Protein–RNA interactions for Protein: Q9Y6A9

SPCS1, Signal peptidase complex subunit 1, humanhuman

Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1Q9Y6A9 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SPCS1Q9Y6A9 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SPCS1Q9Y6A9 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SPCS1Q9Y6A9 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
SPCS1Q9Y6A9 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SPCS1Q9Y6A9 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SPCS1Q9Y6A9 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SPCS1Q9Y6A9 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SPCS1Q9Y6A9 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SPCS1Q9Y6A9 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SPCS1Q9Y6A9 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC17.1■□□□□ 0.33
SPCS1Q9Y6A9 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC17.1■□□□□ 0.33
SPCS1Q9Y6A9 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
SPCS1Q9Y6A9 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SPCS1Q9Y6A9 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SPCS1Q9Y6A9 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC17.09■□□□□ 0.33
SPCS1Q9Y6A9 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SPCS1Q9Y6A9 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
SPCS1Q9Y6A9 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SPCS1Q9Y6A9 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SPCS1Q9Y6A9 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SPCS1Q9Y6A9 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC17.09■□□□□ 0.33
SPCS1Q9Y6A9 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SPCS1Q9Y6A9 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SPCS1Q9Y6A9 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SPCS1Q9Y6A9 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC17.08■□□□□ 0.33
SPCS1Q9Y6A9 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SPCS1Q9Y6A9 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SPCS1Q9Y6A9 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SPCS1Q9Y6A9 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SPCS1Q9Y6A9 AL024507.2-201ENST00000606070 2574 ntBASIC17.08■□□□□ 0.32
SPCS1Q9Y6A9 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SPCS1Q9Y6A9 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SPCS1Q9Y6A9 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SPCS1Q9Y6A9 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SPCS1Q9Y6A9 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC17.07■□□□□ 0.32
SPCS1Q9Y6A9 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC17.07■□□□□ 0.32
SPCS1Q9Y6A9 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SPCS1Q9Y6A9 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
SPCS1Q9Y6A9 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SPCS1Q9Y6A9 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SPCS1Q9Y6A9 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
SPCS1Q9Y6A9 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC17.05■□□□□ 0.32
SPCS1Q9Y6A9 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SPCS1Q9Y6A9 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SPCS1Q9Y6A9 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SPCS1Q9Y6A9 CASK-201ENST00000378154 2494 ntTSL 5 BASIC17.05■□□□□ 0.32
SPCS1Q9Y6A9 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC17.04■□□□□ 0.32
SPCS1Q9Y6A9 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SPCS1Q9Y6A9 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SPCS1Q9Y6A9 ERN1-208ENST00000606895 2068 ntBASIC17.04■□□□□ 0.32
SPCS1Q9Y6A9 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC17.04■□□□□ 0.32
SPCS1Q9Y6A9 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SPCS1Q9Y6A9 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SPCS1Q9Y6A9 CEBPA-AS1-201ENST00000592982 2198 ntBASIC17.04■□□□□ 0.32
SPCS1Q9Y6A9 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
SPCS1Q9Y6A9 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SPCS1Q9Y6A9 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SPCS1Q9Y6A9 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SPCS1Q9Y6A9 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SPCS1Q9Y6A9 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC17.03■□□□□ 0.32
SPCS1Q9Y6A9 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SPCS1Q9Y6A9 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SPCS1Q9Y6A9 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SPCS1Q9Y6A9 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SPCS1Q9Y6A9 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC17.02■□□□□ 0.32
SPCS1Q9Y6A9 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SPCS1Q9Y6A9 LINC01003-201ENST00000564834 1764 ntBASIC17.02■□□□□ 0.31
SPCS1Q9Y6A9 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SPCS1Q9Y6A9 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
SPCS1Q9Y6A9 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SPCS1Q9Y6A9 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SPCS1Q9Y6A9 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SPCS1Q9Y6A9 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
SPCS1Q9Y6A9 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC17■□□□□ 0.31
SPCS1Q9Y6A9 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC17■□□□□ 0.31
SPCS1Q9Y6A9 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
SPCS1Q9Y6A9 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
SPCS1Q9Y6A9 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SPCS1Q9Y6A9 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SPCS1Q9Y6A9 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC17■□□□□ 0.31
SPCS1Q9Y6A9 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC17■□□□□ 0.31
SPCS1Q9Y6A9 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SPCS1Q9Y6A9 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SPCS1Q9Y6A9 PROC-203ENST00000409048 1586 ntTSL 5 BASIC16.99■□□□□ 0.31
SPCS1Q9Y6A9 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SPCS1Q9Y6A9 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
SPCS1Q9Y6A9 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
SPCS1Q9Y6A9 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SPCS1Q9Y6A9 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SPCS1Q9Y6A9 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SPCS1Q9Y6A9 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SPCS1Q9Y6A9 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SPCS1Q9Y6A9 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SPCS1Q9Y6A9 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SPCS1Q9Y6A9 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SPCS1Q9Y6A9 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
SPCS1Q9Y6A9 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
SPCS1Q9Y6A9 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
SPCS1Q9Y6A9 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms