Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NKX6-1P78426 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NKX6-1P78426 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
NKX6-1P78426 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
NKX6-1P78426 AL359258.2-201ENST00000564063 1566 ntBASIC21.44■■□□□ 1.02
NKX6-1P78426 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
NKX6-1P78426 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC21.44■■□□□ 1.02
NKX6-1P78426 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
NKX6-1P78426 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
NKX6-1P78426 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NKX6-1P78426 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
NKX6-1P78426 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
NKX6-1P78426 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
NKX6-1P78426 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
NKX6-1P78426 LINC01003-201ENST00000564834 1764 ntBASIC21.43■■□□□ 1.02
NKX6-1P78426 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
NKX6-1P78426 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
NKX6-1P78426 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
NKX6-1P78426 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
NKX6-1P78426 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
NKX6-1P78426 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.42■■□□□ 1.02
NKX6-1P78426 AL157400.5-201ENST00000507624 621 ntBASIC21.42■■□□□ 1.02
NKX6-1P78426 DUX4L18-201ENST00000553347 1267 ntBASIC21.42■■□□□ 1.02
NKX6-1P78426 AC129492.7-201ENST00000622992 756 ntBASIC21.42■■□□□ 1.02
NKX6-1P78426 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC21.41■■□□□ 1.02
NKX6-1P78426 MOB2-207ENST00000614710 705 ntTSL 5 BASIC21.41■■□□□ 1.02
NKX6-1P78426 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
NKX6-1P78426 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
NKX6-1P78426 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC21.41■■□□□ 1.02
NKX6-1P78426 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
NKX6-1P78426 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
NKX6-1P78426 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
NKX6-1P78426 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC21.4■■□□□ 1.02
NKX6-1P78426 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
NKX6-1P78426 AC142086.6-201ENST00000621154 1765 ntBASIC21.4■■□□□ 1.02
NKX6-1P78426 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.02
NKX6-1P78426 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
NKX6-1P78426 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
NKX6-1P78426 AL035685.1-201ENST00000636663 812 ntBASIC21.39■■□□□ 1.01
NKX6-1P78426 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
NKX6-1P78426 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
NKX6-1P78426 REST-210ENST00000638187 1334 ntTSL 5 BASIC21.38■■□□□ 1.01
NKX6-1P78426 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
NKX6-1P78426 AC007029.1-201ENST00000604183 313 ntBASIC21.38■■□□□ 1.01
NKX6-1P78426 AC133552.2-201ENST00000619106 1032 ntBASIC21.38■■□□□ 1.01
NKX6-1P78426 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC21.38■■□□□ 1.01
NKX6-1P78426 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
NKX6-1P78426 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.38■■□□□ 1.01
NKX6-1P78426 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
NKX6-1P78426 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.37■■□□□ 1.01
NKX6-1P78426 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NKX6-1P78426 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NKX6-1P78426 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NKX6-1P78426 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC21.37■■□□□ 1.01
NKX6-1P78426 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NKX6-1P78426 AL592293.1-201ENST00000502889 1188 ntBASIC21.37■■□□□ 1.01
NKX6-1P78426 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
NKX6-1P78426 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NKX6-1P78426 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NKX6-1P78426 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
NKX6-1P78426 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
NKX6-1P78426 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC21.36■■□□□ 1.01
NKX6-1P78426 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC21.36■■□□□ 1.01
NKX6-1P78426 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
NKX6-1P78426 WHAMMP3-201ENST00000611636 1609 ntBASIC21.36■■□□□ 1.01
NKX6-1P78426 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC21.36■■□□□ 1.01
NKX6-1P78426 BX255925.1-201ENST00000566954 1854 ntBASIC21.35■■□□□ 1.01
NKX6-1P78426 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
NKX6-1P78426 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
NKX6-1P78426 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
NKX6-1P78426 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
NKX6-1P78426 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
NKX6-1P78426 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC21.35■■□□□ 1.01
NKX6-1P78426 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC21.35■■□□□ 1.01
NKX6-1P78426 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC21.34■■□□□ 1.01
NKX6-1P78426 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC21.34■■□□□ 1.01
NKX6-1P78426 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21.34■■□□□ 1.01
NKX6-1P78426 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC21.34■■□□□ 1.01
NKX6-1P78426 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
NKX6-1P78426 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
NKX6-1P78426 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
NKX6-1P78426 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
NKX6-1P78426 AC009831.1-201ENST00000580420 1582 ntBASIC21.33■■□□□ 1.01
NKX6-1P78426 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
NKX6-1P78426 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC21.33■■□□□ 1.01
NKX6-1P78426 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.33■■□□□ 1.01
NKX6-1P78426 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
NKX6-1P78426 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
NKX6-1P78426 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
NKX6-1P78426 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC21.32■■□□□ 1
NKX6-1P78426 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
NKX6-1P78426 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
NKX6-1P78426 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC21.32■■□□□ 1
NKX6-1P78426 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC21.32■■□□□ 1
NKX6-1P78426 AL451085.2-201ENST00000605085 799 ntBASIC21.32■■□□□ 1
NKX6-1P78426 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
NKX6-1P78426 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NKX6-1P78426 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC21.31■■□□□ 1
NKX6-1P78426 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
NKX6-1P78426 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms