Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
FAM78BQ5VT40 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FAM78BQ5VT40 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC19.42■□□□□ 0.7
FAM78BQ5VT40 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FAM78BQ5VT40 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC19.42■□□□□ 0.7
FAM78BQ5VT40 HNRNPLP2-201ENST00000568980 1570 ntBASIC19.42■□□□□ 0.7
FAM78BQ5VT40 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FAM78BQ5VT40 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
FAM78BQ5VT40 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FAM78BQ5VT40 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
FAM78BQ5VT40 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
FAM78BQ5VT40 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
FAM78BQ5VT40 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
FAM78BQ5VT40 RPS2-209ENST00000529806 993 ntTSL 3 BASIC19.41■□□□□ 0.7
FAM78BQ5VT40 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
FAM78BQ5VT40 AC092803.2-201ENST00000564287 1899 ntBASIC19.41■□□□□ 0.7
FAM78BQ5VT40 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
FAM78BQ5VT40 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FAM78BQ5VT40 DUSP8P4-201ENST00000399538 1761 ntBASIC19.4■□□□□ 0.7
FAM78BQ5VT40 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
FAM78BQ5VT40 AC005559.1-201ENST00000589661 871 ntBASIC19.4■□□□□ 0.7
FAM78BQ5VT40 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC19.4■□□□□ 0.7
FAM78BQ5VT40 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
FAM78BQ5VT40 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.7
FAM78BQ5VT40 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
FAM78BQ5VT40 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
FAM78BQ5VT40 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC19.39■□□□□ 0.69
FAM78BQ5VT40 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
FAM78BQ5VT40 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
FAM78BQ5VT40 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
FAM78BQ5VT40 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
FAM78BQ5VT40 WHAMMP2-203ENST00000563942 1603 ntBASIC19.38■□□□□ 0.69
FAM78BQ5VT40 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
FAM78BQ5VT40 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
FAM78BQ5VT40 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
FAM78BQ5VT40 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC19.37■□□□□ 0.69
FAM78BQ5VT40 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
FAM78BQ5VT40 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
FAM78BQ5VT40 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC19.37■□□□□ 0.69
FAM78BQ5VT40 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.37■□□□□ 0.69
FAM78BQ5VT40 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC19.37■□□□□ 0.69
FAM78BQ5VT40 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
FAM78BQ5VT40 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
FAM78BQ5VT40 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
FAM78BQ5VT40 AP004609.3-201ENST00000610705 1884 ntBASIC19.36■□□□□ 0.69
FAM78BQ5VT40 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
FAM78BQ5VT40 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
FAM78BQ5VT40 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC19.35■□□□□ 0.69
FAM78BQ5VT40 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
FAM78BQ5VT40 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC19.35■□□□□ 0.69
FAM78BQ5VT40 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC19.35■□□□□ 0.69
FAM78BQ5VT40 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC19.35■□□□□ 0.69
FAM78BQ5VT40 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
FAM78BQ5VT40 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
FAM78BQ5VT40 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
FAM78BQ5VT40 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
FAM78BQ5VT40 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
FAM78BQ5VT40 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
FAM78BQ5VT40 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC19.33■□□□□ 0.68
FAM78BQ5VT40 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
FAM78BQ5VT40 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
FAM78BQ5VT40 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
FAM78BQ5VT40 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC19.33■□□□□ 0.68
FAM78BQ5VT40 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
FAM78BQ5VT40 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
FAM78BQ5VT40 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
FAM78BQ5VT40 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
FAM78BQ5VT40 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
FAM78BQ5VT40 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
FAM78BQ5VT40 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
FAM78BQ5VT40 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
FAM78BQ5VT40 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
FAM78BQ5VT40 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
FAM78BQ5VT40 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC19.31■□□□□ 0.68
FAM78BQ5VT40 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC19.31■□□□□ 0.68
FAM78BQ5VT40 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
FAM78BQ5VT40 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
FAM78BQ5VT40 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
FAM78BQ5VT40 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
FAM78BQ5VT40 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
FAM78BQ5VT40 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
FAM78BQ5VT40 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
FAM78BQ5VT40 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
FAM78BQ5VT40 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC19.3■□□□□ 0.68
FAM78BQ5VT40 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
FAM78BQ5VT40 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
FAM78BQ5VT40 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
FAM78BQ5VT40 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
FAM78BQ5VT40 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC19.29■□□□□ 0.68
FAM78BQ5VT40 MIR3665-201ENST00000578708 105 ntBASIC19.29■□□□□ 0.68
FAM78BQ5VT40 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC19.29■□□□□ 0.68
FAM78BQ5VT40 DUX4L28-201ENST00000623687 678 ntBASIC19.29■□□□□ 0.68
FAM78BQ5VT40 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
FAM78BQ5VT40 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
FAM78BQ5VT40 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
FAM78BQ5VT40 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC19.28■□□□□ 0.68
FAM78BQ5VT40 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
FAM78BQ5VT40 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC19.28■□□□□ 0.68
FAM78BQ5VT40 EI24-212ENST00000615917 1407 ntTSL 2 BASIC19.28■□□□□ 0.68
FAM78BQ5VT40 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms