Protein–RNA interactions for Protein: Q9H251

CDH23, Cadherin-23, humanhuman

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23Q9H251 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC26.92■■□□□ 1.9
CDH23Q9H251 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
CDH23Q9H251 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
CDH23Q9H251 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC26.92■■□□□ 1.9
CDH23Q9H251 AC074183.2-201ENST00000623112 922 ntBASIC26.92■■□□□ 1.9
CDH23Q9H251 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
CDH23Q9H251 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC26.92■■□□□ 1.9
CDH23Q9H251 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC26.91■■□□□ 1.9
CDH23Q9H251 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC26.91■■□□□ 1.9
CDH23Q9H251 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC26.91■■□□□ 1.9
CDH23Q9H251 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC26.91■■□□□ 1.9
CDH23Q9H251 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC26.9■■□□□ 1.9
CDH23Q9H251 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CDH23Q9H251 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CDH23Q9H251 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC26.9■■□□□ 1.9
CDH23Q9H251 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC26.89■■□□□ 1.9
CDH23Q9H251 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
CDH23Q9H251 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.9
CDH23Q9H251 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC26.89■■□□□ 1.89
CDH23Q9H251 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC26.88■■□□□ 1.89
CDH23Q9H251 AL359258.2-201ENST00000564063 1566 ntBASIC26.88■■□□□ 1.89
CDH23Q9H251 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC26.88■■□□□ 1.89
CDH23Q9H251 AC100797.4-201ENST00000631653 1827 ntBASIC26.88■■□□□ 1.89
CDH23Q9H251 IDNK-201ENST00000376417 511 ntTSL 5 BASIC26.88■■□□□ 1.89
CDH23Q9H251 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CDH23Q9H251 Z92544.1-202ENST00000571933 1220 ntBASIC26.88■■□□□ 1.89
CDH23Q9H251 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC26.87■■□□□ 1.89
CDH23Q9H251 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CDH23Q9H251 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CDH23Q9H251 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC26.87■■□□□ 1.89
CDH23Q9H251 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC26.87■■□□□ 1.89
CDH23Q9H251 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CDH23Q9H251 RALB-208ENST00000631312 311 ntTSL 5 BASIC26.86■■□□□ 1.89
CDH23Q9H251 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC26.86■■□□□ 1.89
CDH23Q9H251 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC26.86■■□□□ 1.89
CDH23Q9H251 AC093536.1-201ENST00000569153 554 ntBASIC26.86■■□□□ 1.89
CDH23Q9H251 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
CDH23Q9H251 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC26.85■■□□□ 1.89
CDH23Q9H251 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CDH23Q9H251 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC26.85■■□□□ 1.89
CDH23Q9H251 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
CDH23Q9H251 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC26.84■■□□□ 1.89
CDH23Q9H251 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC26.84■■□□□ 1.89
CDH23Q9H251 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC26.83■■□□□ 1.89
CDH23Q9H251 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC26.83■■□□□ 1.89
CDH23Q9H251 RNF146-205ENST00000477776 762 ntTSL 3 BASIC26.83■■□□□ 1.89
CDH23Q9H251 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC26.83■■□□□ 1.89
CDH23Q9H251 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC26.83■■□□□ 1.88
CDH23Q9H251 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC26.82■■□□□ 1.88
CDH23Q9H251 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CDH23Q9H251 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC26.82■■□□□ 1.88
CDH23Q9H251 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CDH23Q9H251 HYI-210ENST00000486909 905 ntTSL 5 BASIC26.82■■□□□ 1.88
CDH23Q9H251 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC26.81■■□□□ 1.88
CDH23Q9H251 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CDH23Q9H251 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC26.8■■□□□ 1.88
CDH23Q9H251 GRAMD4P7-201ENST00000578182 1232 ntBASIC26.8■■□□□ 1.88
CDH23Q9H251 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC26.8■■□□□ 1.88
CDH23Q9H251 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
CDH23Q9H251 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC26.79■■□□□ 1.88
CDH23Q9H251 IDNK-203ENST00000405990 629 ntTSL 2 BASIC26.79■■□□□ 1.88
CDH23Q9H251 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC26.79■■□□□ 1.88
CDH23Q9H251 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
CDH23Q9H251 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
CDH23Q9H251 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
CDH23Q9H251 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC26.78■■□□□ 1.88
CDH23Q9H251 AL135925.1-201ENST00000605920 1701 ntBASIC26.77■■□□□ 1.88
CDH23Q9H251 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC26.77■■□□□ 1.88
CDH23Q9H251 MEST-211ENST00000437945 1455 ntTSL 5 BASIC26.76■■□□□ 1.87
CDH23Q9H251 CREM-229ENST00000474362 1030 ntTSL 2 BASIC26.76■■□□□ 1.87
CDH23Q9H251 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC26.75■■□□□ 1.87
CDH23Q9H251 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
CDH23Q9H251 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC26.75■■□□□ 1.87
CDH23Q9H251 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
CDH23Q9H251 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC26.74■■□□□ 1.87
CDH23Q9H251 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
CDH23Q9H251 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC26.74■■□□□ 1.87
CDH23Q9H251 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
CDH23Q9H251 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC26.74■■□□□ 1.87
CDH23Q9H251 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
CDH23Q9H251 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC26.73■■□□□ 1.87
CDH23Q9H251 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC26.72■■□□□ 1.87
CDH23Q9H251 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC26.72■■□□□ 1.87
CDH23Q9H251 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
CDH23Q9H251 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC26.72■■□□□ 1.87
CDH23Q9H251 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC26.72■■□□□ 1.87
CDH23Q9H251 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC26.72■■□□□ 1.87
CDH23Q9H251 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC26.72■■□□□ 1.87
CDH23Q9H251 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC26.71■■□□□ 1.87
CDH23Q9H251 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
CDH23Q9H251 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC26.71■■□□□ 1.87
CDH23Q9H251 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC26.71■■□□□ 1.87
CDH23Q9H251 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC26.71■■□□□ 1.87
CDH23Q9H251 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
CDH23Q9H251 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC26.69■■□□□ 1.86
CDH23Q9H251 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC26.69■■□□□ 1.86
CDH23Q9H251 AL139246.5-201ENST00000606645 996 ntBASIC26.69■■□□□ 1.86
CDH23Q9H251 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC26.68■■□□□ 1.86
CDH23Q9H251 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
CDH23Q9H251 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms