Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NDUFA1O15239 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NDUFA1O15239 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
NDUFA1O15239 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NDUFA1O15239 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
NDUFA1O15239 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NDUFA1O15239 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC16.66■□□□□ 0.26
NDUFA1O15239 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NDUFA1O15239 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
NDUFA1O15239 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC16.66■□□□□ 0.26
NDUFA1O15239 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
NDUFA1O15239 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NDUFA1O15239 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC16.65■□□□□ 0.26
NDUFA1O15239 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NDUFA1O15239 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NDUFA1O15239 DUX4L28-201ENST00000623687 678 ntBASIC16.65■□□□□ 0.26
NDUFA1O15239 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC16.65■□□□□ 0.26
NDUFA1O15239 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NDUFA1O15239 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
NDUFA1O15239 LINC00273-201ENST00000539813 1452 ntBASIC16.65■□□□□ 0.26
NDUFA1O15239 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
NDUFA1O15239 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
NDUFA1O15239 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NDUFA1O15239 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC16.64■□□□□ 0.25
NDUFA1O15239 AP006261.1-201ENST00000584783 668 ntBASIC16.64■□□□□ 0.25
NDUFA1O15239 MIR6090-201ENST00000622481 60 ntBASIC16.64■□□□□ 0.25
NDUFA1O15239 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
NDUFA1O15239 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NDUFA1O15239 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NDUFA1O15239 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NDUFA1O15239 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NDUFA1O15239 WHAMMP2-203ENST00000563942 1603 ntBASIC16.63■□□□□ 0.25
NDUFA1O15239 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC16.63■□□□□ 0.25
NDUFA1O15239 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
NDUFA1O15239 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC16.63■□□□□ 0.25
NDUFA1O15239 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NDUFA1O15239 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NDUFA1O15239 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NDUFA1O15239 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NDUFA1O15239 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
NDUFA1O15239 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
NDUFA1O15239 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NDUFA1O15239 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NDUFA1O15239 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC16.61■□□□□ 0.25
NDUFA1O15239 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
NDUFA1O15239 AC142381.3-201ENST00000568208 1670 ntBASIC16.61■□□□□ 0.25
NDUFA1O15239 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
NDUFA1O15239 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
NDUFA1O15239 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
NDUFA1O15239 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NDUFA1O15239 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NDUFA1O15239 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NDUFA1O15239 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
NDUFA1O15239 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NDUFA1O15239 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NDUFA1O15239 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
NDUFA1O15239 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC16.6■□□□□ 0.25
NDUFA1O15239 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NDUFA1O15239 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NDUFA1O15239 CIB2-204ENST00000557846 934 ntTSL 3 BASIC16.59■□□□□ 0.25
NDUFA1O15239 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NDUFA1O15239 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NDUFA1O15239 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC16.59■□□□□ 0.25
NDUFA1O15239 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC16.59■□□□□ 0.25
NDUFA1O15239 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
NDUFA1O15239 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC16.59■□□□□ 0.25
NDUFA1O15239 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
NDUFA1O15239 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
NDUFA1O15239 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
NDUFA1O15239 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NDUFA1O15239 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NDUFA1O15239 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NDUFA1O15239 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NDUFA1O15239 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
NDUFA1O15239 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NDUFA1O15239 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NDUFA1O15239 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
NDUFA1O15239 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NDUFA1O15239 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC16.56■□□□□ 0.24
NDUFA1O15239 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC16.56■□□□□ 0.24
NDUFA1O15239 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC16.56■□□□□ 0.24
NDUFA1O15239 AC142472.1-201ENST00000612013 1741 ntBASIC16.56■□□□□ 0.24
NDUFA1O15239 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NDUFA1O15239 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NDUFA1O15239 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC16.55■□□□□ 0.24
NDUFA1O15239 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
NDUFA1O15239 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NDUFA1O15239 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC16.55■□□□□ 0.24
NDUFA1O15239 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NDUFA1O15239 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NDUFA1O15239 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NDUFA1O15239 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC16.54■□□□□ 0.24
NDUFA1O15239 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NDUFA1O15239 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
NDUFA1O15239 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
NDUFA1O15239 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC16.54■□□□□ 0.24
NDUFA1O15239 CALM3-209ENST00000597743 577 ntTSL 4 BASIC16.54■□□□□ 0.24
NDUFA1O15239 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NDUFA1O15239 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC16.54■□□□□ 0.24
NDUFA1O15239 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms