RNA–Protein interactions for RNA: ENST00000635113.1

SPATA20-228, Transcript of spermatogenesis associated 20, humanhuman

TSL 1 (best)

Gene SPATA20, Length 1,706 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPATA20-228ENST00000635113 NISCHQ9Y2I1 1504 aa33.48■■■□□ 2.95
SPATA20-228ENST00000635113 CCDC180Q9P1Z9 1646 aa28.86■■■□□ 2.21
SPATA20-228ENST00000635113 ZCCHC6Q5VYS8 1495 aaKnown RBP28.25■■■□□ 2.11
SPATA20-228ENST00000635113 DCAF1Q9Y4B6 1507 aa27.75■■■□□ 2.03
SPATA20-228ENST00000635113 SHROOM4Q9ULL8 1493 aa27.72■■■□□ 2.03
SPATA20-228ENST00000635113 DCAF8L2P0C7V8 631 aa27.39■■□□□ 1.98
SPATA20-228ENST00000635113 MYO15BQ96JP2 1530 aa27.17■■□□□ 1.94
SPATA20-228ENST00000635113 SUPT5HO00267 1087 aaKnown RBP27.1■■□□□ 1.93
SPATA20-228ENST00000635113 NACADO15069 1562 aa26.75■■□□□ 1.87
SPATA20-228ENST00000635113 ABCC9O60706 1549 aa26.57■■□□□ 1.84
SPATA20-228ENST00000635113 SCRIBQ14160 1630 aa26.56■■□□□ 1.84
SPATA20-228ENST00000635113 CHIC1Q5VXU3 224 aa26.38■■□□□ 1.81
SPATA20-228ENST00000635113 RB1CC1Q8TDY2 1594 aa26.32■■□□□ 1.8
SPATA20-228ENST00000635113 RSF1Q96T23 1441 aaPredicted RBP26.25■■□□□ 1.79
SPATA20-228ENST00000635113 CECR2Q9BXF3 1484 aa25.89■■□□□ 1.73
SPATA20-228ENST00000635113 MROH2BQ7Z745 1585 aa25.84■■□□□ 1.73
SPATA20-228ENST00000635113 BAZ1AQ9NRL2 1556 aaPredicted RBP25.81■■□□□ 1.72
SPATA20-228ENST00000635113 UNC13AQ9UPW8 1703 aa25.71■■□□□ 1.71
SPATA20-228ENST00000635113 WIZO95785 1651 aa25.66■■□□□ 1.7
SPATA20-228ENST00000635113 SMARCA4P51532 1647 aa25.55■■□□□ 1.68
SPATA20-228ENST00000635113 TRIM41Q8WV44 630 aa25.51■■□□□ 1.67
SPATA20-228ENST00000635113 TOP2AP11388 1531 aaKnown RBP25.47■■□□□ 1.67
SPATA20-228ENST00000635113 BICRAQ9NZM4 1560 aa25.44■■□□□ 1.66
SPATA20-228ENST00000635113 LOC105371045A0A1W2PR82 267 aa25.34■■□□□ 1.65
SPATA20-228ENST00000635113 EIF4G1Q04637 1599 aaKnown RBP25.27■■□□□ 1.64
SPATA20-228ENST00000635113 PEG3Q9GZU2 1588 aa25.26■■□□□ 1.63
SPATA20-228ENST00000635113 SMARCA2P51531 1590 aa25.22■■□□□ 1.63
SPATA20-228ENST00000635113 PABPN1Q86U42 306 aaKnown RBP eCLIP25.21■■□□□ 1.63
SPATA20-228ENST00000635113 CCDC88BA6NC98 1476 aa25.21■■□□□ 1.63
SPATA20-228ENST00000635113 PCGF6Q9BYE7 350 aa24.99■■□□□ 1.59
SPATA20-228ENST00000635113 ATAD2BQ9ULI0 1458 aa24.98■■□□□ 1.59
SPATA20-228ENST00000635113 FAM9AQ8IZU1 332 aaPredicted RBP24.96■■□□□ 1.59
SPATA20-228ENST00000635113 HRCP23327 699 aa24.92■■□□□ 1.58
SPATA20-228ENST00000635113 TRIM26Q12899 539 aaPredicted RBP24.9■■□□□ 1.58
SPATA20-228ENST00000635113 BAZ1BQ9UIG0 1483 aaKnown RBP24.88■■□□□ 1.57
SPATA20-228ENST00000635113 ABCC8Q09428 1581 aa24.84■■□□□ 1.57
SPATA20-228ENST00000635113 EEA1Q15075 1411 aa24.83■■□□□ 1.56
SPATA20-228ENST00000635113 WRNQ14191 1432 aaPredicted RBP eCLIP24.69■■□□□ 1.54
SPATA20-228ENST00000635113 HMGXB3Q12766 1538 aa24.69■■□□□ 1.54
SPATA20-228ENST00000635113 NCAPD3P42695 1498 aa24.68■■□□□ 1.54
SPATA20-228ENST00000635113 CSRNP3Q8WYN3 585 aa24.58■■□□□ 1.52
SPATA20-228ENST00000635113 SOGA1O94964 1423 aa24.57■■□□□ 1.52
SPATA20-228ENST00000635113 TNIKQ9UKE5 1360 aa24.54■■□□□ 1.52
SPATA20-228ENST00000635113 EHMT2Q96KQ7 1210 aa24.5■■□□□ 1.51
SPATA20-228ENST00000635113 SYNJ1O43426 1573 aa24.49■■□□□ 1.51
SPATA20-228ENST00000635113 GOLGA3Q08378 1498 aa24.44■■□□□ 1.5
SPATA20-228ENST00000635113 TOP2BQ02880 1626 aa24.4■■□□□ 1.5
SPATA20-228ENST00000635113 RUSC2Q8N2Y8 1516 aa24.4■■□□□ 1.5
SPATA20-228ENST00000635113 ZEB1P37275 1124 aaPredicted RBP24.4■■□□□ 1.5
SPATA20-228ENST00000635113 CEP162Q5TB80 1403 aa24.39■■□□□ 1.49
SPATA20-228ENST00000635113 KIF21BO75037 1637 aa24.37■■□□□ 1.49
SPATA20-228ENST00000635113 CEP164Q9UPV0 1460 aa24.37■■□□□ 1.49
SPATA20-228ENST00000635113 BIVM-ERCC5R4GMW8 1640 aa24.35■■□□□ 1.49
SPATA20-228ENST00000635113 CFTRP13569 1480 aa24.32■■□□□ 1.48
SPATA20-228ENST00000635113 UBTFP17480 764 aaKnown RBP24.3■■□□□ 1.48
SPATA20-228ENST00000635113 PRDM2Q13029 1718 aa24.2■■□□□ 1.46
SPATA20-228ENST00000635113 CUX1P39880 1505 aa24.12■■□□□ 1.45
SPATA20-228ENST00000635113 ERICH3Q5RHP9 1530 aa24.1■■□□□ 1.45
SPATA20-228ENST00000635113 CADPSQ9ULU8 1353 aa24.1■■□□□ 1.45
SPATA20-228ENST00000635113 CC2D2AQ9P2K1 1620 aa24.08■■□□□ 1.45
SPATA20-228ENST00000635113 PPARGC1BQ86YN6 1023 aaKnown RBP24.07■■□□□ 1.44
SPATA20-228ENST00000635113 CLIP1P30622 1438 aa24.06■■□□□ 1.44
SPATA20-228ENST00000635113 KIF27Q86VH2 1401 aa24.05■■□□□ 1.44
SPATA20-228ENST00000635113 PRXQ9BXM0 1461 aa24.04■■□□□ 1.44
SPATA20-228ENST00000635113 RAPGEF2Q9Y4G8 1499 aa24.04■■□□□ 1.44
SPATA20-228ENST00000635113 VPS8Q8N3P4 1428 aa23.97■■□□□ 1.43
SPATA20-228ENST00000635113 APLP2Q06481 763 aa23.84■■□□□ 1.41
SPATA20-228ENST00000635113 FANCD2Q9BXW9 1451 aa23.79■■□□□ 1.4
SPATA20-228ENST00000635113 CUX2O14529 1486 aa23.76■■□□□ 1.39
SPATA20-228ENST00000635113 CCER1Q8TC90 406 aaPredicted RBP23.76■■□□□ 1.39
SPATA20-228ENST00000635113 FGD5Q6ZNL6 1462 aa23.75■■□□□ 1.39
SPATA20-228ENST00000635113 IGF1RP08069 1367 aa23.74■■□□□ 1.39
SPATA20-228ENST00000635113 DNMBPQ6XZF7 1577 aa23.72■■□□□ 1.39
SPATA20-228ENST00000635113 LAMC3Q9Y6N6 1575 aa23.71■■□□□ 1.39
SPATA20-228ENST00000635113 ARAP1Q96P48 1450 aa23.68■■□□□ 1.38
SPATA20-228ENST00000635113 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.67■■□□□ 1.38
SPATA20-228ENST00000635113 TTBK1Q5TCY1 1321 aaPredicted RBP23.66■■□□□ 1.38
SPATA20-228ENST00000635113 CARMIL1Q5VZK9 1371 aa23.64■■□□□ 1.37
SPATA20-228ENST00000635113 ABCA10Q8WWZ4 1543 aa23.61■■□□□ 1.37
SPATA20-228ENST00000635113 TOPBP1Q92547 1522 aa23.61■■□□□ 1.37
SPATA20-228ENST00000635113 RANGAP1P46060 587 aaPredicted RBP23.56■■□□□ 1.36
SPATA20-228ENST00000635113 ARHGAP35Q9NRY4 1499 aa23.56■■□□□ 1.36
SPATA20-228ENST00000635113 PDS5BQ9NTI5 1447 aa23.54■■□□□ 1.36
SPATA20-228ENST00000635113 POLA1P09884 1462 aaPredicted RBP23.54■■□□□ 1.36
SPATA20-228ENST00000635113 NESP48681 1621 aa23.53■■□□□ 1.36
SPATA20-228ENST00000635113 MAP3K1Q13233 1512 aa23.49■■□□□ 1.35
SPATA20-228ENST00000635113 CUL7Q14999 1698 aa23.48■■□□□ 1.35
SPATA20-228ENST00000635113 RAD54L2Q9Y4B4 1467 aa23.44■■□□□ 1.34
SPATA20-228ENST00000635113 URB2Q14146 1524 aaKnown RBP23.42■■□□□ 1.34
SPATA20-228ENST00000635113 FHAD1B1AJZ9 1412 aa23.4■■□□□ 1.34
SPATA20-228ENST00000635113 WDR97A6NE52 1622 aa23.39■■□□□ 1.34
SPATA20-228ENST00000635113 HNRNPUL2Q1KMD3 747 aaKnown RBP23.39■■□□□ 1.34
SPATA20-228ENST00000635113 RRBP1Q9P2E9 1410 aaKnown RBP23.38■■□□□ 1.33
SPATA20-228ENST00000635113 EFCAB5A4FU69 1503 aa23.36■■□□□ 1.33
SPATA20-228ENST00000635113 KANK4Q5T7N3 995 aaPredicted RBP23.36■■□□□ 1.33
SPATA20-228ENST00000635113 CLSPNQ9HAW4 1339 aa23.32■■□□□ 1.32
SPATA20-228ENST00000635113 ABCA5Q8WWZ7 1642 aa23.31■■□□□ 1.32
SPATA20-228ENST00000635113 TIAM1Q13009 1591 aa23.31■■□□□ 1.32
SPATA20-228ENST00000635113 CTTNBP2Q8WZ74 1663 aa23.28■■□□□ 1.32
SPATA20-228ENST00000635113 AQRO60306 1485 aaKnown RBP eCLIP23.26■■□□□ 1.317e-8■■■□□ 18.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms