Protein–RNA interactions for Protein: O75888

TNFSF13, Tumor necrosis factor ligand superfamily member 13, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13O75888 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
TNFSF13O75888 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TNFSF13O75888 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TNFSF13O75888 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TNFSF13O75888 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TNFSF13O75888 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC21.77■■□□□ 1.08
TNFSF13O75888 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TNFSF13O75888 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
TNFSF13O75888 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TNFSF13O75888 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
TNFSF13O75888 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC21.76■■□□□ 1.07
TNFSF13O75888 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
TNFSF13O75888 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TNFSF13O75888 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TNFSF13O75888 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TNFSF13O75888 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC21.75■■□□□ 1.07
TNFSF13O75888 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
TNFSF13O75888 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TNFSF13O75888 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TNFSF13O75888 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TNFSF13O75888 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC21.74■■□□□ 1.07
TNFSF13O75888 DUX4L18-201ENST00000553347 1267 ntBASIC21.74■■□□□ 1.07
TNFSF13O75888 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC21.74■■□□□ 1.07
TNFSF13O75888 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC21.74■■□□□ 1.07
TNFSF13O75888 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC21.74■■□□□ 1.07
TNFSF13O75888 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
TNFSF13O75888 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TNFSF13O75888 DUX4L9-201ENST00000449051 1259 ntBASIC21.73■■□□□ 1.07
TNFSF13O75888 AL449106.1-201ENST00000608517 1980 ntBASIC21.73■■□□□ 1.07
TNFSF13O75888 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
TNFSF13O75888 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
TNFSF13O75888 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TNFSF13O75888 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TNFSF13O75888 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC21.72■■□□□ 1.07
TNFSF13O75888 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TNFSF13O75888 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC21.72■■□□□ 1.07
TNFSF13O75888 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
TNFSF13O75888 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC21.71■■□□□ 1.07
TNFSF13O75888 SPCS2P3-201ENST00000500401 656 ntBASIC21.71■■□□□ 1.07
TNFSF13O75888 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
TNFSF13O75888 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
TNFSF13O75888 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC21.71■■□□□ 1.07
TNFSF13O75888 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC21.71■■□□□ 1.07
TNFSF13O75888 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
TNFSF13O75888 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
TNFSF13O75888 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
TNFSF13O75888 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TNFSF13O75888 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC21.7■■□□□ 1.06
TNFSF13O75888 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
TNFSF13O75888 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
TNFSF13O75888 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
TNFSF13O75888 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TNFSF13O75888 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.7■■□□□ 1.06
TNFSF13O75888 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TNFSF13O75888 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
TNFSF13O75888 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
TNFSF13O75888 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC21.68■■□□□ 1.06
TNFSF13O75888 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
TNFSF13O75888 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
TNFSF13O75888 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TNFSF13O75888 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TNFSF13O75888 BX255925.1-201ENST00000566954 1854 ntBASIC21.67■■□□□ 1.06
TNFSF13O75888 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TNFSF13O75888 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
TNFSF13O75888 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21.67■■□□□ 1.06
TNFSF13O75888 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC21.67■■□□□ 1.06
TNFSF13O75888 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC21.67■■□□□ 1.06
TNFSF13O75888 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
TNFSF13O75888 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TNFSF13O75888 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
TNFSF13O75888 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TNFSF13O75888 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TNFSF13O75888 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
TNFSF13O75888 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
TNFSF13O75888 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
TNFSF13O75888 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TNFSF13O75888 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.65■■□□□ 1.06
TNFSF13O75888 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
TNFSF13O75888 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC21.65■■□□□ 1.06
TNFSF13O75888 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.65■■□□□ 1.06
TNFSF13O75888 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TNFSF13O75888 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TNFSF13O75888 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
TNFSF13O75888 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC21.64■■□□□ 1.05
TNFSF13O75888 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
TNFSF13O75888 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.63■■□□□ 1.05
TNFSF13O75888 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
TNFSF13O75888 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC21.63■■□□□ 1.05
TNFSF13O75888 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TNFSF13O75888 MIR6765-201ENST00000614092 87 ntBASIC21.62■■□□□ 1.05
TNFSF13O75888 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
TNFSF13O75888 AC142086.6-201ENST00000621154 1765 ntBASIC21.61■■□□□ 1.05
TNFSF13O75888 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TNFSF13O75888 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
TNFSF13O75888 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TNFSF13O75888 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TNFSF13O75888 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TNFSF13O75888 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC21.61■■□□□ 1.05
TNFSF13O75888 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TNFSF13O75888 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms