RNA–Protein interactions for RNA: ENST00000525095.2

VPS26B-202, Transcript of VPS26, retromer complex component B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene VPS26B, Length 1,558 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-202ENST00000525095 NISCHQ9Y2I1 1504 aa43.05■■■■■ 4.48
VPS26B-202ENST00000525095 CCDC180Q9P1Z9 1646 aa37.72■■■■□ 3.63
VPS26B-202ENST00000525095 ZCCHC6Q5VYS8 1495 aaKnown RBP36.07■■■■□ 3.36
VPS26B-202ENST00000525095 ABCC9O60706 1549 aa36.03■■■■□ 3.36
VPS26B-202ENST00000525095 DCAF8L2P0C7V8 631 aa35.69■■■■□ 3.3
VPS26B-202ENST00000525095 DCAF1Q9Y4B6 1507 aa35.6■■■■□ 3.29
VPS26B-202ENST00000525095 MYO15BQ96JP2 1530 aa35.34■■■■□ 3.25
VPS26B-202ENST00000525095 NACADO15069 1562 aa35.24■■■■□ 3.23
VPS26B-202ENST00000525095 RB1CC1Q8TDY2 1594 aa35.03■■■■□ 3.2
VPS26B-202ENST00000525095 SHROOM4Q9ULL8 1493 aa34.79■■■■□ 3.16
VPS26B-202ENST00000525095 SCRIBQ14160 1630 aa34.6■■■■□ 3.13
VPS26B-202ENST00000525095 UNC13AQ9UPW8 1703 aa34.27■■■■□ 3.08
VPS26B-202ENST00000525095 BICRAQ9NZM4 1560 aa33.97■■■■□ 3.03
VPS26B-202ENST00000525095 PABPN1Q86U42 306 aaKnown RBP eCLIP33.9■■■■□ 3.02
VPS26B-202ENST00000525095 CECR2Q9BXF3 1484 aa33.47■■■□□ 2.95
VPS26B-202ENST00000525095 SUPT5HO00267 1087 aaKnown RBP33.3■■■□□ 2.92
VPS26B-202ENST00000525095 BAZ1AQ9NRL2 1556 aaPredicted RBP33.27■■■□□ 2.92
VPS26B-202ENST00000525095 RSF1Q96T23 1441 aaPredicted RBP33.23■■■□□ 2.91
VPS26B-202ENST00000525095 MROH2BQ7Z745 1585 aa33.23■■■□□ 2.91
VPS26B-202ENST00000525095 SMARCA4P51532 1647 aa33.16■■■□□ 2.9
VPS26B-202ENST00000525095 EIF4G1Q04637 1599 aaKnown RBP32.98■■■□□ 2.87
VPS26B-202ENST00000525095 WIZO95785 1651 aa32.92■■■□□ 2.86
VPS26B-202ENST00000525095 PEG3Q9GZU2 1588 aa32.79■■■□□ 2.84
VPS26B-202ENST00000525095 ATAD2BQ9ULI0 1458 aa32.73■■■□□ 2.83
VPS26B-202ENST00000525095 SMARCA2P51531 1590 aa32.71■■■□□ 2.83
VPS26B-202ENST00000525095 CC2D2AQ9P2K1 1620 aa32.6■■■□□ 2.81
VPS26B-202ENST00000525095 TOP2AP11388 1531 aaKnown RBP32.59■■■□□ 2.81
VPS26B-202ENST00000525095 NCAPD3P42695 1498 aa32.54■■■□□ 2.8
VPS26B-202ENST00000525095 BAZ1BQ9UIG0 1483 aaKnown RBP32.52■■■□□ 2.8
VPS26B-202ENST00000525095 HMGXB3Q12766 1538 aa32.44■■■□□ 2.78
VPS26B-202ENST00000525095 CCDC88BA6NC98 1476 aa32.25■■■□□ 2.75
VPS26B-202ENST00000525095 DNAJC5BQ9UF47 199 aa32.15■■■□□ 2.74
VPS26B-202ENST00000525095 CFTRP13569 1480 aa31.69■■■□□ 2.66
VPS26B-202ENST00000525095 CADPSQ9ULU8 1353 aa31.68■■■□□ 2.66
VPS26B-202ENST00000525095 CHIC1Q5VXU3 224 aa31.67■■■□□ 2.66
VPS26B-202ENST00000525095 NESP48681 1621 aa31.5■■■□□ 2.63
VPS26B-202ENST00000525095 LAMC3Q9Y6N6 1575 aa31.48■■■□□ 2.63
VPS26B-202ENST00000525095 PRDM2Q13029 1718 aa31.47■■■□□ 2.63
VPS26B-202ENST00000525095 ABCC8Q09428 1581 aa31.42■■■□□ 2.62
VPS26B-202ENST00000525095 TRIM41Q8WV44 630 aa31.36■■■□□ 2.61
VPS26B-202ENST00000525095 FANCD2Q9BXW9 1451 aa31.31■■■□□ 2.6
VPS26B-202ENST00000525095 WRNQ14191 1432 aaPredicted RBP eCLIP31.3■■■□□ 2.6
VPS26B-202ENST00000525095 PDS5BQ9NTI5 1447 aa31.27■■■□□ 2.6
VPS26B-202ENST00000525095 SYNJ1O43426 1573 aa31.16■■■□□ 2.58
VPS26B-202ENST00000525095 CEP164Q9UPV0 1460 aa31.15■■■□□ 2.58
VPS26B-202ENST00000525095 KIF21AQ7Z4S6 1674 aa31.11■■■□□ 2.57
VPS26B-202ENST00000525095 CUX1P39880 1505 aa31.09■■■□□ 2.57
VPS26B-202ENST00000525095 TOP2BQ02880 1626 aa31.08■■■□□ 2.57
VPS26B-202ENST00000525095 BIVM-ERCC5R4GMW8 1640 aa31.05■■■□□ 2.56
VPS26B-202ENST00000525095 DNMBPQ6XZF7 1577 aa30.95■■■□□ 2.55
VPS26B-202ENST00000525095 ERCC6Q03468 1493 aa30.94■■■□□ 2.54
VPS26B-202ENST00000525095 URB2Q14146 1524 aaKnown RBP30.94■■■□□ 2.54
VPS26B-202ENST00000525095 TOPBP1Q92547 1522 aa30.92■■■□□ 2.54
VPS26B-202ENST00000525095 MRC2Q9UBG0 1479 aa30.88■■■□□ 2.53
VPS26B-202ENST00000525095 FGD5Q6ZNL6 1462 aa30.82■■■□□ 2.53
VPS26B-202ENST00000525095 SOGA1O94964 1423 aa30.76■■■□□ 2.51
VPS26B-202ENST00000525095 FAM9AQ8IZU1 332 aaPredicted RBP30.75■■■□□ 2.51
VPS26B-202ENST00000525095 POLA1P09884 1462 aaPredicted RBP30.74■■■□□ 2.51
VPS26B-202ENST00000525095 WDR62O43379 1518 aa30.72■■■□□ 2.51
VPS26B-202ENST00000525095 THOC2Q8NI27 1593 aaKnown RBP30.71■■■□□ 2.51
VPS26B-202ENST00000525095 RUSC2Q8N2Y8 1516 aa30.67■■■□□ 2.5
VPS26B-202ENST00000525095 EEA1Q15075 1411 aa30.64■■■□□ 2.5
VPS26B-202ENST00000525095 RAD54L2Q9Y4B4 1467 aa30.64■■■□□ 2.49
VPS26B-202ENST00000525095 CUX2O14529 1486 aa30.55■■■□□ 2.48
VPS26B-202ENST00000525095 KIF27Q86VH2 1401 aa30.55■■■□□ 2.48
VPS26B-202ENST00000525095 ABCA10Q8WWZ4 1543 aa30.55■■■□□ 2.48
VPS26B-202ENST00000525095 CSRNP3Q8WYN3 585 aa30.53■■■□□ 2.48
VPS26B-202ENST00000525095 TARBP1Q13395 1621 aaKnown RBP30.49■■■□□ 2.47
VPS26B-202ENST00000525095 WDR97A6NE52 1622 aa30.46■■■□□ 2.47
VPS26B-202ENST00000525095 IFT140Q96RY7 1462 aa30.44■■■□□ 2.46
VPS26B-202ENST00000525095 LOC105371045A0A1W2PR82 267 aa30.43■■■□□ 2.46
VPS26B-202ENST00000525095 TDRD9Q8NDG6 1382 aaKnown RBP30.39■■■□□ 2.45
VPS26B-202ENST00000525095 IGF1RP08069 1367 aa30.33■■■□□ 2.45
VPS26B-202ENST00000525095 ABCA5Q8WWZ7 1642 aa30.32■■■□□ 2.44
VPS26B-202ENST00000525095 EHMT2Q96KQ7 1210 aa30.31■■■□□ 2.44
VPS26B-202ENST00000525095 GAPVD1Q14C86 1478 aa30.3■■■□□ 2.44
VPS26B-202ENST00000525095 ZNF608Q9ULD9 1512 aaPredicted RBP30.27■■■□□ 2.44
VPS26B-202ENST00000525095 AQRO60306 1485 aaKnown RBP eCLIP30.26■■■□□ 2.432e-9■■■■■ 39.4
VPS26B-202ENST00000525095 KIF21BO75037 1637 aa30.24■■■□□ 2.43
VPS26B-202ENST00000525095 PRXQ9BXM0 1461 aa30.23■■■□□ 2.43
VPS26B-202ENST00000525095 ERICH3Q5RHP9 1530 aa30.19■■■□□ 2.42
VPS26B-202ENST00000525095 GOLGA3Q08378 1498 aa30.19■■■□□ 2.42
VPS26B-202ENST00000525095 CARMIL1Q5VZK9 1371 aa30.16■■■□□ 2.42
VPS26B-202ENST00000525095 RAPGEF2Q9Y4G8 1499 aa30.15■■■□□ 2.42
VPS26B-202ENST00000525095 EIF4G3O43432 1585 aaKnown RBP30.15■■■□□ 2.42
VPS26B-202ENST00000525095 GRIN2BQ13224 1484 aa30.13■■■□□ 2.41
VPS26B-202ENST00000525095 PBRM1Q86U86 1689 aa30.13■■■□□ 2.41
VPS26B-202ENST00000525095 CUL7Q14999 1698 aa30.11■■■□□ 2.41
VPS26B-202ENST00000525095 UBTFP17480 764 aaKnown RBP30.09■■■□□ 2.41
VPS26B-202ENST00000525095 TNIKQ9UKE5 1360 aa30.03■■■□□ 2.4
VPS26B-202ENST00000525095 FHAD1B1AJZ9 1412 aa29.97■■■□□ 2.39
VPS26B-202ENST00000525095 SNAPC4Q5SXM2 1469 aa29.96■■■□□ 2.39
VPS26B-202ENST00000525095 ADAMTS12P58397 1594 aa29.95■■■□□ 2.38
VPS26B-202ENST00000525095 MAGI1Q96QZ7 1491 aaPredicted RBP29.91■■■□□ 2.38
VPS26B-202ENST00000525095 CEP162Q5TB80 1403 aa29.82■■■□□ 2.36
VPS26B-202ENST00000525095 SYNJ2O15056 1496 aa29.81■■■□□ 2.36
VPS26B-202ENST00000525095 CHMP7Q8WUX9 453 aaPredicted RBP29.77■■■□□ 2.36
VPS26B-202ENST00000525095 GRIN2AQ12879 1464 aa29.75■■■□□ 2.35
VPS26B-202ENST00000525095 FBLN2P98095 1184 aa29.73■■■□□ 2.35
VPS26B-202ENST00000525095 RANGAP1P46060 587 aaPredicted RBP29.7■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms