Protein–RNA interactions for Protein: Q8IXZ2

ZC3H3, Zinc finger CCCH domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H3Q8IXZ2 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
ZC3H3Q8IXZ2 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC26.9■■□□□ 1.9
ZC3H3Q8IXZ2 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
ZC3H3Q8IXZ2 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
ZC3H3Q8IXZ2 AL359258.2-201ENST00000564063 1566 ntBASIC26.89■■□□□ 1.9
ZC3H3Q8IXZ2 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC26.89■■□□□ 1.89
ZC3H3Q8IXZ2 AC092803.2-201ENST00000564287 1899 ntBASIC26.89■■□□□ 1.89
ZC3H3Q8IXZ2 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC26.89■■□□□ 1.89
ZC3H3Q8IXZ2 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC26.89■■□□□ 1.89
ZC3H3Q8IXZ2 DUSP8P4-201ENST00000399538 1761 ntBASIC26.89■■□□□ 1.89
ZC3H3Q8IXZ2 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC26.88■■□□□ 1.89
ZC3H3Q8IXZ2 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
ZC3H3Q8IXZ2 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
ZC3H3Q8IXZ2 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
ZC3H3Q8IXZ2 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC26.88■■□□□ 1.89
ZC3H3Q8IXZ2 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC26.87■■□□□ 1.89
ZC3H3Q8IXZ2 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC26.87■■□□□ 1.89
ZC3H3Q8IXZ2 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC26.87■■□□□ 1.89
ZC3H3Q8IXZ2 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC26.87■■□□□ 1.89
ZC3H3Q8IXZ2 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
ZC3H3Q8IXZ2 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
ZC3H3Q8IXZ2 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC26.86■■□□□ 1.89
ZC3H3Q8IXZ2 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
ZC3H3Q8IXZ2 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
ZC3H3Q8IXZ2 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC26.85■■□□□ 1.89
ZC3H3Q8IXZ2 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC26.85■■□□□ 1.89
ZC3H3Q8IXZ2 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
ZC3H3Q8IXZ2 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
ZC3H3Q8IXZ2 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
ZC3H3Q8IXZ2 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
ZC3H3Q8IXZ2 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC26.83■■□□□ 1.88
ZC3H3Q8IXZ2 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
ZC3H3Q8IXZ2 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC26.82■■□□□ 1.88
ZC3H3Q8IXZ2 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC26.82■■□□□ 1.88
ZC3H3Q8IXZ2 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
ZC3H3Q8IXZ2 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC26.82■■□□□ 1.88
ZC3H3Q8IXZ2 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC26.82■■□□□ 1.88
ZC3H3Q8IXZ2 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC26.82■■□□□ 1.88
ZC3H3Q8IXZ2 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
ZC3H3Q8IXZ2 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
ZC3H3Q8IXZ2 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
ZC3H3Q8IXZ2 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
ZC3H3Q8IXZ2 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
ZC3H3Q8IXZ2 AL359504.2-201ENST00000605506 1601 ntBASIC26.8■■□□□ 1.88
ZC3H3Q8IXZ2 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC26.8■■□□□ 1.88
ZC3H3Q8IXZ2 MBP-237ENST00000579129 1052 ntTSL 5 BASIC26.8■■□□□ 1.88
ZC3H3Q8IXZ2 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
ZC3H3Q8IXZ2 MIR639-201ENST00000384974 98 ntBASIC26.79■■□□□ 1.88
ZC3H3Q8IXZ2 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC26.79■■□□□ 1.88
ZC3H3Q8IXZ2 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
ZC3H3Q8IXZ2 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
ZC3H3Q8IXZ2 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC26.78■■□□□ 1.88
ZC3H3Q8IXZ2 RPS2-202ENST00000526522 924 ntTSL 2 BASIC26.78■■□□□ 1.88
ZC3H3Q8IXZ2 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
ZC3H3Q8IXZ2 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC26.78■■□□□ 1.88
ZC3H3Q8IXZ2 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC26.78■■□□□ 1.88
ZC3H3Q8IXZ2 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC26.77■■□□□ 1.88
ZC3H3Q8IXZ2 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
ZC3H3Q8IXZ2 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC26.77■■□□□ 1.88
ZC3H3Q8IXZ2 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC26.77■■□□□ 1.88
ZC3H3Q8IXZ2 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
ZC3H3Q8IXZ2 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.88
ZC3H3Q8IXZ2 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
ZC3H3Q8IXZ2 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC26.76■■□□□ 1.87
ZC3H3Q8IXZ2 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC26.76■■□□□ 1.87
ZC3H3Q8IXZ2 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC26.75■■□□□ 1.87
ZC3H3Q8IXZ2 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
ZC3H3Q8IXZ2 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
ZC3H3Q8IXZ2 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
ZC3H3Q8IXZ2 AC126177.7-201ENST00000547904 679 ntBASIC26.74■■□□□ 1.87
ZC3H3Q8IXZ2 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC26.74■■□□□ 1.87
ZC3H3Q8IXZ2 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
ZC3H3Q8IXZ2 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC26.74■■□□□ 1.87
ZC3H3Q8IXZ2 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
ZC3H3Q8IXZ2 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC26.73■■□□□ 1.87
ZC3H3Q8IXZ2 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
ZC3H3Q8IXZ2 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC26.72■■□□□ 1.87
ZC3H3Q8IXZ2 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
ZC3H3Q8IXZ2 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
ZC3H3Q8IXZ2 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC26.72■■□□□ 1.87
ZC3H3Q8IXZ2 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC26.72■■□□□ 1.87
ZC3H3Q8IXZ2 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC26.72■■□□□ 1.87
ZC3H3Q8IXZ2 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC26.71■■□□□ 1.87
ZC3H3Q8IXZ2 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC26.71■■□□□ 1.87
ZC3H3Q8IXZ2 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
ZC3H3Q8IXZ2 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
ZC3H3Q8IXZ2 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC26.7■■□□□ 1.87
ZC3H3Q8IXZ2 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
ZC3H3Q8IXZ2 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
ZC3H3Q8IXZ2 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC26.7■■□□□ 1.86
ZC3H3Q8IXZ2 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
ZC3H3Q8IXZ2 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
ZC3H3Q8IXZ2 AL157400.5-201ENST00000507624 621 ntBASIC26.7■■□□□ 1.86
ZC3H3Q8IXZ2 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
ZC3H3Q8IXZ2 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
ZC3H3Q8IXZ2 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC26.7■■□□□ 1.86
ZC3H3Q8IXZ2 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC26.7■■□□□ 1.86
ZC3H3Q8IXZ2 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.7■■□□□ 1.86
ZC3H3Q8IXZ2 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC26.7■■□□□ 1.86
ZC3H3Q8IXZ2 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms