Protein–RNA interactions for Protein: P35790

CHKA, Choline kinase alpha, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKAP35790 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
CHKAP35790 AC022413.1-201ENST00000624602 984 ntBASIC26.12■■□□□ 1.77
CHKAP35790 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CHKAP35790 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
CHKAP35790 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
CHKAP35790 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC26.11■■□□□ 1.77
CHKAP35790 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC26.11■■□□□ 1.77
CHKAP35790 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
CHKAP35790 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
CHKAP35790 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
CHKAP35790 PKM-203ENST00000389093 2279 ntTSL 5 BASIC26.09■■□□□ 1.77
CHKAP35790 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
CHKAP35790 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
CHKAP35790 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC26.09■■□□□ 1.77
CHKAP35790 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
CHKAP35790 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC26.09■■□□□ 1.77
CHKAP35790 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
CHKAP35790 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC26.09■■□□□ 1.77
CHKAP35790 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC26.09■■□□□ 1.77
CHKAP35790 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
CHKAP35790 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC26.08■■□□□ 1.77
CHKAP35790 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
CHKAP35790 HES4-202ENST00000428771 1040 ntTSL 2 BASIC26.08■■□□□ 1.77
CHKAP35790 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC26.08■■□□□ 1.76
CHKAP35790 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
CHKAP35790 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
CHKAP35790 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC26.07■■□□□ 1.76
CHKAP35790 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC26.07■■□□□ 1.76
CHKAP35790 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CHKAP35790 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
CHKAP35790 RNF126P1-201ENST00000567452 1320 ntBASIC26.07■■□□□ 1.76
CHKAP35790 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC26.07■■□□□ 1.76
CHKAP35790 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
CHKAP35790 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CHKAP35790 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC26.06■■□□□ 1.76
CHKAP35790 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CHKAP35790 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC26.05■■□□□ 1.76
CHKAP35790 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC26.04■■□□□ 1.76
CHKAP35790 RARRES2P2-201ENST00000394842 485 ntBASIC26.04■■□□□ 1.76
CHKAP35790 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
CHKAP35790 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
CHKAP35790 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CHKAP35790 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CHKAP35790 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CHKAP35790 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
CHKAP35790 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
CHKAP35790 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CHKAP35790 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC26.03■■□□□ 1.76
CHKAP35790 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
CHKAP35790 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC26.02■■□□□ 1.76
CHKAP35790 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC26.02■■□□□ 1.76
CHKAP35790 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
CHKAP35790 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC26■■□□□ 1.75
CHKAP35790 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC26■■□□□ 1.75
CHKAP35790 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CHKAP35790 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC26■■□□□ 1.75
CHKAP35790 AC126177.7-201ENST00000547904 679 ntBASIC26■■□□□ 1.75
CHKAP35790 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC26■■□□□ 1.75
CHKAP35790 AP002414.2-202ENST00000590929 1450 ntBASIC25.99■■□□□ 1.75
CHKAP35790 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC25.98■■□□□ 1.75
CHKAP35790 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
CHKAP35790 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC25.98■■□□□ 1.75
CHKAP35790 AC060814.1-201ENST00000554326 538 ntBASIC25.98■■□□□ 1.75
CHKAP35790 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
CHKAP35790 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC25.98■■□□□ 1.75
CHKAP35790 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
CHKAP35790 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC25.97■■□□□ 1.75
CHKAP35790 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
CHKAP35790 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC25.97■■□□□ 1.75
CHKAP35790 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC25.97■■□□□ 1.75
CHKAP35790 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC25.96■■□□□ 1.75
CHKAP35790 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC25.96■■□□□ 1.75
CHKAP35790 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
CHKAP35790 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
CHKAP35790 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC25.95■■□□□ 1.74
CHKAP35790 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC25.95■■□□□ 1.74
CHKAP35790 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
CHKAP35790 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
CHKAP35790 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC25.95■■□□□ 1.74
CHKAP35790 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC25.95■■□□□ 1.74
CHKAP35790 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC25.95■■□□□ 1.74
CHKAP35790 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
CHKAP35790 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
CHKAP35790 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC25.94■■□□□ 1.74
CHKAP35790 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
CHKAP35790 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CHKAP35790 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC25.93■■□□□ 1.74
CHKAP35790 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
CHKAP35790 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC25.93■■□□□ 1.74
CHKAP35790 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CHKAP35790 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC25.93■■□□□ 1.74
CHKAP35790 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
CHKAP35790 AC135731.1-201ENST00000569415 2548 ntBASIC25.92■■□□□ 1.74
CHKAP35790 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC25.91■■□□□ 1.74
CHKAP35790 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
CHKAP35790 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC25.91■■□□□ 1.74
CHKAP35790 ABHD17AP5-201ENST00000580133 923 ntBASIC25.91■■□□□ 1.74
CHKAP35790 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC25.9■■□□□ 1.74
CHKAP35790 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
CHKAP35790 AL449106.1-201ENST00000608517 1980 ntBASIC25.89■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms