Protein–RNA interactions for Protein: P40965

MSH4, MutS protein homolog 4, yeastyeast

Predicted RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH4P40965 ECM30YLR436C 3825 nt8.07□□□□□ -1.12
MSH4P40965 PRP2YNR011C 2631 nt8.06□□□□□ -1.12
MSH4P40965 DAL7YIR031C 1665 nt8.06□□□□□ -1.12
MSH4P40965 IMG1YCR046C 510 nt8.06□□□□□ -1.12
MSH4P40965 LIP5YOR196C 1245 nt8.06□□□□□ -1.12
MSH4P40965 YNL234WYNL234W 1281 nt8.05□□□□□ -1.12
MSH4P40965 SCS22YBL091C-A 528 nt8.05□□□□□ -1.12
MSH4P40965 OST3YOR085W 1053 nt8.05□□□□□ -1.12
MSH4P40965 BRN1YBL097W 2265 nt8.05□□□□□ -1.12
MSH4P40965 SIR2YDL042C 1689 nt8.05□□□□□ -1.12
MSH4P40965 CAN1YEL063C 1773 nt8.05□□□□□ -1.12
MSH4P40965 PCL10YGL134W 1302 nt8.04□□□□□ -1.12
MSH4P40965 RRP46YGR095C 672 nt8.04□□□□□ -1.12
MSH4P40965 MRPL36YBR122C 534 nt8.04□□□□□ -1.12
MSH4P40965 APE4YHR113W 1473 nt8.04□□□□□ -1.12
MSH4P40965 PGI1YBR196C 1665 nt8.04□□□□□ -1.12
MSH4P40965 ADE17YMR120C 1779 nt8.04□□□□□ -1.12
MSH4P40965 CDC7YDL017W 1524 nt8.03□□□□□ -1.12
MSH4P40965 FMP40YPL222W 2067 nt8.03□□□□□ -1.12
MSH4P40965 YCR049CYCR049C 447 nt8.03□□□□□ -1.12
MSH4P40965 YKL153WYKL153W 510 nt8.03□□□□□ -1.12
MSH4P40965 ASR1YPR093C 867 nt8.03□□□□□ -1.12
MSH4P40965 EMP65YER140W 1671 nt8.02□□□□□ -1.13
MSH4P40965 YIL029W-AYIL029W-A 372 nt8.02□□□□□ -1.13
MSH4P40965 MRS3YJL133W 945 nt8.02□□□□□ -1.13
MSH4P40965 ERG27YLR100W 1044 nt8.02□□□□□ -1.13
MSH4P40965 NUP84YDL116W 2181 nt8.02□□□□□ -1.13
MSH4P40965 SGE1YPR198W 1632 nt8.02□□□□□ -1.13
MSH4P40965 FCY2YER056C 1602 nt8.01□□□□□ -1.13
MSH4P40965 LCL3YGL085W 825 nt8.01□□□□□ -1.13
MSH4P40965 TIF2YJL138C 1188 nt8.01□□□□□ -1.13
MSH4P40965 MDH1YKL085W 1005 nt8.01□□□□□ -1.13
MSH4P40965 TIF1YKR059W 1188 nt8.01□□□□□ -1.13
MSH4P40965 YOL099CYOL099C 492 nt8.01□□□□□ -1.13
MSH4P40965 ILV6YCL009C 930 nt8.01□□□□□ -1.13
MSH4P40965 EXG2YDR261C 1689 nt8□□□□□ -1.13
MSH4P40965 LOT6YLR011W 576 nt8□□□□□ -1.13
MSH4P40965 RPL43AYPR043W 279 nt8□□□□□ -1.13
MSH4P40965 YDR401WYDR401W 564 nt7.99□□□□□ -1.13
MSH4P40965 RPL2BYIL018W 765 nt7.99□□□□□ -1.13
MSH4P40965 OCA1YNL099C 717 nt7.99□□□□□ -1.13
MSH4P40965 MRPL19YNL185C 477 nt7.99□□□□□ -1.13
MSH4P40965 SKY1YMR216C 2229 nt7.98□□□□□ -1.13
MSH4P40965 TAF4YMR005W 1167 nt7.98□□□□□ -1.13
MSH4P40965 RQC1YDR333C 2172 nt7.98□□□□□ -1.13
MSH4P40965 POX1YGL205W 2247 nt7.97□□□□□ -1.13
MSH4P40965 NUP57YGR119C 1626 nt7.96□□□□□ -1.13
MSH4P40965 NMD5YJR132W 3147 nt7.96□□□□□ -1.14
MSH4P40965 MMS21YEL019C 804 nt7.96□□□□□ -1.14
MSH4P40965 MRPS18YNL306W 654 nt7.96□□□□□ -1.14
MSH4P40965 NTG2YOL043C 1143 nt7.96□□□□□ -1.14
MSH4P40965 GAT1YFL021W 1533 nt7.95□□□□□ -1.14
MSH4P40965 TAF9YMR236W 474 nt7.95□□□□□ -1.14
MSH4P40965 SAL1YNL083W 1485 nt7.94□□□□□ -1.14
MSH4P40965 CRH1YGR189C 1524 nt7.94□□□□□ -1.14
MSH4P40965 IMD1YAR073W 1212 nt7.94□□□□□ -1.14
MSH4P40965 YOR012WYOR012W 414 nt7.94□□□□□ -1.14
MSH4P40965 CLN1YMR199W 1641 nt7.93□□□□□ -1.14
MSH4P40965 RRP1YDR087C 837 nt7.93□□□□□ -1.14
MSH4P40965 YLR036CYLR036C 612 nt7.93□□□□□ -1.14
MSH4P40965 NDJ1YOL104C 1059 nt7.93□□□□□ -1.14
MSH4P40965 YPR150WYPR150W 522 nt7.93□□□□□ -1.14
MSH4P40965 RSP5YER125W 2430 nt7.92□□□□□ -1.14
MSH4P40965 SUA5YGL169W 1281 nt7.92□□□□□ -1.14
MSH4P40965 ASF1YJL115W 840 nt7.92□□□□□ -1.14
MSH4P40965 HMS2YJR147W 1077 nt7.92□□□□□ -1.14
MSH4P40965 YLL056CYLL056C 897 nt7.92□□□□□ -1.14
MSH4P40965 SLD7YOR060C 774 nt7.92□□□□□ -1.14
MSH4P40965 COA2YPL189C-A 207 nt7.92□□□□□ -1.14
MSH4P40965 SNF4YGL115W 969 nt7.91□□□□□ -1.14
MSH4P40965 YAL016C-BYAL016C-B 186 nt7.91□□□□□ -1.14
MSH4P40965 TPK1YJL164C 1194 nt7.91□□□□□ -1.14
MSH4P40965 CWC25YNL245C 540 nt7.91□□□□□ -1.14
MSH4P40965 LSC1YOR142W 990 nt7.91□□□□□ -1.14
MSH4P40965 CIR2YOR356W 1896 nt7.91□□□□□ -1.14
MSH4P40965 MHP1YJL042W 4197 nt7.9□□□□□ -1.14
MSH4P40965 NUP49YGL172W 1419 nt7.9□□□□□ -1.14
MSH4P40965 ATG23YLR431C 1362 nt7.9□□□□□ -1.14
MSH4P40965 YAL045CYAL045C 309 nt7.9□□□□□ -1.14
MSH4P40965 AVO2YMR068W 1281 nt7.9□□□□□ -1.14
MSH4P40965 PHO85YPL031C 918 nt7.9□□□□□ -1.14
MSH4P40965 ATP4YPL078C 735 nt7.9□□□□□ -1.14
MSH4P40965 YEN1YER041W 2280 nt7.9□□□□□ -1.15
MSH4P40965 YGL102CYGL102C 429 nt7.89□□□□□ -1.15
MSH4P40965 THR1YHR025W 1074 nt7.89□□□□□ -1.15
MSH4P40965 RRN10YBL025W 438 nt7.89□□□□□ -1.15
MSH4P40965 CTR1YPR124W 1221 nt7.89□□□□□ -1.15
MSH4P40965 SEC23YPR181C 2307 nt7.89□□□□□ -1.15
MSH4P40965 ENP1YBR247C 1452 nt7.88□□□□□ -1.15
MSH4P40965 FYV1YDR024W 486 nt7.88□□□□□ -1.15
MSH4P40965 HHY1YEL059W 309 nt7.88□□□□□ -1.15
MSH4P40965 YER147C-AYER147C-A 411 nt7.88□□□□□ -1.15
MSH4P40965 DRE2YKR071C 1047 nt7.88□□□□□ -1.15
MSH4P40965 KIN1YDR122W 3195 nt7.88□□□□□ -1.15
MSH4P40965 VMA2YBR127C 1554 nt7.88□□□□□ -1.15
MSH4P40965 CTA1YDR256C 1548 nt7.88□□□□□ -1.15
MSH4P40965 VBA5YKR105C 1749 nt7.87□□□□□ -1.15
MSH4P40965 HPT1YDR399W 666 nt7.87□□□□□ -1.15
MSH4P40965 YHR218W-AYHR218W-A 318 nt7.87□□□□□ -1.15
MSH4P40965 YBL112CYBL112C 318 nt7.87□□□□□ -1.15
Retrieved 100 of 7,029 protein–RNA pairs in 31.4 ms