RNA–Protein interactions for RNA: ENST00000579070.5

SNRPN-209, Transcript of small nuclear ribonucleoprotein polypeptide N, humanhuman

TSL 3

Gene SNRPN, Length 871 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPN-209ENST00000579070 NISCHQ9Y2I1 1504 aa34.9■■■■□ 3.18
SNRPN-209ENST00000579070 CCDC180Q9P1Z9 1646 aa30.91■■■□□ 2.54
SNRPN-209ENST00000579070 ABCC9O60706 1549 aa30.06■■■□□ 2.4
SNRPN-209ENST00000579070 ZCCHC6Q5VYS8 1495 aaKnown RBP29.15■■■□□ 2.26
SNRPN-209ENST00000579070 DCAF8L2P0C7V8 631 aa29.06■■■□□ 2.24
SNRPN-209ENST00000579070 NACADO15069 1562 aa29.01■■■□□ 2.23
SNRPN-209ENST00000579070 RB1CC1Q8TDY2 1594 aa29■■■□□ 2.23
SNRPN-209ENST00000579070 MYO15BQ96JP2 1530 aa28.9■■■□□ 2.22
SNRPN-209ENST00000579070 DCAF1Q9Y4B6 1507 aa28.87■■■□□ 2.21
SNRPN-209ENST00000579070 UNC13AQ9UPW8 1703 aa28.26■■■□□ 2.12
SNRPN-209ENST00000579070 SCRIBQ14160 1630 aa28.26■■■□□ 2.11
SNRPN-209ENST00000579070 PABPN1Q86U42 306 aaKnown RBP eCLIP28.12■■■□□ 2.09
SNRPN-209ENST00000579070 BICRAQ9NZM4 1560 aa28.1■■■□□ 2.09
SNRPN-209ENST00000579070 SHROOM4Q9ULL8 1493 aa27.85■■■□□ 2.05
SNRPN-209ENST00000579070 EIF4G1Q04637 1599 aaKnown RBP27.36■■□□□ 1.97
SNRPN-209ENST00000579070 DNAJC5BQ9UF47 199 aa27.33■■□□□ 1.97
SNRPN-209ENST00000579070 CC2D2AQ9P2K1 1620 aa27.17■■□□□ 1.94
SNRPN-209ENST00000579070 CECR2Q9BXF3 1484 aa27.16■■□□□ 1.94
SNRPN-209ENST00000579070 BAZ1AQ9NRL2 1556 aaPredicted RBP27.04■■□□□ 1.92
SNRPN-209ENST00000579070 SMARCA4P51532 1647 aa27.03■■□□□ 1.92
SNRPN-209ENST00000579070 MROH2BQ7Z745 1585 aa26.9■■□□□ 1.9
SNRPN-209ENST00000579070 ATAD2BQ9ULI0 1458 aa26.83■■□□□ 1.89
SNRPN-209ENST00000579070 SMARCA2P51531 1590 aa26.81■■□□□ 1.88
SNRPN-209ENST00000579070 NCAPD3P42695 1498 aa26.76■■□□□ 1.87
SNRPN-209ENST00000579070 PEG3Q9GZU2 1588 aa26.75■■□□□ 1.87
SNRPN-209ENST00000579070 HMGXB3Q12766 1538 aa26.68■■□□□ 1.86
SNRPN-209ENST00000579070 RSF1Q96T23 1441 aaPredicted RBP26.67■■□□□ 1.86
SNRPN-209ENST00000579070 BAZ1BQ9UIG0 1483 aaKnown RBP26.64■■□□□ 1.86
SNRPN-209ENST00000579070 WIZO95785 1651 aa26.6■■□□□ 1.85
SNRPN-209ENST00000579070 TOP2AP11388 1531 aaKnown RBP26.38■■□□□ 1.81
SNRPN-209ENST00000579070 SUPT5HO00267 1087 aaKnown RBP26.19■■□□□ 1.78
SNRPN-209ENST00000579070 NESP48681 1621 aa26.07■■□□□ 1.76
SNRPN-209ENST00000579070 CCDC88BA6NC98 1476 aa26.04■■□□□ 1.76
SNRPN-209ENST00000579070 LAMC3Q9Y6N6 1575 aa26.03■■□□□ 1.76
SNRPN-209ENST00000579070 CADPSQ9ULU8 1353 aa26.01■■□□□ 1.75
SNRPN-209ENST00000579070 ERCC6Q03468 1493 aa25.91■■□□□ 1.74
SNRPN-209ENST00000579070 CFTRP13569 1480 aa25.9■■□□□ 1.74
SNRPN-209ENST00000579070 PDS5BQ9NTI5 1447 aa25.86■■□□□ 1.73
SNRPN-209ENST00000579070 KIF21AQ7Z4S6 1674 aa25.74■■□□□ 1.71
SNRPN-209ENST00000579070 FANCD2Q9BXW9 1451 aa25.72■■□□□ 1.71
SNRPN-209ENST00000579070 CEP164Q9UPV0 1460 aa25.69■■□□□ 1.7
SNRPN-209ENST00000579070 PRDM2Q13029 1718 aa25.67■■□□□ 1.7
SNRPN-209ENST00000579070 THOC2Q8NI27 1593 aaKnown RBP25.63■■□□□ 1.69
SNRPN-209ENST00000579070 MRC2Q9UBG0 1479 aa25.6■■□□□ 1.69
SNRPN-209ENST00000579070 CUX2O14529 1486 aa25.53■■□□□ 1.68
SNRPN-209ENST00000579070 WDR62O43379 1518 aa25.5■■□□□ 1.67
SNRPN-209ENST00000579070 URB2Q14146 1524 aaKnown RBP25.45■■□□□ 1.66
SNRPN-209ENST00000579070 TOPBP1Q92547 1522 aa25.34■■□□□ 1.65
SNRPN-209ENST00000579070 DNMBPQ6XZF7 1577 aa25.33■■□□□ 1.65
SNRPN-209ENST00000579070 ABCC8Q09428 1581 aa25.32■■□□□ 1.64
SNRPN-209ENST00000579070 CUX1P39880 1505 aa25.23■■□□□ 1.63
SNRPN-209ENST00000579070 WRNQ14191 1432 aaPredicted RBP eCLIP25.17■■□□□ 1.62
SNRPN-209ENST00000579070 POLA1P09884 1462 aaPredicted RBP25.15■■□□□ 1.62
SNRPN-209ENST00000579070 IFT140Q96RY7 1462 aa25.13■■□□□ 1.61
SNRPN-209ENST00000579070 FGD5Q6ZNL6 1462 aa25.12■■□□□ 1.61
SNRPN-209ENST00000579070 SYNJ1O43426 1573 aa25.09■■□□□ 1.61
SNRPN-209ENST00000579070 TOP2BQ02880 1626 aa25.06■■□□□ 1.6
SNRPN-209ENST00000579070 BIVM-ERCC5R4GMW8 1640 aa25.05■■□□□ 1.6
SNRPN-209ENST00000579070 SOGA1O94964 1423 aa25.03■■□□□ 1.6
SNRPN-209ENST00000579070 RAD54L2Q9Y4B4 1467 aa25.03■■□□□ 1.6
SNRPN-209ENST00000579070 TARBP1Q13395 1621 aaKnown RBP25.02■■□□□ 1.6
SNRPN-209ENST00000579070 ZNF608Q9ULD9 1512 aaPredicted RBP24.99■■□□□ 1.59
SNRPN-209ENST00000579070 EIF4G3O43432 1585 aaKnown RBP24.91■■□□□ 1.58
SNRPN-209ENST00000579070 ABCA10Q8WWZ4 1543 aa24.87■■□□□ 1.57
SNRPN-209ENST00000579070 WDR97A6NE52 1622 aa24.87■■□□□ 1.57
SNRPN-209ENST00000579070 TDRD9Q8NDG6 1382 aaKnown RBP24.87■■□□□ 1.57
SNRPN-209ENST00000579070 AQRO60306 1485 aaKnown RBP eCLIP24.87■■□□□ 1.571e-6■□□□□ 10.6
SNRPN-209ENST00000579070 GAPVD1Q14C86 1478 aa24.76■■□□□ 1.55
SNRPN-209ENST00000579070 ABCA5Q8WWZ7 1642 aa24.75■■□□□ 1.55
SNRPN-209ENST00000579070 GRIN2BQ13224 1484 aa24.72■■□□□ 1.55
SNRPN-209ENST00000579070 TRIM41Q8WV44 630 aa24.71■■□□□ 1.55
SNRPN-209ENST00000579070 SNAPC4Q5SXM2 1469 aa24.68■■□□□ 1.54
SNRPN-209ENST00000579070 PBRM1Q86U86 1689 aa24.66■■□□□ 1.54
SNRPN-209ENST00000579070 MAGI1Q96QZ7 1491 aaPredicted RBP24.63■■□□□ 1.53
SNRPN-209ENST00000579070 KIF27Q86VH2 1401 aa24.62■■□□□ 1.53
SNRPN-209ENST00000579070 ERICH3Q5RHP9 1530 aa24.58■■□□□ 1.53
SNRPN-209ENST00000579070 CHIC1Q5VXU3 224 aa24.55■■□□□ 1.52
SNRPN-209ENST00000579070 SYNJ2O15056 1496 aa24.54■■□□□ 1.52
SNRPN-209ENST00000579070 FBLN2P98095 1184 aa24.54■■□□□ 1.52
SNRPN-209ENST00000579070 ADAMTS12P58397 1594 aa24.53■■□□□ 1.52
SNRPN-209ENST00000579070 CHD1O14646 1710 aa24.5■■□□□ 1.51
SNRPN-209ENST00000579070 CHMP7Q8WUX9 453 aaPredicted RBP24.49■■□□□ 1.51
SNRPN-209ENST00000579070 FHAD1B1AJZ9 1412 aa24.48■■□□□ 1.51
SNRPN-209ENST00000579070 OSCARQ8IYS5 282 aa24.47■■□□□ 1.51
SNRPN-209ENST00000579070 IGF1RP08069 1367 aa24.46■■□□□ 1.51
SNRPN-209ENST00000579070 RUSC2Q8N2Y8 1516 aa24.45■■□□□ 1.51
SNRPN-209ENST00000579070 DNAJC5Q9H3Z4 198 aa24.42■■□□□ 1.5
SNRPN-209ENST00000579070 GRIN2AQ12879 1464 aa24.41■■□□□ 1.5
SNRPN-209ENST00000579070 CUL7Q14999 1698 aa24.4■■□□□ 1.5
SNRPN-209ENST00000579070 CARMIL1Q5VZK9 1371 aa24.33■■□□□ 1.49
SNRPN-209ENST00000579070 EEA1Q15075 1411 aa24.3■■□□□ 1.48
SNRPN-209ENST00000579070 NUP160Q12769 1436 aa24.28■■□□□ 1.48
SNRPN-209ENST00000579070 CLASP1Q7Z460 1538 aa24.28■■□□□ 1.48
SNRPN-209ENST00000579070 CEP170Q5SW79 1584 aa24.28■■□□□ 1.48
SNRPN-209ENST00000579070 RAPGEF2Q9Y4G8 1499 aa24.23■■□□□ 1.47
SNRPN-209ENST00000579070 FAM9AQ8IZU1 332 aaPredicted RBP24.22■■□□□ 1.47
SNRPN-209ENST00000579070 CSRNP3Q8WYN3 585 aa24.21■■□□□ 1.47
SNRPN-209ENST00000579070 PRXQ9BXM0 1461 aa24.19■■□□□ 1.46
SNRPN-209ENST00000579070 ARHGEF11O15085 1522 aa24.12■■□□□ 1.45
SNRPN-209ENST00000579070 KIAA0586Q9BVV6 1533 aa24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms