Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC13.98□□□□□ -0.17
UBR4Q5T4S7 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC13.98□□□□□ -0.17
UBR4Q5T4S7 WHAMMP2-203ENST00000563942 1603 ntBASIC13.98□□□□□ -0.17
UBR4Q5T4S7 AL117332.1-201ENST00000622628 974 ntBASIC13.97□□□□□ -0.17
UBR4Q5T4S7 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
UBR4Q5T4S7 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
UBR4Q5T4S7 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
UBR4Q5T4S7 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
UBR4Q5T4S7 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
UBR4Q5T4S7 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC13.96□□□□□ -0.18
UBR4Q5T4S7 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
UBR4Q5T4S7 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
UBR4Q5T4S7 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UBR4Q5T4S7 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
UBR4Q5T4S7 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC13.94□□□□□ -0.18
UBR4Q5T4S7 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC13.94□□□□□ -0.18
UBR4Q5T4S7 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC13.94□□□□□ -0.18
UBR4Q5T4S7 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
UBR4Q5T4S7 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC13.93□□□□□ -0.18
UBR4Q5T4S7 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
UBR4Q5T4S7 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
UBR4Q5T4S7 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
UBR4Q5T4S7 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC13.93□□□□□ -0.18
UBR4Q5T4S7 IKBKGP1-201ENST00000612193 1073 ntBASIC13.93□□□□□ -0.18
UBR4Q5T4S7 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
UBR4Q5T4S7 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
UBR4Q5T4S7 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
UBR4Q5T4S7 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
UBR4Q5T4S7 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
UBR4Q5T4S7 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC13.92□□□□□ -0.18
UBR4Q5T4S7 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
UBR4Q5T4S7 AC106739.1-201ENST00000617035 715 ntBASIC13.92□□□□□ -0.18
UBR4Q5T4S7 MTX2-204ENST00000443241 799 ntTSL 3 BASIC13.92□□□□□ -0.18
UBR4Q5T4S7 AC022517.1-201ENST00000592429 346 ntBASIC13.92□□□□□ -0.18
UBR4Q5T4S7 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
UBR4Q5T4S7 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
UBR4Q5T4S7 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
UBR4Q5T4S7 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
UBR4Q5T4S7 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
UBR4Q5T4S7 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
UBR4Q5T4S7 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
UBR4Q5T4S7 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC13.91□□□□□ -0.18
UBR4Q5T4S7 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
UBR4Q5T4S7 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC13.91□□□□□ -0.18
UBR4Q5T4S7 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC13.91□□□□□ -0.18
UBR4Q5T4S7 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
UBR4Q5T4S7 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
UBR4Q5T4S7 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
UBR4Q5T4S7 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC13.91□□□□□ -0.18
UBR4Q5T4S7 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
UBR4Q5T4S7 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC13.91□□□□□ -0.18
UBR4Q5T4S7 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
UBR4Q5T4S7 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
UBR4Q5T4S7 HLA-L-209ENST00000420110 1011 ntBASIC13.9□□□□□ -0.18
UBR4Q5T4S7 ARL16-209ENST00000573715 763 ntTSL 3 BASIC13.9□□□□□ -0.18
UBR4Q5T4S7 ARL16-211ENST00000576135 694 ntTSL 3 BASIC13.9□□□□□ -0.18
UBR4Q5T4S7 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC13.9□□□□□ -0.18
UBR4Q5T4S7 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC13.9□□□□□ -0.18
UBR4Q5T4S7 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
UBR4Q5T4S7 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
UBR4Q5T4S7 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
UBR4Q5T4S7 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
UBR4Q5T4S7 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
UBR4Q5T4S7 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
UBR4Q5T4S7 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
UBR4Q5T4S7 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
UBR4Q5T4S7 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC13.89□□□□□ -0.19
UBR4Q5T4S7 RASSF1-AS1-201ENST00000629828 790 ntBASIC13.89□□□□□ -0.19
UBR4Q5T4S7 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC13.89□□□□□ -0.19
UBR4Q5T4S7 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
UBR4Q5T4S7 IDNK-203ENST00000405990 629 ntTSL 2 BASIC13.89□□□□□ -0.19
UBR4Q5T4S7 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UBR4Q5T4S7 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UBR4Q5T4S7 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
UBR4Q5T4S7 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UBR4Q5T4S7 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC13.88□□□□□ -0.19
UBR4Q5T4S7 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC13.88□□□□□ -0.19
UBR4Q5T4S7 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
UBR4Q5T4S7 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
UBR4Q5T4S7 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
UBR4Q5T4S7 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
UBR4Q5T4S7 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC13.87□□□□□ -0.19
UBR4Q5T4S7 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
UBR4Q5T4S7 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC13.86□□□□□ -0.19
UBR4Q5T4S7 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC13.86□□□□□ -0.19
UBR4Q5T4S7 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC13.86□□□□□ -0.19
UBR4Q5T4S7 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC13.86□□□□□ -0.19
UBR4Q5T4S7 AC093536.1-201ENST00000569153 554 ntBASIC13.86□□□□□ -0.19
UBR4Q5T4S7 TSPY9P-201ENST00000440215 945 ntBASIC13.86□□□□□ -0.19
UBR4Q5T4S7 TSPY11P-201ENST00000442607 1045 ntBASIC13.86□□□□□ -0.19
UBR4Q5T4S7 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC13.86□□□□□ -0.19
UBR4Q5T4S7 PBX2P1-201ENST00000493219 1291 ntBASIC13.86□□□□□ -0.19
UBR4Q5T4S7 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC13.86□□□□□ -0.19
UBR4Q5T4S7 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
UBR4Q5T4S7 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
UBR4Q5T4S7 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC13.85□□□□□ -0.19
UBR4Q5T4S7 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
UBR4Q5T4S7 MIR3621-201ENST00000580529 85 ntBASIC13.85□□□□□ -0.19
UBR4Q5T4S7 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
UBR4Q5T4S7 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms