Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 TRMT2A-217ENST00000488335 379 ntTSL 316.22■□□□□ 0.193e-8■□□□□ 9.4
SRSF1Q07955 TRMT2A-208ENST00000459644 582 ntTSL 314.22□□□□□ -0.133e-8■□□□□ 9.4
SRSF1Q07955 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC16.08■□□□□ 0.172e-9■□□□□ 9.4
SRSF1Q07955 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.022e-9■□□□□ 9.4
SRSF1Q07955 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.092e-9■□□□□ 9.4
SRSF1Q07955 SNRPN-210ENST00000584968 908 ntTSL 514.24□□□□□ -0.132e-9■□□□□ 9.4
SRSF1Q07955 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.172e-9■□□□□ 9.4
SRSF1Q07955 SNRPN-209ENST00000579070 871 ntTSL 313.09□□□□□ -0.312e-9■□□□□ 9.4
SRSF1Q07955 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.322e-9■□□□□ 9.4
SRSF1Q07955 SNURF-203ENST00000580062 796 ntTSL 312.73□□□□□ -0.372e-9■□□□□ 9.4
SRSF1Q07955 SNRPN-208ENST00000577565 1298 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.452e-9■□□□□ 9.4
SRSF1Q07955 SNRPN-205ENST00000400100 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.472e-9■□□□□ 9.4
SRSF1Q07955 FANCA-207ENST00000561667 528 ntTSL 411.46□□□□□ -0.572e-7■□□□□ 9.4
SRSF1Q07955 SNURF-202ENST00000577949 650 ntAPPRIS P1 TSL 2 BASIC9.01□□□□□ -0.972e-9■□□□□ 9.4
SRSF1Q07955 SNRPN-204ENST00000400098 525 ntTSL 48.21□□□□□ -1.12e-9■□□□□ 9.4
SRSF1Q07955 SNRPN-206ENST00000553597 849 ntTSL 37.19□□□□□ -1.262e-9■□□□□ 9.4
SRSF1Q07955 AC124312.1-202ENST00000557230 669 ntAPPRIS ALT2 TSL 56.86□□□□□ -1.312e-9■□□□□ 9.4
SRSF1Q07955 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC5.9□□□□□ -1.472e-9■□□□□ 9.4
SRSF1Q07955 PLXNB1-206ENST00000462738 663 ntTSL 219.51■□□□□ 0.713e-9■□□□□ 9.4
SRSF1Q07955 PLXNB1-217ENST00000484485 560 ntTSL 417.17■□□□□ 0.343e-9■□□□□ 9.4
SRSF1Q07955 PLXNB1-203ENST00000449094 3863 ntTSL 29.59□□□□□ -0.873e-9■□□□□ 9.4
SRSF1Q07955 TARS-216ENST00000627006 171 ntTSL 5 BASIC9.16□□□□□ -0.942e-8■□□□□ 9.4
SRSF1Q07955 SLC3A2-219ENST00000542793 539 ntTSL 27.25□□□□□ -1.256e-9■□□□□ 9.4
SRSF1Q07955 SLC3A2-214ENST00000539507 534 ntTSL 36.83□□□□□ -1.326e-9■□□□□ 9.4
SRSF1Q07955 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.71□□□□□ -2.682e-8■□□□□ 9.4
SRSF1Q07955 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.033e-6■□□□□ 9.4
SRSF1Q07955 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.63e-6■□□□□ 9.4
SRSF1Q07955 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.533e-6■□□□□ 9.4
SRSF1Q07955 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC13.19□□□□□ -0.39e-9■□□□□ 9.4
SRSF1Q07955 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.4■□□□□ 0.73e-8■□□□□ 9.4
SRSF1Q07955 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17.47■□□□□ 0.393e-8■□□□□ 9.4
SRSF1Q07955 TRA2B-206ENST00000456380 1697 ntTSL 512.37□□□□□ -0.433e-8■□□□□ 9.4
SRSF1Q07955 TRA2B-208ENST00000465245 634 ntTSL 312.32□□□□□ -0.443e-8■□□□□ 9.4
SRSF1Q07955 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.483e-8■□□□□ 9.4
SRSF1Q07955 TRA2B-212ENST00000480461 538 ntTSL 1 (best)11.77□□□□□ -0.533e-8■□□□□ 9.4
SRSF1Q07955 TRA2B-213ENST00000485530 839 ntTSL 211.77□□□□□ -0.533e-8■□□□□ 9.4
SRSF1Q07955 UBAC1-202ENST00000465873 882 ntTSL 215.38■□□□□ 0.051e-8■□□□□ 9.4
SRSF1Q07955 SPATA20-206ENST00000504265 877 ntTSL 220.06■□□□□ 0.82e-6■□□□□ 9.4
SRSF1Q07955 SPATA20-223ENST00000513618 629 ntTSL 217.42■□□□□ 0.382e-6■□□□□ 9.4
SRSF1Q07955 SPATA20-217ENST00000511347 1035 ntTSL 514.84□□□□□ -0.032e-6■□□□□ 9.4
SRSF1Q07955 SPATA20-228ENST00000635113 1706 ntTSL 1 (best)11.77□□□□□ -0.522e-6■□□□□ 9.4
SRSF1Q07955 ADNP2-204ENST00000560752 880 ntTSL 526.88■■□□□ 1.892e-6■□□□□ 9.4
SRSF1Q07955 ADNP2-202ENST00000559951 823 ntTSL 320.66■□□□□ 0.92e-6■□□□□ 9.4
SRSF1Q07955 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.052e-6■□□□□ 9.4
SRSF1Q07955 ADNP2-205ENST00000561195 124 ntTSL 37.33□□□□□ -1.242e-6■□□□□ 9.4
SRSF1Q07955 ADNP2-203ENST00000560561 647 ntTSL 34.98□□□□□ -1.612e-6■□□□□ 9.4
SRSF1Q07955 ANKRD10-208ENST00000485844 641 ntTSL 27.38□□□□□ -1.231e-6■□□□□ 9.4
SRSF1Q07955 ANKRD10-211ENST00000603993 704 ntTSL 26.92□□□□□ -1.31e-6■□□□□ 9.4
SRSF1Q07955 FAM50A-203ENST00000464419 1470 ntTSL 521.2■□□□□ 0.987e-8■□□□□ 9.3
SRSF1Q07955 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.327e-8■□□□□ 9.3
SRSF1Q07955 SLC2A9-206ENST00000505104 1659 ntTSL 1 (best)14.62□□□□□ -0.073e-6■□□□□ 9.3
SRSF1Q07955 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.353e-6■□□□□ 9.3
SRSF1Q07955 CTNNB1-212ENST00000471014 607 ntTSL 312.61□□□□□ -0.397e-10■□□□□ 9.3
SRSF1Q07955 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.423e-6■□□□□ 9.3
SRSF1Q07955 SLC2A9-208ENST00000506583 1927 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.763e-6■□□□□ 9.3
SRSF1Q07955 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.33e-6■□□□□ 9.3
SRSF1Q07955 LSM7-203ENST00000585409 512 ntTSL 2 BASIC22.77■■□□□ 1.243e-6■□□□□ 9.3
SRSF1Q07955 LSM7-202ENST00000585395 621 ntTSL 322.44■■□□□ 1.183e-6■□□□□ 9.3
SRSF1Q07955 NME4-204ENST00000433358 966 ntTSL 322.23■■□□□ 1.153e-6■□□□□ 9.3
SRSF1Q07955 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC22■■□□□ 1.113e-6■□□□□ 9.3
SRSF1Q07955 NME4-206ENST00000448828 1167 ntTSL 221.51■■□□□ 1.033e-6■□□□□ 9.3
SRSF1Q07955 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.983e-6■□□□□ 9.3
SRSF1Q07955 NME4-209ENST00000460297 1652 ntTSL 520.8■□□□□ 0.923e-6■□□□□ 9.3
SRSF1Q07955 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.44■□□□□ 0.863e-6■□□□□ 9.3
SRSF1Q07955 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.44■□□□□ 0.863e-6■□□□□ 9.3
SRSF1Q07955 NME4-205ENST00000444498 1111 ntTSL 317.56■□□□□ 0.43e-6■□□□□ 9.3
SRSF1Q07955 PPAN-207ENST00000468881 627 ntTSL 217.42■□□□□ 0.383e-6■□□□□ 9.3
SRSF1Q07955 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.21■□□□□ 0.353e-6■□□□□ 9.3
SRSF1Q07955 CDK10-212ENST00000510811 1376 ntTSL 217.11■□□□□ 0.335e-6■□□□□ 9.3
SRSF1Q07955 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.73■□□□□ 0.275e-6■□□□□ 9.3
SRSF1Q07955 HGS-212ENST00000575058 632 ntTSL 315.75■□□□□ 0.111e-8■□□□□ 9.3
SRSF1Q07955 MYO9B-210ENST00000597572 660 ntTSL 515.69■□□□□ 0.13e-6■□□□□ 9.3
SRSF1Q07955 MYO9B-208ENST00000596942 584 ntTSL 515.4■□□□□ 0.063e-6■□□□□ 9.3
SRSF1Q07955 MYO9B-209ENST00000597073 2087 ntTSL 515.36■□□□□ 0.053e-6■□□□□ 9.3
SRSF1Q07955 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.043e-6■□□□□ 9.3
SRSF1Q07955 CDK10-210ENST00000507205 1215 ntTSL 215.25■□□□□ 0.035e-6■□□□□ 9.3
SRSF1Q07955 CDK10-209ENST00000505733 1703 ntTSL 215.03■□□□□ -05e-6■□□□□ 9.3
SRSF1Q07955 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.013e-6■□□□□ 9.3
SRSF1Q07955 MYO9B-213ENST00000598419 544 ntTSL 514.97□□□□□ -0.013e-6■□□□□ 9.3
SRSF1Q07955 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.045e-6■□□□□ 9.3
SRSF1Q07955 NME4-208ENST00000454619 719 ntTSL 514.39□□□□□ -0.113e-6■□□□□ 9.3
SRSF1Q07955 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.38□□□□□ -0.113e-6■□□□□ 9.3
SRSF1Q07955 HGS-208ENST00000572392 824 ntTSL 514.38□□□□□ -0.113e-6■□□□□ 9.3
SRSF1Q07955 LSM7-207ENST00000591745 543 ntTSL 213.35□□□□□ -0.273e-6■□□□□ 9.3
SRSF1Q07955 MYO9B-211ENST00000597881 432 ntTSL 513.1□□□□□ -0.313e-6■□□□□ 9.3
SRSF1Q07955 NME4-203ENST00000397722 1232 ntTSL 2 BASIC13.03□□□□□ -0.323e-6■□□□□ 9.3
SRSF1Q07955 LINC00969-322ENST00000630170 584 ntTSL 5 BASIC12.4□□□□□ -0.423e-6■□□□□ 9.3
SRSF1Q07955 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.455e-10■□□□□ 9.3
SRSF1Q07955 CDK10-204ENST00000472018 2532 ntTSL 212.08□□□□□ -0.485e-6■□□□□ 9.3
SRSF1Q07955 CDK10-217ENST00000564192 897 ntTSL 512.04□□□□□ -0.485e-6■□□□□ 9.3
SRSF1Q07955 LINC00969-285ENST00000627152 846 ntTSL 511.8□□□□□ -0.523e-6■□□□□ 9.3
SRSF1Q07955 LINC00969-321ENST00000629990 806 ntTSL 5 BASIC11.59□□□□□ -0.553e-6■□□□□ 9.3
SRSF1Q07955 LINC00969-236ENST00000599448 780 ntTSL 511.5□□□□□ -0.573e-6■□□□□ 9.3
SRSF1Q07955 LINC00969-342ENST00000631366 751 ntTSL 511.5□□□□□ -0.573e-6■□□□□ 9.3
SRSF1Q07955 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC11.47□□□□□ -0.573e-6■□□□□ 9.3
SRSF1Q07955 LINC00969-331ENST00000630863 954 ntTSL 511.31□□□□□ -0.63e-6■□□□□ 9.3
SRSF1Q07955 LARS-213ENST00000511505 1089 ntTSL 511.28□□□□□ -0.63e-6■□□□□ 9.3
SRSF1Q07955 LINC00969-204ENST00000420851 868 ntTSL 5 BASIC11.12□□□□□ -0.633e-6■□□□□ 9.3
SRSF1Q07955 LINC00969-235ENST00000598992 1005 ntTSL 511.12□□□□□ -0.633e-6■□□□□ 9.3
SRSF1Q07955 LINC00969-312ENST00000628823 616 ntTSL 510.94□□□□□ -0.663e-6■□□□□ 9.3
Retrieved 100 of 14,836 protein–RNA pairs in 297 ms