Protein–RNA interactions for Protein: Q9H6Z4

RANBP3, Ran-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3Q9H6Z4 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RANBP3Q9H6Z4 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RANBP3Q9H6Z4 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
RANBP3Q9H6Z4 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.24■□□□□ 0.99
RANBP3Q9H6Z4 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC21.24■□□□□ 0.99
RANBP3Q9H6Z4 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RANBP3Q9H6Z4 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
RANBP3Q9H6Z4 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RANBP3Q9H6Z4 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
RANBP3Q9H6Z4 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC21.23■□□□□ 0.99
RANBP3Q9H6Z4 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RANBP3Q9H6Z4 MIR7108-201ENST00000614319 87 ntBASIC21.23■□□□□ 0.99
RANBP3Q9H6Z4 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RANBP3Q9H6Z4 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
RANBP3Q9H6Z4 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RANBP3Q9H6Z4 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RANBP3Q9H6Z4 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RANBP3Q9H6Z4 AC012676.1-201ENST00000574705 1949 ntBASIC21.22■□□□□ 0.99
RANBP3Q9H6Z4 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
RANBP3Q9H6Z4 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
RANBP3Q9H6Z4 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
RANBP3Q9H6Z4 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
RANBP3Q9H6Z4 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RANBP3Q9H6Z4 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RANBP3Q9H6Z4 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RANBP3Q9H6Z4 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
RANBP3Q9H6Z4 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RANBP3Q9H6Z4 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RANBP3Q9H6Z4 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.21■□□□□ 0.99
RANBP3Q9H6Z4 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RANBP3Q9H6Z4 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC21.21■□□□□ 0.99
RANBP3Q9H6Z4 AC133561.1-201ENST00000568600 2415 ntBASIC21.2■□□□□ 0.99
RANBP3Q9H6Z4 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.2■□□□□ 0.98
RANBP3Q9H6Z4 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC21.2■□□□□ 0.98
RANBP3Q9H6Z4 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.2■□□□□ 0.98
RANBP3Q9H6Z4 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RANBP3Q9H6Z4 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
RANBP3Q9H6Z4 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
RANBP3Q9H6Z4 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RANBP3Q9H6Z4 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RANBP3Q9H6Z4 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RANBP3Q9H6Z4 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RANBP3Q9H6Z4 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
RANBP3Q9H6Z4 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RANBP3Q9H6Z4 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RANBP3Q9H6Z4 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RANBP3Q9H6Z4 AC108673.1-201ENST00000510422 1159 ntBASIC21.18■□□□□ 0.98
RANBP3Q9H6Z4 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RANBP3Q9H6Z4 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
RANBP3Q9H6Z4 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.18■□□□□ 0.98
RANBP3Q9H6Z4 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RANBP3Q9H6Z4 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RANBP3Q9H6Z4 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RANBP3Q9H6Z4 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
RANBP3Q9H6Z4 DUSP8P4-201ENST00000399538 1761 ntBASIC21.17■□□□□ 0.98
RANBP3Q9H6Z4 LINC00543-201ENST00000567234 1845 ntBASIC21.17■□□□□ 0.98
RANBP3Q9H6Z4 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RANBP3Q9H6Z4 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
RANBP3Q9H6Z4 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RANBP3Q9H6Z4 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RANBP3Q9H6Z4 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
RANBP3Q9H6Z4 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RANBP3Q9H6Z4 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RANBP3Q9H6Z4 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RANBP3Q9H6Z4 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RANBP3Q9H6Z4 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC21.15■□□□□ 0.98
RANBP3Q9H6Z4 DUX4L29-201ENST00000425409 679 ntBASIC21.15■□□□□ 0.98
RANBP3Q9H6Z4 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC21.15■□□□□ 0.98
RANBP3Q9H6Z4 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
RANBP3Q9H6Z4 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
RANBP3Q9H6Z4 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RANBP3Q9H6Z4 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
RANBP3Q9H6Z4 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.14■□□□□ 0.97
RANBP3Q9H6Z4 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC21.14■□□□□ 0.97
RANBP3Q9H6Z4 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.14■□□□□ 0.97
RANBP3Q9H6Z4 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.13■□□□□ 0.97
RANBP3Q9H6Z4 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RANBP3Q9H6Z4 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RANBP3Q9H6Z4 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
RANBP3Q9H6Z4 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.13■□□□□ 0.97
RANBP3Q9H6Z4 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RANBP3Q9H6Z4 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RANBP3Q9H6Z4 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RANBP3Q9H6Z4 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC21.13■□□□□ 0.97
RANBP3Q9H6Z4 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RANBP3Q9H6Z4 HGH1-207ENST00000628266 258 ntTSL 5 BASIC21.13■□□□□ 0.97
RANBP3Q9H6Z4 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC21.13■□□□□ 0.97
RANBP3Q9H6Z4 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
RANBP3Q9H6Z4 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
RANBP3Q9H6Z4 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RANBP3Q9H6Z4 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
RANBP3Q9H6Z4 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RANBP3Q9H6Z4 ZNRF2P2-203ENST00000454624 420 ntBASIC21.12■□□□□ 0.97
RANBP3Q9H6Z4 CIB2-204ENST00000557846 934 ntTSL 3 BASIC21.12■□□□□ 0.97
RANBP3Q9H6Z4 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RANBP3Q9H6Z4 AC010864.1-201ENST00000609407 1511 ntBASIC21.12■□□□□ 0.97
RANBP3Q9H6Z4 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RANBP3Q9H6Z4 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
RANBP3Q9H6Z4 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RANBP3Q9H6Z4 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms