Protein–RNA interactions for Protein: A4QN01

LINC01553, Putative uncharacterized protein encoded by LINC01553, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01553A4QN01 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
LINC01553A4QN01 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC26.6■■□□□ 1.85
LINC01553A4QN01 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
LINC01553A4QN01 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
LINC01553A4QN01 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC26.59■■□□□ 1.85
LINC01553A4QN01 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
LINC01553A4QN01 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC26.59■■□□□ 1.85
LINC01553A4QN01 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
LINC01553A4QN01 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC26.58■■□□□ 1.85
LINC01553A4QN01 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC26.58■■□□□ 1.85
LINC01553A4QN01 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
LINC01553A4QN01 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC26.57■■□□□ 1.84
LINC01553A4QN01 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC26.56■■□□□ 1.84
LINC01553A4QN01 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC26.56■■□□□ 1.84
LINC01553A4QN01 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC26.55■■□□□ 1.84
LINC01553A4QN01 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC26.55■■□□□ 1.84
LINC01553A4QN01 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC26.55■■□□□ 1.84
LINC01553A4QN01 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC26.55■■□□□ 1.84
LINC01553A4QN01 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC26.55■■□□□ 1.84
LINC01553A4QN01 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
LINC01553A4QN01 AL359504.2-201ENST00000605506 1601 ntBASIC26.54■■□□□ 1.84
LINC01553A4QN01 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC26.54■■□□□ 1.84
LINC01553A4QN01 AC239859.2-201ENST00000444165 318 ntBASIC26.54■■□□□ 1.84
LINC01553A4QN01 RNF146-205ENST00000477776 762 ntTSL 3 BASIC26.54■■□□□ 1.84
LINC01553A4QN01 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC26.54■■□□□ 1.84
LINC01553A4QN01 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
LINC01553A4QN01 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
LINC01553A4QN01 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC26.53■■□□□ 1.84
LINC01553A4QN01 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC26.53■■□□□ 1.84
LINC01553A4QN01 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
LINC01553A4QN01 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC26.52■■□□□ 1.84
LINC01553A4QN01 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
LINC01553A4QN01 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC26.52■■□□□ 1.84
LINC01553A4QN01 AC019171.1-201ENST00000601251 1056 ntBASIC26.52■■□□□ 1.84
LINC01553A4QN01 AP002414.2-202ENST00000590929 1450 ntBASIC26.51■■□□□ 1.83
LINC01553A4QN01 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
LINC01553A4QN01 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
LINC01553A4QN01 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
LINC01553A4QN01 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC26.51■■□□□ 1.83
LINC01553A4QN01 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
LINC01553A4QN01 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
LINC01553A4QN01 ABCB10P3-201ENST00000561950 2166 ntBASIC26.49■■□□□ 1.83
LINC01553A4QN01 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC26.49■■□□□ 1.83
LINC01553A4QN01 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC26.49■■□□□ 1.83
LINC01553A4QN01 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC26.49■■□□□ 1.83
LINC01553A4QN01 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC26.49■■□□□ 1.83
LINC01553A4QN01 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
LINC01553A4QN01 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
LINC01553A4QN01 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
LINC01553A4QN01 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
LINC01553A4QN01 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
LINC01553A4QN01 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC26.48■■□□□ 1.83
LINC01553A4QN01 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC26.48■■□□□ 1.83
LINC01553A4QN01 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC26.47■■□□□ 1.83
LINC01553A4QN01 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC26.47■■□□□ 1.83
LINC01553A4QN01 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC26.47■■□□□ 1.83
LINC01553A4QN01 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
LINC01553A4QN01 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC26.47■■□□□ 1.83
LINC01553A4QN01 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC26.47■■□□□ 1.83
LINC01553A4QN01 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
LINC01553A4QN01 MIR935-201ENST00000401179 91 ntBASIC26.46■■□□□ 1.83
LINC01553A4QN01 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC26.46■■□□□ 1.83
LINC01553A4QN01 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
LINC01553A4QN01 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC26.45■■□□□ 1.82
LINC01553A4QN01 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
LINC01553A4QN01 TK2-216ENST00000564917 1156 ntTSL 3 BASIC26.45■■□□□ 1.82
LINC01553A4QN01 Z92544.1-202ENST00000571933 1220 ntBASIC26.45■■□□□ 1.82
LINC01553A4QN01 AC087393.1-201ENST00000582896 145 ntBASIC26.45■■□□□ 1.82
LINC01553A4QN01 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC26.45■■□□□ 1.82
LINC01553A4QN01 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC26.44■■□□□ 1.82
LINC01553A4QN01 CREM-229ENST00000474362 1030 ntTSL 2 BASIC26.44■■□□□ 1.82
LINC01553A4QN01 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC26.43■■□□□ 1.82
LINC01553A4QN01 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
LINC01553A4QN01 LSM7-203ENST00000585409 512 ntTSL 2 BASIC26.43■■□□□ 1.82
LINC01553A4QN01 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC26.43■■□□□ 1.82
LINC01553A4QN01 AC008406.3-201ENST00000620001 1374 ntBASIC26.43■■□□□ 1.82
LINC01553A4QN01 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC26.42■■□□□ 1.82
LINC01553A4QN01 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC26.42■■□□□ 1.82
LINC01553A4QN01 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC26.42■■□□□ 1.82
LINC01553A4QN01 AL139393.2-201ENST00000608721 2025 ntBASIC26.41■■□□□ 1.82
LINC01553A4QN01 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC26.41■■□□□ 1.82
LINC01553A4QN01 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
LINC01553A4QN01 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
LINC01553A4QN01 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC26.4■■□□□ 1.82
LINC01553A4QN01 GRAMD4P7-201ENST00000578182 1232 ntBASIC26.4■■□□□ 1.82
LINC01553A4QN01 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
LINC01553A4QN01 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
LINC01553A4QN01 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC26.39■■□□□ 1.82
LINC01553A4QN01 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC26.39■■□□□ 1.82
LINC01553A4QN01 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.82
LINC01553A4QN01 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC26.39■■□□□ 1.81
LINC01553A4QN01 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC26.38■■□□□ 1.81
LINC01553A4QN01 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
LINC01553A4QN01 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
LINC01553A4QN01 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
LINC01553A4QN01 LONRF2P2-201ENST00000439212 571 ntBASIC26.37■■□□□ 1.81
LINC01553A4QN01 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
LINC01553A4QN01 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC26.37■■□□□ 1.81
LINC01553A4QN01 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
LINC01553A4QN01 RPS2P7-201ENST00000447334 885 ntBASIC26.36■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms