Protein–RNA interactions for Protein: P23394

PRP28, Pre-mRNA-splicing ATP-dependent RNA helicase PRP28, yeastyeast

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PRP28P23394 PCL10YGL134W 1302 nt6.68□□□□□ -1.34
PRP28P23394 QCR6YFR033C 444 nt6.67□□□□□ -1.34
PRP28P23394 YGL118CYGL118C 438 nt6.67□□□□□ -1.34
PRP28P23394 SLD7YOR060C 774 nt6.67□□□□□ -1.34
PRP28P23394 tL(UAA)B1tL(UAA)B1 84 nt6.66□□□□□ -1.34
PRP28P23394 tL(UAA)B2tL(UAA)B2 84 nt6.66□□□□□ -1.34
PRP28P23394 tL(UAA)DtL(UAA)D 84 nt6.66□□□□□ -1.34
PRP28P23394 SUP51tL(UAA)J 84 nt6.66□□□□□ -1.34
PRP28P23394 tL(UAA)KtL(UAA)K 84 nt6.66□□□□□ -1.34
PRP28P23394 tL(UAA)LtL(UAA)L 84 nt6.66□□□□□ -1.34
PRP28P23394 tL(UAA)NtL(UAA)N 84 nt6.66□□□□□ -1.34
PRP28P23394 YGL260WYGL260W 231 nt6.66□□□□□ -1.34
PRP28P23394 FUS3YBL016W 1062 nt6.66□□□□□ -1.34
PRP28P23394 YOR343CYOR343C 327 nt6.66□□□□□ -1.34
PRP28P23394 VBA5YKR105C 1749 nt6.66□□□□□ -1.34
PRP28P23394 SPS22YCL048W 1392 nt6.66□□□□□ -1.34
PRP28P23394 RRP1YDR087C 837 nt6.65□□□□□ -1.34
PRP28P23394 REV7YIL139C 738 nt6.65□□□□□ -1.34
PRP28P23394 YKL147CYKL147C 618 nt6.65□□□□□ -1.34
PRP28P23394 AFG3YER017C 2286 nt6.64□□□□□ -1.35
PRP28P23394 COA2YPL189C-A 207 nt6.64□□□□□ -1.35
PRP28P23394 YFL052WYFL052W 1398 nt6.64□□□□□ -1.35
PRP28P23394 CHS5YLR330W 2016 nt6.64□□□□□ -1.35
PRP28P23394 YJR142WYJR142W 1029 nt6.63□□□□□ -1.35
PRP28P23394 ERG12YMR208W 1332 nt6.63□□□□□ -1.35
PRP28P23394 HRB1YNL004W 1365 nt6.63□□□□□ -1.35
PRP28P23394 OST3YOR085W 1053 nt6.63□□□□□ -1.35
PRP28P23394 TOS1YBR162C 1368 nt6.63□□□□□ -1.35
PRP28P23394 GAA1YLR088W 1845 nt6.62□□□□□ -1.35
PRP28P23394 MMS21YEL019C 804 nt6.62□□□□□ -1.35
PRP28P23394 AVO2YMR068W 1281 nt6.62□□□□□ -1.35
PRP28P23394 PRE2YPR103W 864 nt6.62□□□□□ -1.35
PRP28P23394 MSI1YBR195C 1269 nt6.62□□□□□ -1.35
PRP28P23394 ECM30YLR436C 3825 nt6.62□□□□□ -1.35
PRP28P23394 FCY2YER056C 1602 nt6.61□□□□□ -1.35
PRP28P23394 BUD9YGR041W 1644 nt6.61□□□□□ -1.35
PRP28P23394 CMR1YDL156W 1569 nt6.61□□□□□ -1.35
PRP28P23394 YHP1YDR451C 1062 nt6.61□□□□□ -1.35
PRP28P23394 PIL1YGR086C 1020 nt6.61□□□□□ -1.35
PRP28P23394 MOD5YOR274W 1287 nt6.61□□□□□ -1.35
PRP28P23394 OSM1YJR051W 1506 nt6.6□□□□□ -1.35
PRP28P23394 SEC23YPR181C 2307 nt6.6□□□□□ -1.35
PRP28P23394 HXT15YDL245C 1704 nt6.6□□□□□ -1.35
PRP28P23394 HXT16YJR158W 1704 nt6.6□□□□□ -1.35
PRP28P23394 YCR041WYCR041W 333 nt6.6□□□□□ -1.35
PRP28P23394 YJL213WYJL213W 996 nt6.6□□□□□ -1.35
PRP28P23394 YOR012WYOR012W 414 nt6.6□□□□□ -1.35
PRP28P23394 LIP5YOR196C 1245 nt6.6□□□□□ -1.35
PRP28P23394 JIP4YDR475C 2631 nt6.6□□□□□ -1.35
PRP28P23394 RQC1YDR333C 2172 nt6.59□□□□□ -1.35
PRP28P23394 SNF4YGL115W 969 nt6.59□□□□□ -1.35
PRP28P23394 LOT6YLR011W 576 nt6.59□□□□□ -1.35
PRP28P23394 SKP1YDR328C 585 nt6.58□□□□□ -1.36
PRP28P23394 YGL081WYGL081W 963 nt6.58□□□□□ -1.36
PRP28P23394 EFM1YHL039W 1758 nt6.58□□□□□ -1.36
PRP28P23394 MHP1YJL042W 4197 nt6.58□□□□□ -1.36
PRP28P23394 YIL092WYIL092W 1902 nt6.58□□□□□ -1.36
PRP28P23394 NMA2YGR010W 1188 nt6.57□□□□□ -1.36
PRP28P23394 PAC10YGR078C 600 nt6.57□□□□□ -1.36
PRP28P23394 AIM2YAL049C 741 nt6.57□□□□□ -1.36
PRP28P23394 KIN1YDR122W 3195 nt6.57□□□□□ -1.36
PRP28P23394 PET494YNR045W 1470 nt6.57□□□□□ -1.36
PRP28P23394 NUP57YGR119C 1626 nt6.57□□□□□ -1.36
PRP28P23394 SKY1YMR216C 2229 nt6.57□□□□□ -1.36
PRP28P23394 CDC3YLR314C 1563 nt6.57□□□□□ -1.36
PRP28P23394 NMT1YLR195C 1368 nt6.57□□□□□ -1.36
PRP28P23394 GAT1YFL021W 1533 nt6.56□□□□□ -1.36
PRP28P23394 EXG2YDR261C 1689 nt6.56□□□□□ -1.36
PRP28P23394 HHY1YEL059W 309 nt6.56□□□□□ -1.36
PRP28P23394 YER147C-AYER147C-A 411 nt6.56□□□□□ -1.36
PRP28P23394 CDC11YJR076C 1248 nt6.56□□□□□ -1.36
PRP28P23394 BUD20YLR074C 501 nt6.56□□□□□ -1.36
PRP28P23394 CCW12YLR110C 402 nt6.56□□□□□ -1.36
PRP28P23394 TAF4YMR005W 1167 nt6.56□□□□□ -1.36
PRP28P23394 MRPL24YMR193W 777 nt6.56□□□□□ -1.36
PRP28P23394 PET20YPL159C 762 nt6.56□□□□□ -1.36
PRP28P23394 CDS1YBR029C 1374 nt6.56□□□□□ -1.36
PRP28P23394 EMP65YER140W 1671 nt6.55□□□□□ -1.36
PRP28P23394 NUP84YDL116W 2181 nt6.55□□□□□ -1.36
PRP28P23394 RSP5YER125W 2430 nt6.55□□□□□ -1.36
PRP28P23394 YAL016C-AYAL016C-A 315 nt6.55□□□□□ -1.36
PRP28P23394 TAF11YML015C 1041 nt6.55□□□□□ -1.36
PRP28P23394 YNR048WYNR048W 1182 nt6.55□□□□□ -1.36
PRP28P23394 snR78snR78 87 nt6.54□□□□□ -1.36
PRP28P23394 SUF3tG(CCC)D 72 nt6.54□□□□□ -1.36
PRP28P23394 FRE5YOR384W 2085 nt6.54□□□□□ -1.36
PRP28P23394 ELP3YPL086C 1674 nt6.53□□□□□ -1.36
PRP28P23394 YEL074WYEL074W 339 nt6.53□□□□□ -1.36
PRP28P23394 YLR112WYLR112W 420 nt6.53□□□□□ -1.36
PRP28P23394 URE2YNL229C 1065 nt6.53□□□□□ -1.36
PRP28P23394 CIT2YCR005C 1383 nt6.53□□□□□ -1.36
PRP28P23394 MSN2YMR037C 2115 nt6.53□□□□□ -1.36
PRP28P23394 GUF1YLR289W 1938 nt6.52□□□□□ -1.37
PRP28P23394 YHR140WYHR140W 720 nt6.52□□□□□ -1.37
PRP28P23394 IRS4YKR019C 1848 nt6.52□□□□□ -1.37
PRP28P23394 HXT17YNR072W 1695 nt6.52□□□□□ -1.37
PRP28P23394 EDC2YER035W 438 nt6.51□□□□□ -1.37
PRP28P23394 LYS12YIL094C 1116 nt6.51□□□□□ -1.37
PRP28P23394 NCA3YJL116C 1014 nt6.51□□□□□ -1.37
PRP28P23394 TIF2YJL138C 1188 nt6.51□□□□□ -1.37
Retrieved 100 of 7,029 protein–RNA pairs in 18.4 ms