Protein–RNA interactions for Protein: A0A0J9YX44

TRBV5-5, T-cell receptor beta variable 5-5 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-5A0A0J9YX44 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRBV5-5A0A0J9YX44 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.33■■□□□ 1.01
TRBV5-5A0A0J9YX44 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
TRBV5-5A0A0J9YX44 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
TRBV5-5A0A0J9YX44 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
TRBV5-5A0A0J9YX44 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.32■■□□□ 1
TRBV5-5A0A0J9YX44 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
TRBV5-5A0A0J9YX44 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRBV5-5A0A0J9YX44 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.32■■□□□ 1
TRBV5-5A0A0J9YX44 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
TRBV5-5A0A0J9YX44 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
TRBV5-5A0A0J9YX44 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.31■■□□□ 1
TRBV5-5A0A0J9YX44 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRBV5-5A0A0J9YX44 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRBV5-5A0A0J9YX44 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
TRBV5-5A0A0J9YX44 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.3■■□□□ 1
TRBV5-5A0A0J9YX44 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC21.3■■□□□ 1
TRBV5-5A0A0J9YX44 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
TRBV5-5A0A0J9YX44 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TRBV5-5A0A0J9YX44 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.29■■□□□ 1
TRBV5-5A0A0J9YX44 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRBV5-5A0A0J9YX44 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC21.29■■□□□ 1
TRBV5-5A0A0J9YX44 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
TRBV5-5A0A0J9YX44 NRG1-221ENST00000614767 762 ntTSL 5 BASIC21.29■■□□□ 1
TRBV5-5A0A0J9YX44 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRBV5-5A0A0J9YX44 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
TRBV5-5A0A0J9YX44 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.28■■□□□ 1
TRBV5-5A0A0J9YX44 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC21.28■■□□□ 1
TRBV5-5A0A0J9YX44 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.28■■□□□ 1
TRBV5-5A0A0J9YX44 AC142381.3-201ENST00000568208 1670 ntBASIC21.28■■□□□ 1
TRBV5-5A0A0J9YX44 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
TRBV5-5A0A0J9YX44 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
TRBV5-5A0A0J9YX44 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRBV5-5A0A0J9YX44 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC21.27■■□□□ 1
TRBV5-5A0A0J9YX44 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC21.27■■□□□ 1
TRBV5-5A0A0J9YX44 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC21.27■■□□□ 1
TRBV5-5A0A0J9YX44 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
TRBV5-5A0A0J9YX44 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
TRBV5-5A0A0J9YX44 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
TRBV5-5A0A0J9YX44 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC21.26■□□□□ 0.99
TRBV5-5A0A0J9YX44 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRBV5-5A0A0J9YX44 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRBV5-5A0A0J9YX44 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC21.26■□□□□ 0.99
TRBV5-5A0A0J9YX44 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
TRBV5-5A0A0J9YX44 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRBV5-5A0A0J9YX44 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
TRBV5-5A0A0J9YX44 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TRBV5-5A0A0J9YX44 AC044849.2-201ENST00000606596 710 ntBASIC21.24■□□□□ 0.99
TRBV5-5A0A0J9YX44 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TRBV5-5A0A0J9YX44 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.24■□□□□ 0.99
TRBV5-5A0A0J9YX44 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
TRBV5-5A0A0J9YX44 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
TRBV5-5A0A0J9YX44 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TRBV5-5A0A0J9YX44 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.23■□□□□ 0.99
TRBV5-5A0A0J9YX44 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TRBV5-5A0A0J9YX44 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
TRBV5-5A0A0J9YX44 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRBV5-5A0A0J9YX44 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TRBV5-5A0A0J9YX44 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRBV5-5A0A0J9YX44 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRBV5-5A0A0J9YX44 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRBV5-5A0A0J9YX44 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
TRBV5-5A0A0J9YX44 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
TRBV5-5A0A0J9YX44 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC21.22■□□□□ 0.99
TRBV5-5A0A0J9YX44 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRBV5-5A0A0J9YX44 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRBV5-5A0A0J9YX44 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.21■□□□□ 0.99
TRBV5-5A0A0J9YX44 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
TRBV5-5A0A0J9YX44 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRBV5-5A0A0J9YX44 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRBV5-5A0A0J9YX44 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC21.21■□□□□ 0.99
TRBV5-5A0A0J9YX44 AC021231.2-201ENST00000594613 730 ntBASIC21.21■□□□□ 0.99
TRBV5-5A0A0J9YX44 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.21■□□□□ 0.99
TRBV5-5A0A0J9YX44 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TRBV5-5A0A0J9YX44 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TRBV5-5A0A0J9YX44 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRBV5-5A0A0J9YX44 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRBV5-5A0A0J9YX44 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRBV5-5A0A0J9YX44 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRBV5-5A0A0J9YX44 AL162393.1-201ENST00000437852 946 ntBASIC21.2■□□□□ 0.98
TRBV5-5A0A0J9YX44 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC21.2■□□□□ 0.98
TRBV5-5A0A0J9YX44 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRBV5-5A0A0J9YX44 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRBV5-5A0A0J9YX44 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
TRBV5-5A0A0J9YX44 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRBV5-5A0A0J9YX44 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TRBV5-5A0A0J9YX44 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRBV5-5A0A0J9YX44 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRBV5-5A0A0J9YX44 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRBV5-5A0A0J9YX44 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
TRBV5-5A0A0J9YX44 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRBV5-5A0A0J9YX44 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.18■□□□□ 0.98
TRBV5-5A0A0J9YX44 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRBV5-5A0A0J9YX44 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21.18■□□□□ 0.98
TRBV5-5A0A0J9YX44 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TRBV5-5A0A0J9YX44 BOD1-206ENST00000480951 814 ntTSL 2 BASIC21.18■□□□□ 0.98
TRBV5-5A0A0J9YX44 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC21.18■□□□□ 0.98
TRBV5-5A0A0J9YX44 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TRBV5-5A0A0J9YX44 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
TRBV5-5A0A0J9YX44 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms