Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
NPIPB4C9JG80 DUSP8P4-201ENST00000399538 1761 ntBASIC21.87■■□□□ 1.09
NPIPB4C9JG80 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
NPIPB4C9JG80 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
NPIPB4C9JG80 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
NPIPB4C9JG80 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
NPIPB4C9JG80 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
NPIPB4C9JG80 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
NPIPB4C9JG80 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC21.85■■□□□ 1.09
NPIPB4C9JG80 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
NPIPB4C9JG80 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
NPIPB4C9JG80 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC21.84■■□□□ 1.09
NPIPB4C9JG80 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
NPIPB4C9JG80 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.84■■□□□ 1.09
NPIPB4C9JG80 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
NPIPB4C9JG80 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
NPIPB4C9JG80 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
NPIPB4C9JG80 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.84■■□□□ 1.09
NPIPB4C9JG80 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
NPIPB4C9JG80 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
NPIPB4C9JG80 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.83■■□□□ 1.09
NPIPB4C9JG80 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
NPIPB4C9JG80 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
NPIPB4C9JG80 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.83■■□□□ 1.08
NPIPB4C9JG80 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.83■■□□□ 1.08
NPIPB4C9JG80 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NPIPB4C9JG80 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
NPIPB4C9JG80 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
NPIPB4C9JG80 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
NPIPB4C9JG80 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
NPIPB4C9JG80 MIR639-201ENST00000384974 98 ntBASIC21.81■■□□□ 1.08
NPIPB4C9JG80 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC21.81■■□□□ 1.08
NPIPB4C9JG80 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
NPIPB4C9JG80 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
NPIPB4C9JG80 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
NPIPB4C9JG80 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
NPIPB4C9JG80 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
NPIPB4C9JG80 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NPIPB4C9JG80 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
NPIPB4C9JG80 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
NPIPB4C9JG80 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.8■■□□□ 1.08
NPIPB4C9JG80 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NPIPB4C9JG80 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.8■■□□□ 1.08
NPIPB4C9JG80 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
NPIPB4C9JG80 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
NPIPB4C9JG80 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
NPIPB4C9JG80 AL359504.2-201ENST00000605506 1601 ntBASIC21.79■■□□□ 1.08
NPIPB4C9JG80 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC21.79■■□□□ 1.08
NPIPB4C9JG80 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NPIPB4C9JG80 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NPIPB4C9JG80 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NPIPB4C9JG80 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
NPIPB4C9JG80 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC21.78■■□□□ 1.08
NPIPB4C9JG80 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC21.78■■□□□ 1.08
NPIPB4C9JG80 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
NPIPB4C9JG80 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.78■■□□□ 1.08
NPIPB4C9JG80 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
NPIPB4C9JG80 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NPIPB4C9JG80 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC21.77■■□□□ 1.08
NPIPB4C9JG80 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NPIPB4C9JG80 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NPIPB4C9JG80 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
NPIPB4C9JG80 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NPIPB4C9JG80 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NPIPB4C9JG80 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
NPIPB4C9JG80 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NPIPB4C9JG80 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NPIPB4C9JG80 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NPIPB4C9JG80 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NPIPB4C9JG80 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
NPIPB4C9JG80 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
NPIPB4C9JG80 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
NPIPB4C9JG80 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.76■■□□□ 1.07
NPIPB4C9JG80 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
NPIPB4C9JG80 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
NPIPB4C9JG80 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
NPIPB4C9JG80 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NPIPB4C9JG80 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
NPIPB4C9JG80 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NPIPB4C9JG80 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
NPIPB4C9JG80 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NPIPB4C9JG80 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
NPIPB4C9JG80 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
NPIPB4C9JG80 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC21.73■■□□□ 1.07
NPIPB4C9JG80 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
NPIPB4C9JG80 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NPIPB4C9JG80 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
NPIPB4C9JG80 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
NPIPB4C9JG80 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
NPIPB4C9JG80 PVT1-219ENST00000523427 938 ntTSL 3 BASIC21.72■■□□□ 1.07
NPIPB4C9JG80 AC010501.1-201ENST00000606270 1962 ntBASIC21.72■■□□□ 1.07
NPIPB4C9JG80 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NPIPB4C9JG80 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC21.71■■□□□ 1.07
NPIPB4C9JG80 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
NPIPB4C9JG80 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
NPIPB4C9JG80 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
NPIPB4C9JG80 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NPIPB4C9JG80 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
NPIPB4C9JG80 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
NPIPB4C9JG80 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 10.3 ms