Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC33.61■■■□□ 2.97
RXRBP28702 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC33.59■■■□□ 2.97
RXRBP28702 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC33.59■■■□□ 2.97
RXRBP28702 AC005837.3-201ENST00000612163 286 ntBASIC33.59■■■□□ 2.97
RXRBP28702 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC33.59■■■□□ 2.97
RXRBP28702 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC33.58■■■□□ 2.97
RXRBP28702 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC33.58■■■□□ 2.97
RXRBP28702 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC33.58■■■□□ 2.97
RXRBP28702 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC33.58■■■□□ 2.97
RXRBP28702 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC33.57■■■□□ 2.96
RXRBP28702 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC33.57■■■□□ 2.96
RXRBP28702 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC33.57■■■□□ 2.96
RXRBP28702 UNC93B8-201ENST00000511903 705 ntBASIC33.57■■■□□ 2.96
RXRBP28702 KRT125P-201ENST00000546827 989 ntBASIC33.57■■■□□ 2.96
RXRBP28702 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC33.56■■■□□ 2.96
RXRBP28702 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC33.56■■■□□ 2.96
RXRBP28702 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC33.56■■■□□ 2.96
RXRBP28702 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC33.56■■■□□ 2.96
RXRBP28702 KRT16P3-201ENST00000439127 1283 ntBASIC33.56■■■□□ 2.96
RXRBP28702 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC33.56■■■□□ 2.96
RXRBP28702 MIR4787-201ENST00000607364 84 ntBASIC33.56■■■□□ 2.96
RXRBP28702 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC33.56■■■□□ 2.96
RXRBP28702 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC33.55■■■□□ 2.96
RXRBP28702 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC33.55■■■□□ 2.96
RXRBP28702 RARRES2P6-201ENST00000567333 442 ntBASIC33.55■■■□□ 2.96
RXRBP28702 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC33.55■■■□□ 2.96
RXRBP28702 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC33.54■■■□□ 2.96
RXRBP28702 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC33.54■■■□□ 2.96
RXRBP28702 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC33.53■■■□□ 2.96
RXRBP28702 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC33.53■■■□□ 2.96
RXRBP28702 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC33.53■■■□□ 2.96
RXRBP28702 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC33.52■■■□□ 2.96
RXRBP28702 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC33.52■■■□□ 2.96
RXRBP28702 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC33.52■■■□□ 2.96
RXRBP28702 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC33.52■■■□□ 2.96
RXRBP28702 AC019171.1-201ENST00000601251 1056 ntBASIC33.52■■■□□ 2.96
RXRBP28702 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC33.51■■■□□ 2.96
RXRBP28702 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC33.51■■■□□ 2.95
RXRBP28702 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC33.51■■■□□ 2.95
RXRBP28702 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC33.49■■■□□ 2.95
RXRBP28702 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC33.49■■■□□ 2.95
RXRBP28702 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC33.49■■■□□ 2.95
RXRBP28702 MIR3960-201ENST00000583311 91 ntBASIC33.49■■■□□ 2.95
RXRBP28702 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC33.49■■■□□ 2.95
RXRBP28702 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC33.48■■■□□ 2.95
RXRBP28702 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC33.48■■■□□ 2.95
RXRBP28702 AC104564.3-201ENST00000582367 638 ntBASIC33.48■■■□□ 2.95
RXRBP28702 AC110285.6-201ENST00000617652 491 ntBASIC33.48■■■□□ 2.95
RXRBP28702 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC33.48■■■□□ 2.95
RXRBP28702 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC33.47■■■□□ 2.95
RXRBP28702 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC33.47■■■□□ 2.95
RXRBP28702 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC33.47■■■□□ 2.95
RXRBP28702 PFN2-211ENST00000489155 636 ntTSL 4 BASIC33.47■■■□□ 2.95
RXRBP28702 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC33.47■■■□□ 2.95
RXRBP28702 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC33.47■■■□□ 2.95
RXRBP28702 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC33.47■■■□□ 2.95
RXRBP28702 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC33.46■■■□□ 2.95
RXRBP28702 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC33.46■■■□□ 2.95
RXRBP28702 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC33.45■■■□□ 2.95
RXRBP28702 TRIR-202ENST00000588213 841 ntTSL 3 BASIC33.45■■■□□ 2.95
RXRBP28702 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC33.44■■■□□ 2.94
RXRBP28702 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC33.44■■■□□ 2.94
RXRBP28702 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC33.44■■■□□ 2.94
RXRBP28702 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC33.44■■■□□ 2.94
RXRBP28702 AC131281.2-201ENST00000520478 145 ntBASIC33.44■■■□□ 2.94
RXRBP28702 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC33.44■■■□□ 2.94
RXRBP28702 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC33.44■■■□□ 2.94
RXRBP28702 MEST-211ENST00000437945 1455 ntTSL 5 BASIC33.44■■■□□ 2.94
RXRBP28702 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC33.43■■■□□ 2.94
RXRBP28702 GUK1-205ENST00000366722 850 ntTSL 3 BASIC33.42■■■□□ 2.94
RXRBP28702 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC33.42■■■□□ 2.94
RXRBP28702 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC33.42■■■□□ 2.94
RXRBP28702 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC33.41■■■□□ 2.94
RXRBP28702 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC33.4■■■□□ 2.94
RXRBP28702 AL136116.3-201ENST00000402907 1138 ntBASIC33.4■■■□□ 2.94
RXRBP28702 BX664725.1-201ENST00000438252 379 ntBASIC33.4■■■□□ 2.94
RXRBP28702 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC33.39■■■□□ 2.94
RXRBP28702 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC33.39■■■□□ 2.94
RXRBP28702 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC33.39■■■□□ 2.94
RXRBP28702 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC33.39■■■□□ 2.94
RXRBP28702 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC33.39■■■□□ 2.94
RXRBP28702 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC33.39■■■□□ 2.94
RXRBP28702 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC33.39■■■□□ 2.94
RXRBP28702 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC33.38■■■□□ 2.93
RXRBP28702 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC33.38■■■□□ 2.93
RXRBP28702 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC33.37■■■□□ 2.93
RXRBP28702 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC33.37■■■□□ 2.93
RXRBP28702 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC33.37■■■□□ 2.93
RXRBP28702 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC33.37■■■□□ 2.93
RXRBP28702 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC33.37■■■□□ 2.93
RXRBP28702 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC33.37■■■□□ 2.93
RXRBP28702 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC33.37■■■□□ 2.93
RXRBP28702 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC33.36■■■□□ 2.93
RXRBP28702 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC33.35■■■□□ 2.93
RXRBP28702 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC33.35■■■□□ 2.93
RXRBP28702 AC026271.2-201ENST00000428091 497 ntBASIC33.35■■■□□ 2.93
RXRBP28702 RPP21-222ENST00000433076 577 ntTSL 2 BASIC33.35■■■□□ 2.93
RXRBP28702 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC33.34■■■□□ 2.93
RXRBP28702 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC33.34■■■□□ 2.93
RXRBP28702 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC33.34■■■□□ 2.93
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms