168Q8NDH2 AC104564.3-201ENST00000582367 638 ntBASIC20.82■□□□□ 0.92
CCDC168Q8NDH2 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.82■□□□□ 0.92
CCDC168Q8NDH2 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC168Q8NDH2 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC168Q8NDH2 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC168Q8NDH2 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC168Q8NDH2 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC168Q8NDH2 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.81■□□□□ 0.92
CCDC168Q8NDH2 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC168Q8NDH2 AC022616.5-201ENST00000518796 181 ntBASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms