RNA–Protein interactions for RNA: ENST00000551105.1

GBX2-203, Transcript of gastrulation brain homeobox 2, humanhuman

TSL 1 (best) BASIC

Gene GBX2, Length 1,307 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GBX2-203ENST00000551105 NISCHQ9Y2I1 1504 aa43.94■■■■■ 4.63
GBX2-203ENST00000551105 CCDC180Q9P1Z9 1646 aa39.03■■■■□ 3.84
GBX2-203ENST00000551105 ABCC9O60706 1549 aa38.51■■■■□ 3.76
GBX2-203ENST00000551105 RB1CC1Q8TDY2 1594 aa36.85■■■■□ 3.49
GBX2-203ENST00000551105 ZCCHC6Q5VYS8 1495 aaKnown RBP36.73■■■■□ 3.47
GBX2-203ENST00000551105 NACADO15069 1562 aa36.67■■■■□ 3.46
GBX2-203ENST00000551105 DCAF8L2P0C7V8 631 aa36.63■■■■□ 3.45
GBX2-203ENST00000551105 DCAF1Q9Y4B6 1507 aa36.32■■■■□ 3.4
GBX2-203ENST00000551105 MYO15BQ96JP2 1530 aa36.3■■■■□ 3.4
GBX2-203ENST00000551105 UNC13AQ9UPW8 1703 aa36.08■■■■□ 3.37
GBX2-203ENST00000551105 PABPN1Q86U42 306 aaKnown RBP eCLIP35.89■■■■□ 3.34
GBX2-203ENST00000551105 BICRAQ9NZM4 1560 aa35.72■■■■□ 3.31
GBX2-203ENST00000551105 SCRIBQ14160 1630 aa35.72■■■■□ 3.31
GBX2-203ENST00000551105 DNAJC5BQ9UF47 199 aa35.6■■■■□ 3.29
GBX2-203ENST00000551105 SHROOM4Q9ULL8 1493 aa35.25■■■■□ 3.23
GBX2-203ENST00000551105 EIF4G1Q04637 1599 aaKnown RBP34.84■■■■□ 3.17
GBX2-203ENST00000551105 CC2D2AQ9P2K1 1620 aa34.81■■■■□ 3.16
GBX2-203ENST00000551105 CECR2Q9BXF3 1484 aa34.62■■■■□ 3.13
GBX2-203ENST00000551105 SMARCA4P51532 1647 aa34.13■■■■□ 3.05
GBX2-203ENST00000551105 BAZ1AQ9NRL2 1556 aaPredicted RBP34.05■■■■□ 3.04
GBX2-203ENST00000551105 MROH2BQ7Z745 1585 aa33.93■■■■□ 3.02
GBX2-203ENST00000551105 ATAD2BQ9ULI0 1458 aa33.8■■■■□ 3
GBX2-203ENST00000551105 NCAPD3P42695 1498 aa33.8■■■■□ 3
GBX2-203ENST00000551105 SMARCA2P51531 1590 aa33.77■■■■□ 3
GBX2-203ENST00000551105 PEG3Q9GZU2 1588 aa33.7■■■□□ 2.99
GBX2-203ENST00000551105 WIZO95785 1651 aa33.67■■■□□ 2.98
GBX2-203ENST00000551105 HMGXB3Q12766 1538 aa33.65■■■□□ 2.98
GBX2-203ENST00000551105 RSF1Q96T23 1441 aaPredicted RBP33.58■■■□□ 2.97
GBX2-203ENST00000551105 BAZ1BQ9UIG0 1483 aaKnown RBP33.55■■■□□ 2.96
GBX2-203ENST00000551105 TOP2AP11388 1531 aaKnown RBP33.25■■■□□ 2.91
GBX2-203ENST00000551105 ERCC6Q03468 1493 aa33.25■■■□□ 2.91
GBX2-203ENST00000551105 NESP48681 1621 aa33.21■■■□□ 2.91
GBX2-203ENST00000551105 LAMC3Q9Y6N6 1575 aa33.03■■■□□ 2.88
GBX2-203ENST00000551105 SUPT5HO00267 1087 aaKnown RBP32.96■■■□□ 2.87
GBX2-203ENST00000551105 CUX2O14529 1486 aa32.96■■■□□ 2.87
GBX2-203ENST00000551105 KIF21AQ7Z4S6 1674 aa32.86■■■□□ 2.85
GBX2-203ENST00000551105 CADPSQ9ULU8 1353 aa32.81■■■□□ 2.84
GBX2-203ENST00000551105 THOC2Q8NI27 1593 aaKnown RBP32.79■■■□□ 2.84
GBX2-203ENST00000551105 PDS5BQ9NTI5 1447 aa32.79■■■□□ 2.84
GBX2-203ENST00000551105 CCDC88BA6NC98 1476 aa32.79■■■□□ 2.84
GBX2-203ENST00000551105 PRDM2Q13029 1718 aa32.6■■■□□ 2.81
GBX2-203ENST00000551105 CFTRP13569 1480 aa32.56■■■□□ 2.8
GBX2-203ENST00000551105 MRC2Q9UBG0 1479 aa32.53■■■□□ 2.8
GBX2-203ENST00000551105 CEP164Q9UPV0 1460 aa32.51■■■□□ 2.79
GBX2-203ENST00000551105 FANCD2Q9BXW9 1451 aa32.5■■■□□ 2.79
GBX2-203ENST00000551105 WDR62O43379 1518 aa32.43■■■□□ 2.78
GBX2-203ENST00000551105 DNAJC5Q9H3Z4 198 aa32.33■■■□□ 2.77
GBX2-203ENST00000551105 URB2Q14146 1524 aaKnown RBP32.19■■■□□ 2.74
GBX2-203ENST00000551105 TOPBP1Q92547 1522 aa31.93■■■□□ 2.7
GBX2-203ENST00000551105 DNMBPQ6XZF7 1577 aa31.93■■■□□ 2.7
GBX2-203ENST00000551105 ABCC8Q09428 1581 aa31.85■■■□□ 2.69
GBX2-203ENST00000551105 CUX1P39880 1505 aa31.83■■■□□ 2.69
GBX2-203ENST00000551105 IFT140Q96RY7 1462 aa31.81■■■□□ 2.68
GBX2-203ENST00000551105 SYNJ1O43426 1573 aa31.73■■■□□ 2.67
GBX2-203ENST00000551105 ZNF608Q9ULD9 1512 aaPredicted RBP31.72■■■□□ 2.67
GBX2-203ENST00000551105 BIVM-ERCC5R4GMW8 1640 aa31.68■■■□□ 2.66
GBX2-203ENST00000551105 WRNQ14191 1432 aaPredicted RBP eCLIP31.66■■■□□ 2.66
GBX2-203ENST00000551105 POLA1P09884 1462 aaPredicted RBP31.65■■■□□ 2.66
GBX2-203ENST00000551105 FGD5Q6ZNL6 1462 aa31.65■■■□□ 2.66
GBX2-203ENST00000551105 TOP2BQ02880 1626 aa31.63■■■□□ 2.65
GBX2-203ENST00000551105 EIF4G3O43432 1585 aaKnown RBP31.63■■■□□ 2.65
GBX2-203ENST00000551105 TARBP1Q13395 1621 aaKnown RBP31.6■■■□□ 2.65
GBX2-203ENST00000551105 RAD54L2Q9Y4B4 1467 aa31.52■■■□□ 2.64
GBX2-203ENST00000551105 WDR97A6NE52 1622 aa31.51■■■□□ 2.64
GBX2-203ENST00000551105 OSCARQ8IYS5 282 aa31.49■■■□□ 2.63
GBX2-203ENST00000551105 AQRO60306 1485 aaKnown RBP eCLIP31.48■■■□□ 2.63
GBX2-203ENST00000551105 SOGA1O94964 1423 aa31.48■■■□□ 2.63
GBX2-203ENST00000551105 TDRD9Q8NDG6 1382 aaKnown RBP31.35■■■□□ 2.61
GBX2-203ENST00000551105 CHD1O14646 1710 aa31.34■■■□□ 2.61
GBX2-203ENST00000551105 ABCA10Q8WWZ4 1543 aa31.3■■■□□ 2.6
GBX2-203ENST00000551105 ABCA5Q8WWZ7 1642 aa31.27■■■□□ 2.6
GBX2-203ENST00000551105 PBRM1Q86U86 1689 aa31.26■■■□□ 2.6
GBX2-203ENST00000551105 TRIM41Q8WV44 630 aa31.24■■■□□ 2.59
GBX2-203ENST00000551105 SNAPC4Q5SXM2 1469 aa31.22■■■□□ 2.59
GBX2-203ENST00000551105 FBLN2P98095 1184 aa31.22■■■□□ 2.59
GBX2-203ENST00000551105 GRIN2BQ13224 1484 aa31.16■■■□□ 2.58
GBX2-203ENST00000551105 GAPVD1Q14C86 1478 aa31.13■■■□□ 2.57
GBX2-203ENST00000551105 RIMBP3CA6NJZ7 1639 aa31.12■■■□□ 2.57
GBX2-203ENST00000551105 RIMBP3BA6NNM3 1639 aa31.12■■■□□ 2.57
GBX2-203ENST00000551105 RIMBP3Q9UFD9 1639 aa31.12■■■□□ 2.57
GBX2-203ENST00000551105 MAGI1Q96QZ7 1491 aaPredicted RBP31.12■■■□□ 2.57
GBX2-203ENST00000551105 ARHGEF11O15085 1522 aa31.05■■■□□ 2.56
GBX2-203ENST00000551105 CHMP7Q8WUX9 453 aaPredicted RBP31.02■■■□□ 2.56
GBX2-203ENST00000551105 SYNJ2O15056 1496 aa31.01■■■□□ 2.55
GBX2-203ENST00000551105 ADAMTS12P58397 1594 aa30.97■■■□□ 2.55
GBX2-203ENST00000551105 ERICH3Q5RHP9 1530 aa30.93■■■□□ 2.54
GBX2-203ENST00000551105 KIF27Q86VH2 1401 aa30.93■■■□□ 2.54
GBX2-203ENST00000551105 CHIC1Q5VXU3 224 aa30.91■■■□□ 2.54
GBX2-203ENST00000551105 CLASP1Q7Z460 1538 aa30.9■■■□□ 2.54
GBX2-203ENST00000551105 RUSC2Q8N2Y8 1516 aa30.88■■■□□ 2.53
GBX2-203ENST00000551105 CUL7Q14999 1698 aa30.81■■■□□ 2.52
GBX2-203ENST00000551105 GRIN2AQ12879 1464 aa30.78■■■□□ 2.52
GBX2-203ENST00000551105 ARAP1Q96P48 1450 aa30.78■■■□□ 2.52
GBX2-203ENST00000551105 CYB5RLQ6IPT4 315 aa30.76■■■□□ 2.52
GBX2-203ENST00000551105 FHAD1B1AJZ9 1412 aa30.74■■■□□ 2.51
GBX2-203ENST00000551105 IGF1RP08069 1367 aa30.71■■■□□ 2.51
GBX2-203ENST00000551105 CEP170Q5SW79 1584 aa30.67■■■□□ 2.5
GBX2-203ENST00000551105 NUP160Q12769 1436 aa30.62■■■□□ 2.49
GBX2-203ENST00000551105 CARMIL1Q5VZK9 1371 aa30.55■■■□□ 2.48
GBX2-203ENST00000551105 EEA1Q15075 1411 aa30.52■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms