Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SHISA3A0PJX4 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
SHISA3A0PJX4 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
SHISA3A0PJX4 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
SHISA3A0PJX4 AL139125.2-201ENST00000623134 1869 ntBASIC21.46■■□□□ 1.03
SHISA3A0PJX4 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SHISA3A0PJX4 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SHISA3A0PJX4 AC138932.3-201ENST00000567634 1902 ntBASIC21.46■■□□□ 1.03
SHISA3A0PJX4 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SHISA3A0PJX4 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SHISA3A0PJX4 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SHISA3A0PJX4 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SHISA3A0PJX4 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
SHISA3A0PJX4 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC21.45■■□□□ 1.02
SHISA3A0PJX4 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SHISA3A0PJX4 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SHISA3A0PJX4 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC21.45■■□□□ 1.02
SHISA3A0PJX4 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
SHISA3A0PJX4 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.44■■□□□ 1.02
SHISA3A0PJX4 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
SHISA3A0PJX4 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC21.44■■□□□ 1.02
SHISA3A0PJX4 EI24-212ENST00000615917 1407 ntTSL 2 BASIC21.44■■□□□ 1.02
SHISA3A0PJX4 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SHISA3A0PJX4 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SHISA3A0PJX4 RPS2-209ENST00000529806 993 ntTSL 3 BASIC21.43■■□□□ 1.02
SHISA3A0PJX4 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SHISA3A0PJX4 AC022211.4-201ENST00000625094 2161 ntBASIC21.43■■□□□ 1.02
SHISA3A0PJX4 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
SHISA3A0PJX4 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SHISA3A0PJX4 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.41■■□□□ 1.02
SHISA3A0PJX4 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SHISA3A0PJX4 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SHISA3A0PJX4 MIR6090-201ENST00000622481 60 ntBASIC21.41■■□□□ 1.02
SHISA3A0PJX4 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
SHISA3A0PJX4 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
SHISA3A0PJX4 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SHISA3A0PJX4 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21.39■■□□□ 1.02
SHISA3A0PJX4 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
SHISA3A0PJX4 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.39■■□□□ 1.01
SHISA3A0PJX4 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC21.39■■□□□ 1.01
SHISA3A0PJX4 WHAMMP3-201ENST00000611636 1609 ntBASIC21.39■■□□□ 1.01
SHISA3A0PJX4 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SHISA3A0PJX4 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC21.39■■□□□ 1.01
SHISA3A0PJX4 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SHISA3A0PJX4 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
SHISA3A0PJX4 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SHISA3A0PJX4 CHML-205ENST00000638160 705 ntTSL 3 BASIC21.38■■□□□ 1.01
SHISA3A0PJX4 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SHISA3A0PJX4 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SHISA3A0PJX4 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SHISA3A0PJX4 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SHISA3A0PJX4 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SHISA3A0PJX4 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SHISA3A0PJX4 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SHISA3A0PJX4 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC21.37■■□□□ 1.01
SHISA3A0PJX4 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
SHISA3A0PJX4 AC097358.2-201ENST00000607541 1159 ntBASIC21.37■■□□□ 1.01
SHISA3A0PJX4 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SHISA3A0PJX4 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SHISA3A0PJX4 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SHISA3A0PJX4 AC133561.1-201ENST00000568600 2415 ntBASIC21.37■■□□□ 1.01
SHISA3A0PJX4 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SHISA3A0PJX4 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SHISA3A0PJX4 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SHISA3A0PJX4 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SHISA3A0PJX4 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SHISA3A0PJX4 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SHISA3A0PJX4 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SHISA3A0PJX4 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SHISA3A0PJX4 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.35■■□□□ 1.01
SHISA3A0PJX4 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SHISA3A0PJX4 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.35■■□□□ 1.01
SHISA3A0PJX4 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.35■■□□□ 1.01
SHISA3A0PJX4 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SHISA3A0PJX4 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC21.34■■□□□ 1.01
SHISA3A0PJX4 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.34■■□□□ 1.01
SHISA3A0PJX4 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SHISA3A0PJX4 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SHISA3A0PJX4 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.34■■□□□ 1.01
SHISA3A0PJX4 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SHISA3A0PJX4 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SHISA3A0PJX4 AC108673.1-201ENST00000510422 1159 ntBASIC21.33■■□□□ 1.01
SHISA3A0PJX4 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SHISA3A0PJX4 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
SHISA3A0PJX4 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
SHISA3A0PJX4 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
SHISA3A0PJX4 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1
SHISA3A0PJX4 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
SHISA3A0PJX4 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC21.33■■□□□ 1
SHISA3A0PJX4 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.32■■□□□ 1
SHISA3A0PJX4 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
SHISA3A0PJX4 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC21.32■■□□□ 1
SHISA3A0PJX4 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
SHISA3A0PJX4 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC21.32■■□□□ 1
SHISA3A0PJX4 PEX7-203ENST00000541292 945 ntTSL 5 BASIC21.32■■□□□ 1
SHISA3A0PJX4 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC21.32■■□□□ 1
SHISA3A0PJX4 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SHISA3A0PJX4 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC21.31■■□□□ 1
SHISA3A0PJX4 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SHISA3A0PJX4 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms