RNA–Protein interactions for RNA: ENST00000584968.5

SNRPN-210, Transcript of small nuclear ribonucleoprotein polypeptide N, humanhuman

TSL 5

Gene SNRPN, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPN-210ENST00000584968 NISCHQ9Y2I1 1504 aa36.78■■■■□ 3.48
SNRPN-210ENST00000584968 CCDC180Q9P1Z9 1646 aa33■■■□□ 2.87
SNRPN-210ENST00000584968 ABCC9O60706 1549 aa32.8■■■□□ 2.84
SNRPN-210ENST00000584968 RB1CC1Q8TDY2 1594 aa31.32■■■□□ 2.6
SNRPN-210ENST00000584968 NACADO15069 1562 aa31.14■■■□□ 2.58
SNRPN-210ENST00000584968 DCAF8L2P0C7V8 631 aa30.93■■■□□ 2.54
SNRPN-210ENST00000584968 MYO15BQ96JP2 1530 aa30.76■■■□□ 2.51
SNRPN-210ENST00000584968 UNC13AQ9UPW8 1703 aa30.64■■■□□ 2.5
SNRPN-210ENST00000584968 DNAJC5BQ9UF47 199 aa30.58■■■□□ 2.49
SNRPN-210ENST00000584968 ZCCHC6Q5VYS8 1495 aaKnown RBP30.52■■■□□ 2.48
SNRPN-210ENST00000584968 PABPN1Q86U42 306 aaKnown RBP eCLIP30.52■■■□□ 2.48
SNRPN-210ENST00000584968 DCAF1Q9Y4B6 1507 aa30.41■■■□□ 2.46
SNRPN-210ENST00000584968 BICRAQ9NZM4 1560 aa30.38■■■□□ 2.45
SNRPN-210ENST00000584968 SCRIBQ14160 1630 aa30.04■■■□□ 2.4
SNRPN-210ENST00000584968 SHROOM4Q9ULL8 1493 aa30.03■■■□□ 2.4
SNRPN-210ENST00000584968 CC2D2AQ9P2K1 1620 aa29.67■■■□□ 2.34
SNRPN-210ENST00000584968 EIF4G1Q04637 1599 aaKnown RBP29.64■■■□□ 2.33
SNRPN-210ENST00000584968 CECR2Q9BXF3 1484 aa29.54■■■□□ 2.32
SNRPN-210ENST00000584968 NCAPD3P42695 1498 aa28.72■■■□□ 2.19
SNRPN-210ENST00000584968 SMARCA4P51532 1647 aa28.69■■■□□ 2.18
SNRPN-210ENST00000584968 ATAD2BQ9ULI0 1458 aa28.66■■■□□ 2.18
SNRPN-210ENST00000584968 SMARCA2P51531 1590 aa28.61■■■□□ 2.17
SNRPN-210ENST00000584968 BAZ1AQ9NRL2 1556 aaPredicted RBP28.56■■■□□ 2.16
SNRPN-210ENST00000584968 HMGXB3Q12766 1538 aa28.54■■■□□ 2.16
SNRPN-210ENST00000584968 PEG3Q9GZU2 1588 aa28.41■■■□□ 2.14
SNRPN-210ENST00000584968 BAZ1BQ9UIG0 1483 aaKnown RBP28.4■■■□□ 2.14
SNRPN-210ENST00000584968 MROH2BQ7Z745 1585 aa28.33■■■□□ 2.13
SNRPN-210ENST00000584968 ERCC6Q03468 1493 aa28.33■■■□□ 2.13
SNRPN-210ENST00000584968 CUX2O14529 1486 aa28.24■■■□□ 2.11
SNRPN-210ENST00000584968 NESP48681 1621 aa28.21■■■□□ 2.11
SNRPN-210ENST00000584968 LAMC3Q9Y6N6 1575 aa28.08■■■□□ 2.09
SNRPN-210ENST00000584968 WIZO95785 1651 aa28.02■■■□□ 2.08
SNRPN-210ENST00000584968 DNAJC5Q9H3Z4 198 aa28.01■■■□□ 2.07
SNRPN-210ENST00000584968 THOC2Q8NI27 1593 aaKnown RBP27.94■■■□□ 2.06
SNRPN-210ENST00000584968 KIF21AQ7Z4S6 1674 aa27.9■■■□□ 2.06
SNRPN-210ENST00000584968 PDS5BQ9NTI5 1447 aa27.89■■■□□ 2.06
SNRPN-210ENST00000584968 CADPSQ9ULU8 1353 aa27.85■■■□□ 2.05
SNRPN-210ENST00000584968 RSF1Q96T23 1441 aaPredicted RBP27.78■■■□□ 2.04
SNRPN-210ENST00000584968 TOP2AP11388 1531 aaKnown RBP27.68■■■□□ 2.02
SNRPN-210ENST00000584968 MRC2Q9UBG0 1479 aa27.65■■■□□ 2.02
SNRPN-210ENST00000584968 WDR62O43379 1518 aa27.59■■■□□ 2.01
SNRPN-210ENST00000584968 CEP164Q9UPV0 1460 aa27.57■■■□□ 2
SNRPN-210ENST00000584968 CFTRP13569 1480 aa27.57■■■□□ 2
SNRPN-210ENST00000584968 FANCD2Q9BXW9 1451 aa27.54■■■□□ 2
SNRPN-210ENST00000584968 PRDM2Q13029 1718 aa27.39■■□□□ 1.98
SNRPN-210ENST00000584968 CCDC88BA6NC98 1476 aa27.33■■□□□ 1.97
SNRPN-210ENST00000584968 URB2Q14146 1524 aaKnown RBP27.3■■□□□ 1.96
SNRPN-210ENST00000584968 TOPBP1Q92547 1522 aa27.04■■□□□ 1.92
SNRPN-210ENST00000584968 ABCC8Q09428 1581 aa27.01■■□□□ 1.92
SNRPN-210ENST00000584968 IFT140Q96RY7 1462 aa27.01■■□□□ 1.91
SNRPN-210ENST00000584968 DNMBPQ6XZF7 1577 aa26.97■■□□□ 1.91
SNRPN-210ENST00000584968 OSCARQ8IYS5 282 aa26.93■■□□□ 1.9
SNRPN-210ENST00000584968 ZNF608Q9ULD9 1512 aaPredicted RBP26.93■■□□□ 1.9
SNRPN-210ENST00000584968 TRIM41Q8WV44 630 aa26.84■■□□□ 1.89
SNRPN-210ENST00000584968 EIF4G3O43432 1585 aaKnown RBP26.83■■□□□ 1.89
SNRPN-210ENST00000584968 TARBP1Q13395 1621 aaKnown RBP26.79■■□□□ 1.88
SNRPN-210ENST00000584968 POLA1P09884 1462 aaPredicted RBP26.77■■□□□ 1.88
SNRPN-210ENST00000584968 AQRO60306 1485 aaKnown RBP eCLIP26.69■■□□□ 1.861e-6■□□□□ 10.6
SNRPN-210ENST00000584968 RAD54L2Q9Y4B4 1467 aa26.65■■□□□ 1.86
SNRPN-210ENST00000584968 SOGA1O94964 1423 aa26.64■■□□□ 1.85
SNRPN-210ENST00000584968 SUPT5HO00267 1087 aaKnown RBP26.63■■□□□ 1.85
SNRPN-210ENST00000584968 FGD5Q6ZNL6 1462 aa26.62■■□□□ 1.85
SNRPN-210ENST00000584968 CHD1O14646 1710 aa26.62■■□□□ 1.85
SNRPN-210ENST00000584968 CUX1P39880 1505 aa26.62■■□□□ 1.85
SNRPN-210ENST00000584968 RIMBP3CA6NJZ7 1639 aa26.61■■□□□ 1.85
SNRPN-210ENST00000584968 RIMBP3BA6NNM3 1639 aa26.61■■□□□ 1.85
SNRPN-210ENST00000584968 RIMBP3Q9UFD9 1639 aa26.61■■□□□ 1.85
SNRPN-210ENST00000584968 WDR97A6NE52 1622 aa26.57■■□□□ 1.84
SNRPN-210ENST00000584968 TDRD9Q8NDG6 1382 aaKnown RBP26.55■■□□□ 1.84
SNRPN-210ENST00000584968 ARHGEF11O15085 1522 aa26.53■■□□□ 1.84
SNRPN-210ENST00000584968 FBLN2P98095 1184 aa26.49■■□□□ 1.83
SNRPN-210ENST00000584968 SNAPC4Q5SXM2 1469 aa26.45■■□□□ 1.82
SNRPN-210ENST00000584968 GRIN2BQ13224 1484 aa26.41■■□□□ 1.82
SNRPN-210ENST00000584968 MAGI1Q96QZ7 1491 aaPredicted RBP26.41■■□□□ 1.82
SNRPN-210ENST00000584968 PBRM1Q86U86 1689 aa26.36■■□□□ 1.81
SNRPN-210ENST00000584968 ABCA10Q8WWZ4 1543 aa26.34■■□□□ 1.81
SNRPN-210ENST00000584968 GAPVD1Q14C86 1478 aa26.33■■□□□ 1.81
SNRPN-210ENST00000584968 CHMP7Q8WUX9 453 aaPredicted RBP26.32■■□□□ 1.8
SNRPN-210ENST00000584968 SYNJ1O43426 1573 aa26.31■■□□□ 1.8
SNRPN-210ENST00000584968 ABCA5Q8WWZ7 1642 aa26.31■■□□□ 1.8
SNRPN-210ENST00000584968 SYNJ2O15056 1496 aa26.3■■□□□ 1.8
SNRPN-210ENST00000584968 CLASP1Q7Z460 1538 aa26.29■■□□□ 1.8
SNRPN-210ENST00000584968 CYB5RLQ6IPT4 315 aa26.29■■□□□ 1.8
SNRPN-210ENST00000584968 ARAP1Q96P48 1450 aa26.27■■□□□ 1.8
SNRPN-210ENST00000584968 BIVM-ERCC5R4GMW8 1640 aa26.27■■□□□ 1.8
SNRPN-210ENST00000584968 TOP2BQ02880 1626 aa26.25■■□□□ 1.79
SNRPN-210ENST00000584968 WRNQ14191 1432 aaPredicted RBP eCLIP26.24■■□□□ 1.79
SNRPN-210ENST00000584968 ADAMTS12P58397 1594 aa26.1■■□□□ 1.77
SNRPN-210ENST00000584968 GRIN2AQ12879 1464 aa26.07■■□□□ 1.76
SNRPN-210ENST00000584968 ERICH3Q5RHP9 1530 aa26.02■■□□□ 1.76
SNRPN-210ENST00000584968 FHAD1B1AJZ9 1412 aa26■■□□□ 1.75
SNRPN-210ENST00000584968 CEP170Q5SW79 1584 aa25.98■■□□□ 1.75
SNRPN-210ENST00000584968 NUP160Q12769 1436 aa25.97■■□□□ 1.75
SNRPN-210ENST00000584968 TRHP20396 242 aaPredicted RBP25.96■■□□□ 1.75
SNRPN-210ENST00000584968 ERCC6L2Q5T890 1561 aa25.87■■□□□ 1.73
SNRPN-210ENST00000584968 SHROOM2Q13796 1616 aa25.87■■□□□ 1.73
SNRPN-210ENST00000584968 KIF27Q86VH2 1401 aa25.73■■□□□ 1.71
SNRPN-210ENST00000584968 RUSC2Q8N2Y8 1516 aa25.73■■□□□ 1.71
SNRPN-210ENST00000584968 PRG4Q92954 1404 aaPredicted RBP25.7■■□□□ 1.7
SNRPN-210ENST00000584968 CUL7Q14999 1698 aa25.69■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms