Protein–RNA interactions for Protein: P51911

CNN1, Calponin-1, humanhuman

Known RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1P51911 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CNN1P51911 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CNN1P51911 MIR6090-201ENST00000622481 60 ntBASIC19.1■□□□□ 0.65
CNN1P51911 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CNN1P51911 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC19.1■□□□□ 0.65
CNN1P51911 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CNN1P51911 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CNN1P51911 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CNN1P51911 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CNN1P51911 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CNN1P51911 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC19.08■□□□□ 0.64
CNN1P51911 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CNN1P51911 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CNN1P51911 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CNN1P51911 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
CNN1P51911 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CNN1P51911 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CNN1P51911 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CNN1P51911 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CNN1P51911 EI24-212ENST00000615917 1407 ntTSL 2 BASIC19.07■□□□□ 0.64
CNN1P51911 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CNN1P51911 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CNN1P51911 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC19.07■□□□□ 0.64
CNN1P51911 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CNN1P51911 AC133561.1-201ENST00000568600 2415 ntBASIC19.06■□□□□ 0.64
CNN1P51911 DUSP8P4-201ENST00000399538 1761 ntBASIC19.06■□□□□ 0.64
CNN1P51911 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CNN1P51911 AL162393.1-201ENST00000437852 946 ntBASIC19.06■□□□□ 0.64
CNN1P51911 NRG1-221ENST00000614767 762 ntTSL 5 BASIC19.06■□□□□ 0.64
CNN1P51911 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CNN1P51911 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CNN1P51911 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.06■□□□□ 0.64
CNN1P51911 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.05■□□□□ 0.64
CNN1P51911 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC19.05■□□□□ 0.64
CNN1P51911 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CNN1P51911 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.05■□□□□ 0.64
CNN1P51911 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNN1P51911 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
CNN1P51911 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
CNN1P51911 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CNN1P51911 AC087741.3-201ENST00000624270 1347 ntBASIC19.04■□□□□ 0.64
CNN1P51911 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CNN1P51911 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CNN1P51911 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CNN1P51911 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CNN1P51911 AC092803.2-201ENST00000564287 1899 ntBASIC19.04■□□□□ 0.64
CNN1P51911 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CNN1P51911 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CNN1P51911 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CNN1P51911 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CNN1P51911 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.03■□□□□ 0.64
CNN1P51911 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC19.03■□□□□ 0.64
CNN1P51911 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CNN1P51911 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CNN1P51911 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CNN1P51911 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC19.02■□□□□ 0.64
CNN1P51911 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC19.02■□□□□ 0.64
CNN1P51911 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC19.02■□□□□ 0.64
CNN1P51911 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CNN1P51911 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC19.02■□□□□ 0.64
CNN1P51911 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CNN1P51911 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.01■□□□□ 0.63
CNN1P51911 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
CNN1P51911 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC19.01■□□□□ 0.63
CNN1P51911 CIB2-204ENST00000557846 934 ntTSL 3 BASIC19.01■□□□□ 0.63
CNN1P51911 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC19.01■□□□□ 0.63
CNN1P51911 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CNN1P51911 MEST-211ENST00000437945 1455 ntTSL 5 BASIC19.01■□□□□ 0.63
CNN1P51911 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CNN1P51911 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
CNN1P51911 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CNN1P51911 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CNN1P51911 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CNN1P51911 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19■□□□□ 0.63
CNN1P51911 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
CNN1P51911 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19■□□□□ 0.63
CNN1P51911 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CNN1P51911 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
CNN1P51911 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CNN1P51911 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC19■□□□□ 0.63
CNN1P51911 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC19■□□□□ 0.63
CNN1P51911 AC044849.2-201ENST00000606596 710 ntBASIC19■□□□□ 0.63
CNN1P51911 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CNN1P51911 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CNN1P51911 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19■□□□□ 0.63
CNN1P51911 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CNN1P51911 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19■□□□□ 0.63
CNN1P51911 AC012676.1-201ENST00000574705 1949 ntBASIC19■□□□□ 0.63
CNN1P51911 AC135983.2-203ENST00000454486 1613 ntBASIC19■□□□□ 0.63
CNN1P51911 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC19■□□□□ 0.63
CNN1P51911 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC18.98■□□□□ 0.63
CNN1P51911 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC18.98■□□□□ 0.63
CNN1P51911 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNN1P51911 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNN1P51911 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CNN1P51911 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNN1P51911 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CNN1P51911 LINC00273-201ENST00000539813 1452 ntBASIC18.97■□□□□ 0.63
CNN1P51911 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC18.97■□□□□ 0.63
CNN1P51911 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms