Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC25.35■■□□□ 1.65
FOXR1Q6PIV2 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
FOXR1Q6PIV2 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
FOXR1Q6PIV2 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC25.35■■□□□ 1.65
FOXR1Q6PIV2 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
FOXR1Q6PIV2 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
FOXR1Q6PIV2 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC25.34■■□□□ 1.65
FOXR1Q6PIV2 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
FOXR1Q6PIV2 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
FOXR1Q6PIV2 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC25.34■■□□□ 1.65
FOXR1Q6PIV2 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
FOXR1Q6PIV2 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
FOXR1Q6PIV2 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC25.33■■□□□ 1.65
FOXR1Q6PIV2 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC25.33■■□□□ 1.65
FOXR1Q6PIV2 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
FOXR1Q6PIV2 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
FOXR1Q6PIV2 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC25.33■■□□□ 1.64
FOXR1Q6PIV2 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
FOXR1Q6PIV2 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC25.32■■□□□ 1.64
FOXR1Q6PIV2 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
FOXR1Q6PIV2 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
FOXR1Q6PIV2 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
FOXR1Q6PIV2 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
FOXR1Q6PIV2 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
FOXR1Q6PIV2 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC25.32■■□□□ 1.64
FOXR1Q6PIV2 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC25.31■■□□□ 1.64
FOXR1Q6PIV2 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC25.31■■□□□ 1.64
FOXR1Q6PIV2 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
FOXR1Q6PIV2 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
FOXR1Q6PIV2 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
FOXR1Q6PIV2 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
FOXR1Q6PIV2 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
FOXR1Q6PIV2 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
FOXR1Q6PIV2 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC25.3■■□□□ 1.64
FOXR1Q6PIV2 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC25.3■■□□□ 1.64
FOXR1Q6PIV2 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
FOXR1Q6PIV2 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC25.3■■□□□ 1.64
FOXR1Q6PIV2 METRNL-202ENST00000570778 967 ntTSL 5 BASIC25.3■■□□□ 1.64
FOXR1Q6PIV2 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
FOXR1Q6PIV2 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
FOXR1Q6PIV2 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
FOXR1Q6PIV2 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
FOXR1Q6PIV2 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
FOXR1Q6PIV2 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
FOXR1Q6PIV2 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
FOXR1Q6PIV2 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
FOXR1Q6PIV2 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC25.29■■□□□ 1.64
FOXR1Q6PIV2 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
FOXR1Q6PIV2 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC25.29■■□□□ 1.64
FOXR1Q6PIV2 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC25.28■■□□□ 1.64
FOXR1Q6PIV2 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
FOXR1Q6PIV2 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC25.28■■□□□ 1.64
FOXR1Q6PIV2 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC25.28■■□□□ 1.64
FOXR1Q6PIV2 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
FOXR1Q6PIV2 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
FOXR1Q6PIV2 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
FOXR1Q6PIV2 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC25.27■■□□□ 1.64
FOXR1Q6PIV2 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC25.27■■□□□ 1.64
FOXR1Q6PIV2 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
FOXR1Q6PIV2 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC25.26■■□□□ 1.63
FOXR1Q6PIV2 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC25.26■■□□□ 1.63
FOXR1Q6PIV2 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC25.26■■□□□ 1.63
FOXR1Q6PIV2 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
FOXR1Q6PIV2 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC25.26■■□□□ 1.63
FOXR1Q6PIV2 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
FOXR1Q6PIV2 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC25.26■■□□□ 1.63
FOXR1Q6PIV2 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC25.25■■□□□ 1.63
FOXR1Q6PIV2 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC25.25■■□□□ 1.63
FOXR1Q6PIV2 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
FOXR1Q6PIV2 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
FOXR1Q6PIV2 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC25.25■■□□□ 1.63
FOXR1Q6PIV2 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC25.24■■□□□ 1.63
FOXR1Q6PIV2 DUX4L13-201ENST00000554103 1267 ntBASIC25.24■■□□□ 1.63
FOXR1Q6PIV2 DUX4L15-201ENST00000611059 1267 ntBASIC25.24■■□□□ 1.63
FOXR1Q6PIV2 DUX4L23-201ENST00000615195 1269 ntBASIC25.24■■□□□ 1.63
FOXR1Q6PIV2 DUX4L24-201ENST00000617576 1269 ntBASIC25.24■■□□□ 1.63
FOXR1Q6PIV2 DUX4L22-201ENST00000618238 1269 ntBASIC25.24■■□□□ 1.63
FOXR1Q6PIV2 DUX4L20-201ENST00000619712 1269 ntBASIC25.24■■□□□ 1.63
FOXR1Q6PIV2 DUX4L21-201ENST00000622058 1269 ntBASIC25.24■■□□□ 1.63
FOXR1Q6PIV2 DUX4L10-201ENST00000622460 1267 ntBASIC25.24■■□□□ 1.63
FOXR1Q6PIV2 DUX4L25-201ENST00000624915 1269 ntBASIC25.24■■□□□ 1.63
FOXR1Q6PIV2 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
FOXR1Q6PIV2 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC25.23■■□□□ 1.63
FOXR1Q6PIV2 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
FOXR1Q6PIV2 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
FOXR1Q6PIV2 TMEM202-AS1-202ENST00000565181 2325 ntBASIC25.23■■□□□ 1.63
FOXR1Q6PIV2 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC25.23■■□□□ 1.63
FOXR1Q6PIV2 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC25.23■■□□□ 1.63
FOXR1Q6PIV2 HES6-205ENST00000409356 528 ntTSL 2 BASIC25.23■■□□□ 1.63
FOXR1Q6PIV2 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
FOXR1Q6PIV2 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
FOXR1Q6PIV2 DUSP8P4-201ENST00000399538 1761 ntBASIC25.23■■□□□ 1.63
FOXR1Q6PIV2 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC25.23■■□□□ 1.63
FOXR1Q6PIV2 ERN1-208ENST00000606895 2068 ntBASIC25.22■■□□□ 1.63
FOXR1Q6PIV2 EI24-212ENST00000615917 1407 ntTSL 2 BASIC25.22■■□□□ 1.63
FOXR1Q6PIV2 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC25.22■■□□□ 1.63
FOXR1Q6PIV2 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC25.22■■□□□ 1.63
FOXR1Q6PIV2 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
FOXR1Q6PIV2 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC25.21■■□□□ 1.63
FOXR1Q6PIV2 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC25.21■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms