Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
SNAP47Q5SQN1 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNAP47Q5SQN1 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
SNAP47Q5SQN1 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNAP47Q5SQN1 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SNAP47Q5SQN1 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
SNAP47Q5SQN1 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNAP47Q5SQN1 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.72■□□□□ 0.43
SNAP47Q5SQN1 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNAP47Q5SQN1 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
SNAP47Q5SQN1 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNAP47Q5SQN1 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNAP47Q5SQN1 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.72■□□□□ 0.43
SNAP47Q5SQN1 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.72■□□□□ 0.43
SNAP47Q5SQN1 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNAP47Q5SQN1 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.72■□□□□ 0.43
SNAP47Q5SQN1 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNAP47Q5SQN1 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.72■□□□□ 0.43
SNAP47Q5SQN1 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
SNAP47Q5SQN1 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.72■□□□□ 0.43
SNAP47Q5SQN1 IGHV3-41-201ENST00000613121 348 ntBASIC17.72■□□□□ 0.43
SNAP47Q5SQN1 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.72■□□□□ 0.43
SNAP47Q5SQN1 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNAP47Q5SQN1 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.72■□□□□ 0.43
SNAP47Q5SQN1 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNAP47Q5SQN1 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SNAP47Q5SQN1 AC005332.7-201ENST00000614046 2005 ntBASIC17.72■□□□□ 0.43
SNAP47Q5SQN1 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SNAP47Q5SQN1 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNAP47Q5SQN1 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SNAP47Q5SQN1 MTMR9LP-203ENST00000426597 1545 ntBASIC17.72■□□□□ 0.43
SNAP47Q5SQN1 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.72■□□□□ 0.43
SNAP47Q5SQN1 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNAP47Q5SQN1 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SNAP47Q5SQN1 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNAP47Q5SQN1 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.71■□□□□ 0.43
SNAP47Q5SQN1 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.71■□□□□ 0.43
SNAP47Q5SQN1 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
SNAP47Q5SQN1 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNAP47Q5SQN1 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SNAP47Q5SQN1 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNAP47Q5SQN1 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
SNAP47Q5SQN1 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SNAP47Q5SQN1 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
SNAP47Q5SQN1 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
SNAP47Q5SQN1 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNAP47Q5SQN1 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNAP47Q5SQN1 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNAP47Q5SQN1 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNAP47Q5SQN1 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.71■□□□□ 0.43
SNAP47Q5SQN1 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.71■□□□□ 0.43
SNAP47Q5SQN1 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.71■□□□□ 0.43
SNAP47Q5SQN1 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNAP47Q5SQN1 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.43
SNAP47Q5SQN1 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SNAP47Q5SQN1 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.71■□□□□ 0.43
SNAP47Q5SQN1 AC009065.1-201ENST00000564055 1225 ntBASIC17.71■□□□□ 0.43
SNAP47Q5SQN1 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.71■□□□□ 0.43
SNAP47Q5SQN1 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.71■□□□□ 0.43
SNAP47Q5SQN1 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SNAP47Q5SQN1 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNAP47Q5SQN1 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SNAP47Q5SQN1 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNAP47Q5SQN1 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.71■□□□□ 0.43
SNAP47Q5SQN1 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
SNAP47Q5SQN1 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.71■□□□□ 0.43
SNAP47Q5SQN1 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNAP47Q5SQN1 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNAP47Q5SQN1 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNAP47Q5SQN1 KRT8P50-201ENST00000562022 1438 ntBASIC17.71■□□□□ 0.43
SNAP47Q5SQN1 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
SNAP47Q5SQN1 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNAP47Q5SQN1 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.71■□□□□ 0.42
SNAP47Q5SQN1 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
SNAP47Q5SQN1 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
SNAP47Q5SQN1 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNAP47Q5SQN1 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SNAP47Q5SQN1 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNAP47Q5SQN1 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SNAP47Q5SQN1 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNAP47Q5SQN1 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.7■□□□□ 0.42
SNAP47Q5SQN1 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SNAP47Q5SQN1 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
SNAP47Q5SQN1 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
SNAP47Q5SQN1 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SNAP47Q5SQN1 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNAP47Q5SQN1 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
SNAP47Q5SQN1 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.7■□□□□ 0.42
SNAP47Q5SQN1 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNAP47Q5SQN1 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.7■□□□□ 0.42
SNAP47Q5SQN1 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.7■□□□□ 0.42
SNAP47Q5SQN1 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNAP47Q5SQN1 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.7■□□□□ 0.42
SNAP47Q5SQN1 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.7■□□□□ 0.42
SNAP47Q5SQN1 AC026396.1-201ENST00000419388 421 ntBASIC17.7■□□□□ 0.42
SNAP47Q5SQN1 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.7■□□□□ 0.42
SNAP47Q5SQN1 TOB2P1-201ENST00000469761 992 ntBASIC17.7■□□□□ 0.42
SNAP47Q5SQN1 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.7■□□□□ 0.42
SNAP47Q5SQN1 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.7■□□□□ 0.42
SNAP47Q5SQN1 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms