RNA–Protein interactions for RNA: ENST00000563788.5

YPEL3-204, Transcript of yippee like 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene YPEL3, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YPEL3-204ENST00000563788 NISCHQ9Y2I1 1504 aa44.94■■■■■ 4.78
YPEL3-204ENST00000563788 CCDC180Q9P1Z9 1646 aa40.24■■■■■ 4.03
YPEL3-204ENST00000563788 ABCC9O60706 1549 aa39.9■■■■□ 3.98
YPEL3-204ENST00000563788 RB1CC1Q8TDY2 1594 aa38.14■■■■□ 3.7
YPEL3-204ENST00000563788 NACADO15069 1562 aa37.97■■■■□ 3.67
YPEL3-204ENST00000563788 DCAF8L2P0C7V8 631 aa37.63■■■■□ 3.61
YPEL3-204ENST00000563788 MYO15BQ96JP2 1530 aa37.61■■■■□ 3.61
YPEL3-204ENST00000563788 ZCCHC6Q5VYS8 1495 aaKnown RBP37.32■■■■□ 3.56
YPEL3-204ENST00000563788 UNC13AQ9UPW8 1703 aa37.23■■■■□ 3.55
YPEL3-204ENST00000563788 DCAF1Q9Y4B6 1507 aa37.2■■■■□ 3.55
YPEL3-204ENST00000563788 DNAJC5BQ9UF47 199 aa37.2■■■■□ 3.55
YPEL3-204ENST00000563788 PABPN1Q86U42 306 aaKnown RBP eCLIP37.14■■■■□ 3.54
YPEL3-204ENST00000563788 BICRAQ9NZM4 1560 aa37.04■■■■□ 3.52
YPEL3-204ENST00000563788 SHROOM4Q9ULL8 1493 aa36.66■■■■□ 3.46
YPEL3-204ENST00000563788 SCRIBQ14160 1630 aa36.59■■■■□ 3.45
YPEL3-204ENST00000563788 EIF4G1Q04637 1599 aaKnown RBP36.1■■■■□ 3.37
YPEL3-204ENST00000563788 CC2D2AQ9P2K1 1620 aa36.08■■■■□ 3.37
YPEL3-204ENST00000563788 CECR2Q9BXF3 1484 aa35.95■■■■□ 3.35
YPEL3-204ENST00000563788 NCAPD3P42695 1498 aa35.06■■■■□ 3.2
YPEL3-204ENST00000563788 SMARCA4P51532 1647 aa34.99■■■■□ 3.19
YPEL3-204ENST00000563788 ATAD2BQ9ULI0 1458 aa34.97■■■■□ 3.19
YPEL3-204ENST00000563788 SMARCA2P51531 1590 aa34.89■■■■□ 3.18
YPEL3-204ENST00000563788 BAZ1AQ9NRL2 1556 aaPredicted RBP34.86■■■■□ 3.17
YPEL3-204ENST00000563788 HMGXB3Q12766 1538 aa34.84■■■■□ 3.17
YPEL3-204ENST00000563788 PEG3Q9GZU2 1588 aa34.71■■■■□ 3.15
YPEL3-204ENST00000563788 BAZ1BQ9UIG0 1483 aaKnown RBP34.62■■■■□ 3.13
YPEL3-204ENST00000563788 MROH2BQ7Z745 1585 aa34.6■■■■□ 3.13
YPEL3-204ENST00000563788 ERCC6Q03468 1493 aa34.43■■■■□ 3.1
YPEL3-204ENST00000563788 CUX2O14529 1486 aa34.36■■■■□ 3.09
YPEL3-204ENST00000563788 NESP48681 1621 aa34.35■■■■□ 3.09
YPEL3-204ENST00000563788 LAMC3Q9Y6N6 1575 aa34.21■■■■□ 3.07
YPEL3-204ENST00000563788 WIZO95785 1651 aa34.15■■■■□ 3.06
YPEL3-204ENST00000563788 THOC2Q8NI27 1593 aaKnown RBP34.02■■■■□ 3.04
YPEL3-204ENST00000563788 DNAJC5Q9H3Z4 198 aa34■■■■□ 3.03
YPEL3-204ENST00000563788 RSF1Q96T23 1441 aaPredicted RBP33.99■■■■□ 3.03
YPEL3-204ENST00000563788 PDS5BQ9NTI5 1447 aa33.99■■■■□ 3.03
YPEL3-204ENST00000563788 CADPSQ9ULU8 1353 aa33.98■■■■□ 3.03
YPEL3-204ENST00000563788 KIF21AQ7Z4S6 1674 aa33.92■■■■□ 3.02
YPEL3-204ENST00000563788 TOP2AP11388 1531 aaKnown RBP33.81■■■■□ 3
YPEL3-204ENST00000563788 MRC2Q9UBG0 1479 aa33.69■■■□□ 2.98
YPEL3-204ENST00000563788 CFTRP13569 1480 aa33.67■■■□□ 2.98
YPEL3-204ENST00000563788 WDR62O43379 1518 aa33.63■■■□□ 2.97
YPEL3-204ENST00000563788 CEP164Q9UPV0 1460 aa33.59■■■□□ 2.97
YPEL3-204ENST00000563788 FANCD2Q9BXW9 1451 aa33.57■■■□□ 2.97
YPEL3-204ENST00000563788 CCDC88BA6NC98 1476 aa33.4■■■□□ 2.94
YPEL3-204ENST00000563788 PRDM2Q13029 1718 aa33.31■■■□□ 2.92
YPEL3-204ENST00000563788 URB2Q14146 1524 aaKnown RBP33.29■■■□□ 2.92
YPEL3-204ENST00000563788 TOPBP1Q92547 1522 aa32.97■■■□□ 2.87
YPEL3-204ENST00000563788 ABCC8Q09428 1581 aa32.96■■■□□ 2.87
YPEL3-204ENST00000563788 IFT140Q96RY7 1462 aa32.93■■■□□ 2.86
YPEL3-204ENST00000563788 DNMBPQ6XZF7 1577 aa32.89■■■□□ 2.86
YPEL3-204ENST00000563788 ZNF608Q9ULD9 1512 aaPredicted RBP32.82■■■□□ 2.85
YPEL3-204ENST00000563788 OSCARQ8IYS5 282 aa32.76■■■□□ 2.83
YPEL3-204ENST00000563788 TARBP1Q13395 1621 aaKnown RBP32.69■■■□□ 2.82
YPEL3-204ENST00000563788 POLA1P09884 1462 aaPredicted RBP32.67■■■□□ 2.82
YPEL3-204ENST00000563788 EIF4G3O43432 1585 aaKnown RBP32.66■■■□□ 2.82
YPEL3-204ENST00000563788 SUPT5HO00267 1087 aaKnown RBP32.54■■■□□ 2.8
YPEL3-204ENST00000563788 AQRO60306 1485 aaKnown RBP eCLIP32.54■■■□□ 2.86e-9■■■■□ 26.1
YPEL3-204ENST00000563788 TRIM41Q8WV44 630 aa32.52■■■□□ 2.8
YPEL3-204ENST00000563788 RAD54L2Q9Y4B4 1467 aa32.5■■■□□ 2.79
YPEL3-204ENST00000563788 CUX1P39880 1505 aa32.5■■■□□ 2.79
YPEL3-204ENST00000563788 SOGA1O94964 1423 aa32.49■■■□□ 2.79
YPEL3-204ENST00000563788 FGD5Q6ZNL6 1462 aa32.48■■■□□ 2.79
YPEL3-204ENST00000563788 WDR97A6NE52 1622 aa32.42■■■□□ 2.78
YPEL3-204ENST00000563788 TDRD9Q8NDG6 1382 aaKnown RBP32.37■■■□□ 2.77
YPEL3-204ENST00000563788 CHD1O14646 1710 aa32.33■■■□□ 2.77
YPEL3-204ENST00000563788 RIMBP3CA6NJZ7 1639 aa32.33■■■□□ 2.77
YPEL3-204ENST00000563788 RIMBP3BA6NNM3 1639 aa32.33■■■□□ 2.77
YPEL3-204ENST00000563788 RIMBP3Q9UFD9 1639 aa32.33■■■□□ 2.77
YPEL3-204ENST00000563788 ARHGEF11O15085 1522 aa32.27■■■□□ 2.76
YPEL3-204ENST00000563788 SNAPC4Q5SXM2 1469 aa32.23■■■□□ 2.75
YPEL3-204ENST00000563788 GRIN2BQ13224 1484 aa32.21■■■□□ 2.75
YPEL3-204ENST00000563788 MAGI1Q96QZ7 1491 aaPredicted RBP32.2■■■□□ 2.75
YPEL3-204ENST00000563788 FBLN2P98095 1184 aa32.19■■■□□ 2.74
YPEL3-204ENST00000563788 ABCA10Q8WWZ4 1543 aa32.16■■■□□ 2.74
YPEL3-204ENST00000563788 GAPVD1Q14C86 1478 aa32.11■■■□□ 2.73
YPEL3-204ENST00000563788 ABCA5Q8WWZ7 1642 aa32.08■■■□□ 2.73
YPEL3-204ENST00000563788 SYNJ2O15056 1496 aa32.08■■■□□ 2.73
YPEL3-204ENST00000563788 BIVM-ERCC5R4GMW8 1640 aa32.07■■■□□ 2.72
YPEL3-204ENST00000563788 PBRM1Q86U86 1689 aa32.06■■■□□ 2.72
YPEL3-204ENST00000563788 CHMP7Q8WUX9 453 aaPredicted RBP32.06■■■□□ 2.72
YPEL3-204ENST00000563788 TOP2BQ02880 1626 aa32.06■■■□□ 2.72
YPEL3-204ENST00000563788 WRNQ14191 1432 aaPredicted RBP eCLIP32.05■■■□□ 2.72
YPEL3-204ENST00000563788 CLASP1Q7Z460 1538 aa32.05■■■□□ 2.72
YPEL3-204ENST00000563788 SYNJ1O43426 1573 aa32.02■■■□□ 2.72
YPEL3-204ENST00000563788 ARAP1Q96P48 1450 aa31.97■■■□□ 2.71
YPEL3-204ENST00000563788 CYB5RLQ6IPT4 315 aa31.94■■■□□ 2.7
YPEL3-204ENST00000563788 ADAMTS12P58397 1594 aa31.81■■■□□ 2.68
YPEL3-204ENST00000563788 GRIN2AQ12879 1464 aa31.79■■■□□ 2.68
YPEL3-204ENST00000563788 ERICH3Q5RHP9 1530 aa31.76■■■□□ 2.68
YPEL3-204ENST00000563788 FHAD1B1AJZ9 1412 aa31.74■■■□□ 2.67
YPEL3-204ENST00000563788 NUP160Q12769 1436 aa31.71■■■□□ 2.67
YPEL3-204ENST00000563788 CEP170Q5SW79 1584 aa31.65■■■□□ 2.66
YPEL3-204ENST00000563788 SHROOM2Q13796 1616 aa31.53■■■□□ 2.64
YPEL3-204ENST00000563788 ERCC6L2Q5T890 1561 aa31.51■■■□□ 2.63
YPEL3-204ENST00000563788 TRHP20396 242 aaPredicted RBP31.46■■■□□ 2.63
YPEL3-204ENST00000563788 KIF27Q86VH2 1401 aa31.42■■■□□ 2.62
YPEL3-204ENST00000563788 IGF1RP08069 1367 aa31.39■■■□□ 2.62
YPEL3-204ENST00000563788 RUSC2Q8N2Y8 1516 aa31.37■■■□□ 2.61
YPEL3-204ENST00000563788 CUL7Q14999 1698 aa31.33■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms