Protein–RNA interactions for Protein: P25054

APC, Adenomatous polyposis coli protein, humanhuman

Predictions only

Length 2,843 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APCP25054 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC21.27■■□□□ 1
APCP25054 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
APCP25054 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
APCP25054 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
APCP25054 UNC93B8-201ENST00000511903 705 ntBASIC21.26■□□□□ 0.99
APCP25054 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC21.25■□□□□ 0.99
APCP25054 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.25■□□□□ 0.99
APCP25054 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
APCP25054 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.24■□□□□ 0.99
APCP25054 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.24■□□□□ 0.99
APCP25054 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
APCP25054 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
APCP25054 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
APCP25054 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.24■□□□□ 0.99
APCP25054 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
APCP25054 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
APCP25054 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
APCP25054 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
APCP25054 AC110285.6-201ENST00000617652 491 ntBASIC21.23■□□□□ 0.99
APCP25054 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.22■□□□□ 0.99
APCP25054 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
APCP25054 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
APCP25054 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.22■□□□□ 0.99
APCP25054 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
APCP25054 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
APCP25054 LONRF2P2-201ENST00000439212 571 ntBASIC21.21■□□□□ 0.99
APCP25054 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC21.21■□□□□ 0.99
APCP25054 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
APCP25054 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
APCP25054 NALT1-201ENST00000429224 738 ntTSL 5 BASIC21.2■□□□□ 0.98
APCP25054 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
APCP25054 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
APCP25054 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.2■□□□□ 0.98
APCP25054 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
APCP25054 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
APCP25054 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
APCP25054 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.19■□□□□ 0.98
APCP25054 AC026271.2-201ENST00000428091 497 ntBASIC21.19■□□□□ 0.98
APCP25054 AC005837.3-201ENST00000612163 286 ntBASIC21.19■□□□□ 0.98
APCP25054 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
APCP25054 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
APCP25054 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
APCP25054 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
APCP25054 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
APCP25054 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
APCP25054 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
APCP25054 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.18■□□□□ 0.98
APCP25054 KRT16P3-201ENST00000439127 1283 ntBASIC21.18■□□□□ 0.98
APCP25054 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
APCP25054 AL135925.1-201ENST00000605920 1701 ntBASIC21.17■□□□□ 0.98
APCP25054 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.17■□□□□ 0.98
APCP25054 RARRES2P6-201ENST00000567333 442 ntBASIC21.17■□□□□ 0.98
APCP25054 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.17■□□□□ 0.98
APCP25054 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
APCP25054 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
APCP25054 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
APCP25054 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
APCP25054 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC21.16■□□□□ 0.98
APCP25054 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
APCP25054 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
APCP25054 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
APCP25054 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
APCP25054 BX664725.1-201ENST00000438252 379 ntBASIC21.15■□□□□ 0.98
APCP25054 AC022616.5-201ENST00000518796 181 ntBASIC21.15■□□□□ 0.98
APCP25054 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
APCP25054 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
APCP25054 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
APCP25054 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
APCP25054 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC21.14■□□□□ 0.97
APCP25054 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
APCP25054 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
APCP25054 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
APCP25054 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.13■□□□□ 0.97
APCP25054 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
APCP25054 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
APCP25054 AC087393.1-201ENST00000582896 145 ntBASIC21.13■□□□□ 0.97
APCP25054 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
APCP25054 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
APCP25054 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.12■□□□□ 0.97
APCP25054 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
APCP25054 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
APCP25054 AC100797.4-201ENST00000631653 1827 ntBASIC21.12■□□□□ 0.97
APCP25054 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
APCP25054 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
APCP25054 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC21.11■□□□□ 0.97
APCP25054 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.11■□□□□ 0.97
APCP25054 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC21.11■□□□□ 0.97
APCP25054 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.11■□□□□ 0.97
APCP25054 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.1■□□□□ 0.97
APCP25054 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
APCP25054 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
APCP25054 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
APCP25054 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
APCP25054 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
APCP25054 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC21.09■□□□□ 0.97
APCP25054 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC21.09■□□□□ 0.97
APCP25054 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
APCP25054 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
APCP25054 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
APCP25054 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms