Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 CALM3-209ENST00000597743 577 ntTSL 4 BASIC21.41■■□□□ 1.02
LRRTM1Q86UE6 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.41■■□□□ 1.02
LRRTM1Q86UE6 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
LRRTM1Q86UE6 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
LRRTM1Q86UE6 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
LRRTM1Q86UE6 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LRRTM1Q86UE6 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.4■■□□□ 1.02
LRRTM1Q86UE6 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC21.4■■□□□ 1.02
LRRTM1Q86UE6 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.4■■□□□ 1.02
LRRTM1Q86UE6 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
LRRTM1Q86UE6 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
LRRTM1Q86UE6 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LRRTM1Q86UE6 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
LRRTM1Q86UE6 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
LRRTM1Q86UE6 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
LRRTM1Q86UE6 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
LRRTM1Q86UE6 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
LRRTM1Q86UE6 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
LRRTM1Q86UE6 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
LRRTM1Q86UE6 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
LRRTM1Q86UE6 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
LRRTM1Q86UE6 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
LRRTM1Q86UE6 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
LRRTM1Q86UE6 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
LRRTM1Q86UE6 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
LRRTM1Q86UE6 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
LRRTM1Q86UE6 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
LRRTM1Q86UE6 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
LRRTM1Q86UE6 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LRRTM1Q86UE6 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
LRRTM1Q86UE6 PEX7-203ENST00000541292 945 ntTSL 5 BASIC21.36■■□□□ 1.01
LRRTM1Q86UE6 DUX4L28-201ENST00000623687 678 ntBASIC21.36■■□□□ 1.01
LRRTM1Q86UE6 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC21.36■■□□□ 1.01
LRRTM1Q86UE6 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC21.36■■□□□ 1.01
LRRTM1Q86UE6 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.36■■□□□ 1.01
LRRTM1Q86UE6 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.36■■□□□ 1.01
LRRTM1Q86UE6 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
LRRTM1Q86UE6 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
LRRTM1Q86UE6 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
LRRTM1Q86UE6 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.35■■□□□ 1.01
LRRTM1Q86UE6 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.35■■□□□ 1.01
LRRTM1Q86UE6 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
LRRTM1Q86UE6 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
LRRTM1Q86UE6 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC21.35■■□□□ 1.01
LRRTM1Q86UE6 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
LRRTM1Q86UE6 WHAMMP3-201ENST00000611636 1609 ntBASIC21.34■■□□□ 1.01
LRRTM1Q86UE6 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
LRRTM1Q86UE6 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC21.34■■□□□ 1.01
LRRTM1Q86UE6 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
LRRTM1Q86UE6 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
LRRTM1Q86UE6 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
LRRTM1Q86UE6 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
LRRTM1Q86UE6 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
LRRTM1Q86UE6 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC21.33■■□□□ 1.01
LRRTM1Q86UE6 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
LRRTM1Q86UE6 AC110285.7-201ENST00000624417 1536 ntBASIC21.33■■□□□ 1
LRRTM1Q86UE6 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC21.33■■□□□ 1
LRRTM1Q86UE6 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC21.32■■□□□ 1
LRRTM1Q86UE6 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC21.32■■□□□ 1
LRRTM1Q86UE6 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.32■■□□□ 1
LRRTM1Q86UE6 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC21.32■■□□□ 1
LRRTM1Q86UE6 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
LRRTM1Q86UE6 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LRRTM1Q86UE6 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LRRTM1Q86UE6 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
LRRTM1Q86UE6 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
LRRTM1Q86UE6 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.3■■□□□ 1
LRRTM1Q86UE6 ERN1-208ENST00000606895 2068 ntBASIC21.3■■□□□ 1
LRRTM1Q86UE6 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LRRTM1Q86UE6 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.3■■□□□ 1
LRRTM1Q86UE6 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.29■■□□□ 1
LRRTM1Q86UE6 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.29■■□□□ 1
LRRTM1Q86UE6 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LRRTM1Q86UE6 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC21.29■■□□□ 1
LRRTM1Q86UE6 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC21.29■■□□□ 1
LRRTM1Q86UE6 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC21.29■■□□□ 1
LRRTM1Q86UE6 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.29■■□□□ 1
LRRTM1Q86UE6 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC21.29■■□□□ 1
LRRTM1Q86UE6 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC21.29■■□□□ 1
LRRTM1Q86UE6 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC21.28■■□□□ 1
LRRTM1Q86UE6 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LRRTM1Q86UE6 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
LRRTM1Q86UE6 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC21.27■■□□□ 1
LRRTM1Q86UE6 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
LRRTM1Q86UE6 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LRRTM1Q86UE6 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
LRRTM1Q86UE6 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.27■□□□□ 0.99
LRRTM1Q86UE6 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
LRRTM1Q86UE6 AC010501.1-201ENST00000606270 1962 ntBASIC21.27■□□□□ 0.99
LRRTM1Q86UE6 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
LRRTM1Q86UE6 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LRRTM1Q86UE6 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
LRRTM1Q86UE6 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LRRTM1Q86UE6 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
LRRTM1Q86UE6 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC21.26■□□□□ 0.99
LRRTM1Q86UE6 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LRRTM1Q86UE6 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC21.25■□□□□ 0.99
LRRTM1Q86UE6 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
LRRTM1Q86UE6 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC21.25■□□□□ 0.99
LRRTM1Q86UE6 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms