Protein–RNA interactions for Protein: O60494

CUBN, Cubilin, humanhuman

Predictions only

Length 3,623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNO60494 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
CUBNO60494 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CUBNO60494 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CUBNO60494 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CUBNO60494 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CUBNO60494 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CUBNO60494 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CUBNO60494 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC20.16■□□□□ 0.82
CUBNO60494 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CUBNO60494 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CUBNO60494 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CUBNO60494 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CUBNO60494 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.15■□□□□ 0.82
CUBNO60494 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.15■□□□□ 0.82
CUBNO60494 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CUBNO60494 AC139795.1-202ENST00000500444 432 ntBASIC20.15■□□□□ 0.82
CUBNO60494 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
CUBNO60494 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC20.15■□□□□ 0.82
CUBNO60494 MEST-211ENST00000437945 1455 ntTSL 5 BASIC20.15■□□□□ 0.82
CUBNO60494 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CUBNO60494 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC20.14■□□□□ 0.82
CUBNO60494 AL359258.2-201ENST00000564063 1566 ntBASIC20.14■□□□□ 0.81
CUBNO60494 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CUBNO60494 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.14■□□□□ 0.81
CUBNO60494 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
CUBNO60494 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CUBNO60494 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CUBNO60494 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC20.13■□□□□ 0.81
CUBNO60494 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC20.13■□□□□ 0.81
CUBNO60494 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CUBNO60494 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
CUBNO60494 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CUBNO60494 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.12■□□□□ 0.81
CUBNO60494 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.12■□□□□ 0.81
CUBNO60494 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CUBNO60494 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.12■□□□□ 0.81
CUBNO60494 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.12■□□□□ 0.81
CUBNO60494 IDNK-201ENST00000376417 511 ntTSL 5 BASIC20.12■□□□□ 0.81
CUBNO60494 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CUBNO60494 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.12■□□□□ 0.81
CUBNO60494 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CUBNO60494 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
CUBNO60494 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CUBNO60494 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CUBNO60494 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.11■□□□□ 0.81
CUBNO60494 YBX1P4-201ENST00000392794 808 ntBASIC20.1■□□□□ 0.81
CUBNO60494 AC008406.3-201ENST00000620001 1374 ntBASIC20.1■□□□□ 0.81
CUBNO60494 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CUBNO60494 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CUBNO60494 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CUBNO60494 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
CUBNO60494 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.1■□□□□ 0.81
CUBNO60494 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CUBNO60494 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CUBNO60494 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CUBNO60494 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
CUBNO60494 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CUBNO60494 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CUBNO60494 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CUBNO60494 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CUBNO60494 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CUBNO60494 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.07■□□□□ 0.8
CUBNO60494 AL031848.2-201ENST00000607670 837 ntBASIC20.07■□□□□ 0.8
CUBNO60494 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CUBNO60494 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.07■□□□□ 0.8
CUBNO60494 AC093536.1-201ENST00000569153 554 ntBASIC20.07■□□□□ 0.8
CUBNO60494 Z92544.1-202ENST00000571933 1220 ntBASIC20.07■□□□□ 0.8
CUBNO60494 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.07■□□□□ 0.8
CUBNO60494 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CUBNO60494 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.06■□□□□ 0.8
CUBNO60494 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC20.06■□□□□ 0.8
CUBNO60494 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CUBNO60494 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CUBNO60494 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.04■□□□□ 0.8
CUBNO60494 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC20.04■□□□□ 0.8
CUBNO60494 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.04■□□□□ 0.8
CUBNO60494 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.04■□□□□ 0.8
CUBNO60494 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CUBNO60494 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
CUBNO60494 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CUBNO60494 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC20.03■□□□□ 0.8
CUBNO60494 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.03■□□□□ 0.8
CUBNO60494 AC074183.2-201ENST00000623112 922 ntBASIC20.03■□□□□ 0.8
CUBNO60494 HYI-210ENST00000486909 905 ntTSL 5 BASIC20.02■□□□□ 0.8
CUBNO60494 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CUBNO60494 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.02■□□□□ 0.8
CUBNO60494 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.02■□□□□ 0.79
CUBNO60494 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC20.02■□□□□ 0.79
CUBNO60494 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
CUBNO60494 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CUBNO60494 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.01■□□□□ 0.79
CUBNO60494 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CUBNO60494 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20■□□□□ 0.79
CUBNO60494 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC20■□□□□ 0.79
CUBNO60494 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20■□□□□ 0.79
CUBNO60494 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CUBNO60494 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
CUBNO60494 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CUBNO60494 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CUBNO60494 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 188.6 ms