Protein–RNA interactions for Protein: P0C2J1

TY1B-PR3, Transposon Ty1-PR3 Gag-Pol polyprotein, yeastyeast

Known RBP Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-PR3P0C2J1 YRB2YIL063C 984 nt10.37□□□□□ -0.75
TY1B-PR3P0C2J1 DIA4YHR011W 1341 nt10.36□□□□□ -0.75
TY1B-PR3P0C2J1 YNL017CYNL017C 339 nt10.35□□□□□ -0.75
TY1B-PR3P0C2J1 VPS24YKL041W 675 nt10.34□□□□□ -0.75
TY1B-PR3P0C2J1 SGF29YCL010C 780 nt10.34□□□□□ -0.75
TY1B-PR3P0C2J1 ADE2YOR128C 1716 nt10.34□□□□□ -0.75
TY1B-PR3P0C2J1 SYF2YGR129W 648 nt10.34□□□□□ -0.75
TY1B-PR3P0C2J1 YHR213W-AYHR213W-A 234 nt10.34□□□□□ -0.75
TY1B-PR3P0C2J1 DOT1YDR440W 1749 nt10.33□□□□□ -0.76
TY1B-PR3P0C2J1 YDR327WYDR327W 327 nt10.33□□□□□ -0.76
TY1B-PR3P0C2J1 YDL218WYDL218W 954 nt10.32□□□□□ -0.76
TY1B-PR3P0C2J1 YGL260WYGL260W 231 nt10.31□□□□□ -0.76
TY1B-PR3P0C2J1 SNF7YLR025W 723 nt10.3□□□□□ -0.76
TY1B-PR3P0C2J1 MSO1YNR049C 633 nt10.3□□□□□ -0.76
TY1B-PR3P0C2J1 ZRT2YLR130C 1269 nt10.29□□□□□ -0.76
TY1B-PR3P0C2J1 KSH1YNL024C-A 219 nt10.29□□□□□ -0.76
TY1B-PR3P0C2J1 ENV7YPL236C 1095 nt10.29□□□□□ -0.76
TY1B-PR3P0C2J1 VBA5YKR105C 1749 nt10.28□□□□□ -0.76
TY1B-PR3P0C2J1 FRA1YLL029W 2250 nt10.28□□□□□ -0.76
TY1B-PR3P0C2J1 YDL172CYDL172C 480 nt10.27□□□□□ -0.77
TY1B-PR3P0C2J1 SNN1YNL086W 309 nt10.27□□□□□ -0.77
TY1B-PR3P0C2J1 ELA1YNL230C 1140 nt10.26□□□□□ -0.77
TY1B-PR3P0C2J1 RUP1YOR138C 2016 nt10.26□□□□□ -0.77
TY1B-PR3P0C2J1 YLR126CYLR126C 756 nt10.25□□□□□ -0.77
TY1B-PR3P0C2J1 ERP5YHR110W 639 nt10.24□□□□□ -0.77
TY1B-PR3P0C2J1 SIT4YDL047W 936 nt10.24□□□□□ -0.77
TY1B-PR3P0C2J1 CBR1YIL043C 855 nt10.24□□□□□ -0.77
TY1B-PR3P0C2J1 PSR2YLR019W 1194 nt10.24□□□□□ -0.77
TY1B-PR3P0C2J1 YNL200CYNL200C 741 nt10.24□□□□□ -0.77
TY1B-PR3P0C2J1 DFM1YDR411C 1026 nt10.23□□□□□ -0.77
TY1B-PR3P0C2J1 PRY3YJL078C 2646 nt10.22□□□□□ -0.77
TY1B-PR3P0C2J1 ERG1YGR175C 1491 nt10.22□□□□□ -0.77
TY1B-PR3P0C2J1 MTF2YDL044C 1323 nt10.22□□□□□ -0.77
TY1B-PR3P0C2J1 YHK8YHR048W 1545 nt10.22□□□□□ -0.77
TY1B-PR3P0C2J1 SDH4YDR178W 546 nt10.21□□□□□ -0.77
TY1B-PR3P0C2J1 TCB1YOR086C 3561 nt10.21□□□□□ -0.77
TY1B-PR3P0C2J1 NUP57YGR119C 1626 nt10.2□□□□□ -0.78
TY1B-PR3P0C2J1 YBR056C-BYBR056C-B 159 nt10.19□□□□□ -0.78
TY1B-PR3P0C2J1 DUR3YHL016C 2208 nt10.19□□□□□ -0.78
TY1B-PR3P0C2J1 NHA1YLR138W 2958 nt10.19□□□□□ -0.78
TY1B-PR3P0C2J1 DID2YKR035W-A 615 nt10.19□□□□□ -0.78
TY1B-PR3P0C2J1 SWD1YAR003W 1281 nt10.19□□□□□ -0.78
TY1B-PR3P0C2J1 HBS1YKR084C 1836 nt10.18□□□□□ -0.78
TY1B-PR3P0C2J1 PPH22YDL188C 1134 nt10.18□□□□□ -0.78
TY1B-PR3P0C2J1 SCS7YMR272C 1155 nt10.18□□□□□ -0.78
TY1B-PR3P0C2J1 COQ1YBR003W 1422 nt10.17□□□□□ -0.78
TY1B-PR3P0C2J1 IRC5YFR038W 2562 nt10.17□□□□□ -0.78
TY1B-PR3P0C2J1 DOT5YIL010W 648 nt10.17□□□□□ -0.78
TY1B-PR3P0C2J1 SHP1YBL058W 1272 nt10.17□□□□□ -0.78
TY1B-PR3P0C2J1 PHO85YPL031C 918 nt10.17□□□□□ -0.78
TY1B-PR3P0C2J1 RPN11YFR004W 921 nt10.16□□□□□ -0.78
TY1B-PR3P0C2J1 SGF73YGL066W 1974 nt10.15□□□□□ -0.78
TY1B-PR3P0C2J1 EXG2YDR261C 1689 nt10.15□□□□□ -0.78
TY1B-PR3P0C2J1 RSC9YML127W 1746 nt10.15□□□□□ -0.79
TY1B-PR3P0C2J1 PTC3YBL056W 1407 nt10.14□□□□□ -0.79
TY1B-PR3P0C2J1 HEL2YDR266C 1920 nt10.13□□□□□ -0.79
TY1B-PR3P0C2J1 GCV3YAL044C 513 nt10.13□□□□□ -0.79
TY1B-PR3P0C2J1 HEM2YGL040C 1029 nt10.12□□□□□ -0.79
TY1B-PR3P0C2J1 PTC4YBR125C 1182 nt10.11□□□□□ -0.79
TY1B-PR3P0C2J1 MSG5YNL053W 1470 nt10.11□□□□□ -0.79
TY1B-PR3P0C2J1 MNS1YJR131W 1650 nt10.1□□□□□ -0.79
TY1B-PR3P0C2J1 YGR054WYGR054W 1929 nt10.1□□□□□ -0.79
TY1B-PR3P0C2J1 YMR034CYMR034C 1305 nt10.1□□□□□ -0.79
TY1B-PR3P0C2J1 CCT8YJL008C 1707 nt10.1□□□□□ -0.79
TY1B-PR3P0C2J1 YSC83YHR017W 1158 nt10.09□□□□□ -0.79
TY1B-PR3P0C2J1 RSC30YHR056C 2652 nt10.09□□□□□ -0.79
TY1B-PR3P0C2J1 RPL10YLR075W 666 nt10.08□□□□□ -0.8
TY1B-PR3P0C2J1 URH1YDR400W 1023 nt10.07□□□□□ -0.8
TY1B-PR3P0C2J1 MRPS12YNR036C 462 nt10.07□□□□□ -0.8
TY1B-PR3P0C2J1 MDH2YOL126C 1134 nt10.07□□□□□ -0.8
TY1B-PR3P0C2J1 TIM22YDL217C 624 nt10.06□□□□□ -0.8
TY1B-PR3P0C2J1 RVB2YPL235W 1416 nt10.06□□□□□ -0.8
TY1B-PR3P0C2J1 YDR015CYDR015C 240 nt10.06□□□□□ -0.8
TY1B-PR3P0C2J1 BUD32YGR262C 786 nt10.06□□□□□ -0.8
TY1B-PR3P0C2J1 ATP10YLR393W 840 nt10.06□□□□□ -0.8
TY1B-PR3P0C2J1 YOR072WYOR072W 315 nt10.06□□□□□ -0.8
TY1B-PR3P0C2J1 CDC23YHR166C 1881 nt10.05□□□□□ -0.8
TY1B-PR3P0C2J1 MLS1YNL117W 1665 nt10.05□□□□□ -0.8
TY1B-PR3P0C2J1 UTP4YDR324C 2331 nt10.05□□□□□ -0.8
TY1B-PR3P0C2J1 GNA1YFL017C 480 nt10.04□□□□□ -0.8
TY1B-PR3P0C2J1 SRL2YLR082C 1179 nt10.03□□□□□ -0.8
TY1B-PR3P0C2J1 AMN1YBR158W 1650 nt10.03□□□□□ -0.8
TY1B-PR3P0C2J1 GON7YJL184W 372 nt10.02□□□□□ -0.81
TY1B-PR3P0C2J1 FCP1YMR277W 2199 nt10.02□□□□□ -0.81
TY1B-PR3P0C2J1 PPM2YOL141W 2088 nt10.01□□□□□ -0.81
TY1B-PR3P0C2J1 GLC8YMR311C 690 nt10.01□□□□□ -0.81
TY1B-PR3P0C2J1 ARE2YNR019W 1929 nt10□□□□□ -0.81
TY1B-PR3P0C2J1 YNL285WYNL285W 372 nt10□□□□□ -0.81
TY1B-PR3P0C2J1 TSR3YOR006C 942 nt10□□□□□ -0.81
TY1B-PR3P0C2J1 YPR127WYPR127W 1038 nt10□□□□□ -0.81
TY1B-PR3P0C2J1 POX1YGL205W 2247 nt9.99□□□□□ -0.81
TY1B-PR3P0C2J1 MRPS28YDR337W 861 nt9.98□□□□□ -0.81
TY1B-PR3P0C2J1 ECM14YHR132C 1293 nt9.98□□□□□ -0.81
TY1B-PR3P0C2J1 OGG1YML060W 1131 nt9.98□□□□□ -0.81
TY1B-PR3P0C2J1 YOR041CYOR041C 432 nt9.98□□□□□ -0.81
TY1B-PR3P0C2J1 AAT2YLR027C 1257 nt9.98□□□□□ -0.81
TY1B-PR3P0C2J1 PMT7YDR307W 1989 nt9.97□□□□□ -0.81
TY1B-PR3P0C2J1 LYS1YIR034C 1122 nt9.97□□□□□ -0.81
TY1B-PR3P0C2J1 FCY2YER056C 1602 nt9.97□□□□□ -0.81
TY1B-PR3P0C2J1 YEL034C-AYEL034C-A 603 nt9.96□□□□□ -0.82
Retrieved 100 of 7,029 protein–RNA pairs in 15 ms