RNA–Protein interactions for RNA: ENST00000450036.1

NME4-207, Transcript of NME/NM23 nucleoside diphosphate kinase 4, humanhuman

TSL 3 BASIC

Gene NME4, Length 985 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME4-207ENST00000450036 NISCHQ9Y2I1 1504 aa37.41■■■■□ 3.58
NME4-207ENST00000450036 CCDC180Q9P1Z9 1646 aa33.42■■■□□ 2.94
NME4-207ENST00000450036 ABCC9O60706 1549 aa33.12■■■□□ 2.89
NME4-207ENST00000450036 RB1CC1Q8TDY2 1594 aa31.7■■■□□ 2.67
NME4-207ENST00000450036 NACADO15069 1562 aa31.56■■■□□ 2.64
NME4-207ENST00000450036 DCAF8L2P0C7V8 631 aa31.44■■■□□ 2.62
NME4-207ENST00000450036 ZCCHC6Q5VYS8 1495 aaKnown RBP31.27■■■□□ 2.6
NME4-207ENST00000450036 MYO15BQ96JP2 1530 aa31.24■■■□□ 2.59
NME4-207ENST00000450036 DCAF1Q9Y4B6 1507 aa30.93■■■□□ 2.54
NME4-207ENST00000450036 PABPN1Q86U42 306 aaKnown RBP eCLIP30.87■■■□□ 2.531e-8■■□□□ 14.2
NME4-207ENST00000450036 UNC13AQ9UPW8 1703 aa30.82■■■□□ 2.52
NME4-207ENST00000450036 DNAJC5BQ9UF47 199 aa30.72■■■□□ 2.51
NME4-207ENST00000450036 BICRAQ9NZM4 1560 aa30.67■■■□□ 2.5
NME4-207ENST00000450036 SCRIBQ14160 1630 aa30.45■■■□□ 2.47
NME4-207ENST00000450036 SHROOM4Q9ULL8 1493 aa30.44■■■□□ 2.46
NME4-207ENST00000450036 EIF4G1Q04637 1599 aaKnown RBP29.94■■■□□ 2.38
NME4-207ENST00000450036 CC2D2AQ9P2K1 1620 aa29.91■■■□□ 2.38
NME4-207ENST00000450036 CECR2Q9BXF3 1484 aa29.82■■■□□ 2.36
NME4-207ENST00000450036 NCAPD3P42695 1498 aa29.11■■■□□ 2.25
NME4-207ENST00000450036 SMARCA4P51532 1647 aa29.09■■■□□ 2.25
NME4-207ENST00000450036 ATAD2BQ9ULI0 1458 aa29.05■■■□□ 2.24
NME4-207ENST00000450036 BAZ1AQ9NRL2 1556 aaPredicted RBP29.04■■■□□ 2.24
NME4-207ENST00000450036 SMARCA2P51531 1590 aa29.03■■■□□ 2.24
NME4-207ENST00000450036 HMGXB3Q12766 1538 aa28.94■■■□□ 2.22
NME4-207ENST00000450036 MROH2BQ7Z745 1585 aa28.92■■■□□ 2.22
NME4-207ENST00000450036 BAZ1BQ9UIG0 1483 aaKnown RBP28.83■■■□□ 2.21
NME4-207ENST00000450036 PEG3Q9GZU2 1588 aa28.81■■■□□ 2.2
NME4-207ENST00000450036 RSF1Q96T23 1441 aaPredicted RBP28.77■■■□□ 2.2
NME4-207ENST00000450036 WIZO95785 1651 aa28.7■■■□□ 2.18
NME4-207ENST00000450036 SUPT5HO00267 1087 aaKnown RBP28.65■■■□□ 2.18
NME4-207ENST00000450036 ERCC6Q03468 1493 aa28.64■■■□□ 2.17
NME4-207ENST00000450036 NESP48681 1621 aa28.5■■■□□ 2.15
NME4-207ENST00000450036 CUX2O14529 1486 aa28.47■■■□□ 2.15
NME4-207ENST00000450036 LAMC3Q9Y6N6 1575 aa28.42■■■□□ 2.14
NME4-207ENST00000450036 TOP2AP11388 1531 aaKnown RBP28.28■■■□□ 2.12
NME4-207ENST00000450036 PDS5BQ9NTI5 1447 aa28.28■■■□□ 2.12
NME4-207ENST00000450036 CADPSQ9ULU8 1353 aa28.25■■■□□ 2.11
NME4-207ENST00000450036 THOC2Q8NI27 1593 aaKnown RBP28.16■■■□□ 2.1
NME4-207ENST00000450036 KIF21AQ7Z4S6 1674 aa28.12■■■□□ 2.09
NME4-207ENST00000450036 DNAJC5Q9H3Z4 198 aa28.07■■■□□ 2.08
NME4-207ENST00000450036 CCDC88BA6NC98 1476 aa28.02■■■□□ 2.08
NME4-207ENST00000450036 CFTRP13569 1480 aa27.99■■■□□ 2.07
NME4-207ENST00000450036 MRC2Q9UBG0 1479 aa27.99■■■□□ 2.07
NME4-207ENST00000450036 CEP164Q9UPV0 1460 aa27.95■■■□□ 2.07
NME4-207ENST00000450036 FANCD2Q9BXW9 1451 aa27.93■■■□□ 2.06
NME4-207ENST00000450036 WDR62O43379 1518 aa27.89■■■□□ 2.06
NME4-207ENST00000450036 PRDM2Q13029 1718 aa27.66■■■□□ 2.02
NME4-207ENST00000450036 URB2Q14146 1524 aaKnown RBP27.64■■■□□ 2.02
NME4-207ENST00000450036 ABCC8Q09428 1581 aa27.44■■□□□ 1.98
NME4-207ENST00000450036 TOPBP1Q92547 1522 aa27.41■■□□□ 1.98
NME4-207ENST00000450036 IFT140Q96RY7 1462 aa27.38■■□□□ 1.97
NME4-207ENST00000450036 DNMBPQ6XZF7 1577 aa27.35■■□□□ 1.97
NME4-207ENST00000450036 ZNF608Q9ULD9 1512 aaPredicted RBP27.24■■□□□ 1.95
NME4-207ENST00000450036 OSCARQ8IYS5 282 aa27.23■■□□□ 1.95
NME4-207ENST00000450036 POLA1P09884 1462 aaPredicted RBP27.15■■□□□ 1.94
NME4-207ENST00000450036 EIF4G3O43432 1585 aaKnown RBP27.13■■□□□ 1.93
NME4-207ENST00000450036 TARBP1Q13395 1621 aaKnown RBP27.12■■□□□ 1.93
NME4-207ENST00000450036 CHIC1Q5VXU3 224 aa27.08■■□□□ 1.93
NME4-207ENST00000450036 WRNQ14191 1432 aaPredicted RBP eCLIP27.07■■□□□ 1.922e-6■■■□□ 15
NME4-207ENST00000450036 CUX1P39880 1505 aa27.07■■□□□ 1.92
NME4-207ENST00000450036 SYNJ1O43426 1573 aa27.06■■□□□ 1.92
NME4-207ENST00000450036 SOGA1O94964 1423 aa27.06■■□□□ 1.92
NME4-207ENST00000450036 AQRO60306 1485 aaKnown RBP eCLIP27.05■■□□□ 1.924e-7■■■□□ 18.2
NME4-207ENST00000450036 FGD5Q6ZNL6 1462 aa27.03■■□□□ 1.92
NME4-207ENST00000450036 RAD54L2Q9Y4B4 1467 aa27.02■■□□□ 1.92
NME4-207ENST00000450036 TRIM41Q8WV44 630 aa26.98■■□□□ 1.91
NME4-207ENST00000450036 BIVM-ERCC5R4GMW8 1640 aa26.97■■□□□ 1.91
NME4-207ENST00000450036 TOP2BQ02880 1626 aa26.96■■□□□ 1.91
NME4-207ENST00000450036 TDRD9Q8NDG6 1382 aaKnown RBP26.95■■□□□ 1.9
NME4-207ENST00000450036 WDR97A6NE52 1622 aa26.94■■□□□ 1.9
NME4-207ENST00000450036 FBLN2P98095 1184 aa26.87■■□□□ 1.89
NME4-207ENST00000450036 CHD1O14646 1710 aa26.82■■□□□ 1.88
NME4-207ENST00000450036 GRIN2BQ13224 1484 aa26.81■■□□□ 1.88
NME4-207ENST00000450036 SNAPC4Q5SXM2 1469 aa26.81■■□□□ 1.88
NME4-207ENST00000450036 MAGI1Q96QZ7 1491 aaPredicted RBP26.79■■□□□ 1.88
NME4-207ENST00000450036 RIMBP3CA6NJZ7 1639 aa26.76■■□□□ 1.87
NME4-207ENST00000450036 RIMBP3BA6NNM3 1639 aa26.76■■□□□ 1.87
NME4-207ENST00000450036 RIMBP3Q9UFD9 1639 aa26.76■■□□□ 1.87
NME4-207ENST00000450036 ABCA10Q8WWZ4 1543 aa26.76■■□□□ 1.87
NME4-207ENST00000450036 ARHGEF11O15085 1522 aa26.75■■□□□ 1.87
NME4-207ENST00000450036 GAPVD1Q14C86 1478 aa26.74■■□□□ 1.87
NME4-207ENST00000450036 CHMP7Q8WUX9 453 aaPredicted RBP26.73■■□□□ 1.87
NME4-207ENST00000450036 SYNJ2O15056 1496 aa26.68■■□□□ 1.86
NME4-207ENST00000450036 ABCA5Q8WWZ7 1642 aa26.65■■□□□ 1.86
NME4-207ENST00000450036 PBRM1Q86U86 1689 aa26.64■■□□□ 1.86
NME4-207ENST00000450036 RUSC2Q8N2Y8 1516 aa26.59■■□□□ 1.85
NME4-207ENST00000450036 CLASP1Q7Z460 1538 aa26.57■■□□□ 1.84
NME4-207ENST00000450036 CYB5RLQ6IPT4 315 aa26.54■■□□□ 1.84
NME4-207ENST00000450036 FAM9AQ8IZU1 332 aaPredicted RBP26.51■■□□□ 1.83
NME4-207ENST00000450036 ARAP1Q96P48 1450 aa26.49■■□□□ 1.83
NME4-207ENST00000450036 ADAMTS12P58397 1594 aa26.46■■□□□ 1.83
NME4-207ENST00000450036 ERICH3Q5RHP9 1530 aa26.44■■□□□ 1.82
NME4-207ENST00000450036 GRIN2AQ12879 1464 aa26.44■■□□□ 1.82
NME4-207ENST00000450036 FHAD1B1AJZ9 1412 aa26.43■■□□□ 1.82
NME4-207ENST00000450036 KIF27Q86VH2 1401 aa26.42■■□□□ 1.82
NME4-207ENST00000450036 NUP160Q12769 1436 aa26.34■■□□□ 1.81
NME4-207ENST00000450036 IGF1RP08069 1367 aa26.31■■□□□ 1.8
NME4-207ENST00000450036 CSRNP3Q8WYN3 585 aa26.29■■□□□ 1.8
NME4-207ENST00000450036 CEP170Q5SW79 1584 aa26.29■■□□□ 1.8
NME4-207ENST00000450036 EEA1Q15075 1411 aa26.28■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms