RNA–Protein interactions for RNA: ENST00000613121.1

IGHV3-41-201, Transcript of immunoglobulin heavy variable 3-41 (pseudogene), humanhuman

BASIC

Gene IGHV3-41, Length 348 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-41-201ENST00000613121 NISCHQ9Y2I1 1504 aa43.57■■■■■ 4.56
IGHV3-41-201ENST00000613121 CCDC180Q9P1Z9 1646 aa38.56■■■■□ 3.76
IGHV3-41-201ENST00000613121 ABCC9O60706 1549 aa38.14■■■■□ 3.7
IGHV3-41-201ENST00000613121 DCAF8L2P0C7V8 631 aa36.88■■■■□ 3.49
IGHV3-41-201ENST00000613121 RB1CC1Q8TDY2 1594 aa36.52■■■■□ 3.44
IGHV3-41-201ENST00000613121 NACADO15069 1562 aa36.44■■■■□ 3.42
IGHV3-41-201ENST00000613121 ZCCHC6Q5VYS8 1495 aaKnown RBP36.22■■■■□ 3.39
IGHV3-41-201ENST00000613121 MYO15BQ96JP2 1530 aa36.13■■■■□ 3.38
IGHV3-41-201ENST00000613121 DCAF1Q9Y4B6 1507 aa35.96■■■■□ 3.35
IGHV3-41-201ENST00000613121 PABPN1Q86U42 306 aaKnown RBP eCLIP35.79■■■■□ 3.32
IGHV3-41-201ENST00000613121 UNC13AQ9UPW8 1703 aa35.43■■■■□ 3.26
IGHV3-41-201ENST00000613121 SCRIBQ14160 1630 aa35.35■■■■□ 3.25
IGHV3-41-201ENST00000613121 BICRAQ9NZM4 1560 aa35.33■■■■□ 3.25
IGHV3-41-201ENST00000613121 DNAJC5BQ9UF47 199 aa35.17■■■■□ 3.22
IGHV3-41-201ENST00000613121 SHROOM4Q9ULL8 1493 aa34.95■■■■□ 3.19
IGHV3-41-201ENST00000613121 EIF4G1Q04637 1599 aaKnown RBP34.48■■■■□ 3.11
IGHV3-41-201ENST00000613121 CC2D2AQ9P2K1 1620 aa34.36■■■■□ 3.09
IGHV3-41-201ENST00000613121 CECR2Q9BXF3 1484 aa34.27■■■■□ 3.08
IGHV3-41-201ENST00000613121 BAZ1AQ9NRL2 1556 aaPredicted RBP33.77■■■■□ 3
IGHV3-41-201ENST00000613121 SMARCA4P51532 1647 aa33.75■■■□□ 2.99
IGHV3-41-201ENST00000613121 ATAD2BQ9ULI0 1458 aa33.71■■■□□ 2.99
IGHV3-41-201ENST00000613121 NCAPD3P42695 1498 aa33.7■■■□□ 2.99
IGHV3-41-201ENST00000613121 SMARCA2P51531 1590 aa33.6■■■□□ 2.97
IGHV3-41-201ENST00000613121 MROH2BQ7Z745 1585 aa33.59■■■□□ 2.97
IGHV3-41-201ENST00000613121 BAZ1BQ9UIG0 1483 aaKnown RBP33.44■■■□□ 2.94
IGHV3-41-201ENST00000613121 HMGXB3Q12766 1538 aa33.4■■■□□ 2.94
IGHV3-41-201ENST00000613121 PEG3Q9GZU2 1588 aa33.37■■■□□ 2.93
IGHV3-41-201ENST00000613121 RSF1Q96T23 1441 aaPredicted RBP33.23■■■□□ 2.91
IGHV3-41-201ENST00000613121 WIZO95785 1651 aa33.16■■■□□ 2.9
IGHV3-41-201ENST00000613121 NESP48681 1621 aa32.93■■■□□ 2.86
IGHV3-41-201ENST00000613121 ERCC6Q03468 1493 aa32.92■■■□□ 2.86
IGHV3-41-201ENST00000613121 TOP2AP11388 1531 aaKnown RBP32.81■■■□□ 2.84
IGHV3-41-201ENST00000613121 CADPSQ9ULU8 1353 aa32.8■■■□□ 2.84
IGHV3-41-201ENST00000613121 LAMC3Q9Y6N6 1575 aa32.74■■■□□ 2.83
IGHV3-41-201ENST00000613121 PDS5BQ9NTI5 1447 aa32.69■■■□□ 2.82
IGHV3-41-201ENST00000613121 SUPT5HO00267 1087 aaKnown RBP32.59■■■□□ 2.81
IGHV3-41-201ENST00000613121 CCDC88BA6NC98 1476 aa32.54■■■□□ 2.8
IGHV3-41-201ENST00000613121 CFTRP13569 1480 aa32.48■■■□□ 2.79
IGHV3-41-201ENST00000613121 CUX2O14529 1486 aa32.48■■■□□ 2.79
IGHV3-41-201ENST00000613121 FANCD2Q9BXW9 1451 aa32.36■■■□□ 2.77
IGHV3-41-201ENST00000613121 KIF21AQ7Z4S6 1674 aa32.34■■■□□ 2.77
IGHV3-41-201ENST00000613121 CEP164Q9UPV0 1460 aa32.31■■■□□ 2.76
IGHV3-41-201ENST00000613121 MRC2Q9UBG0 1479 aa32.28■■■□□ 2.76
IGHV3-41-201ENST00000613121 THOC2Q8NI27 1593 aaKnown RBP32.27■■■□□ 2.76
IGHV3-41-201ENST00000613121 WDR62O43379 1518 aa32.08■■■□□ 2.73
IGHV3-41-201ENST00000613121 URB2Q14146 1524 aaKnown RBP31.99■■■□□ 2.71
IGHV3-41-201ENST00000613121 PRDM2Q13029 1718 aa31.91■■■□□ 2.7
IGHV3-41-201ENST00000613121 ABCC8Q09428 1581 aa31.82■■■□□ 2.68
IGHV3-41-201ENST00000613121 TOPBP1Q92547 1522 aa31.79■■■□□ 2.68
IGHV3-41-201ENST00000613121 DNAJC5Q9H3Z4 198 aa31.77■■■□□ 2.68
IGHV3-41-201ENST00000613121 DNMBPQ6XZF7 1577 aa31.68■■■□□ 2.66
IGHV3-41-201ENST00000613121 IFT140Q96RY7 1462 aa31.65■■■□□ 2.66
IGHV3-41-201ENST00000613121 SOGA1O94964 1423 aa31.52■■■□□ 2.64
IGHV3-41-201ENST00000613121 POLA1P09884 1462 aaPredicted RBP31.52■■■□□ 2.64
IGHV3-41-201ENST00000613121 ZNF608Q9ULD9 1512 aaPredicted RBP31.51■■■□□ 2.63
IGHV3-41-201ENST00000613121 CUX1P39880 1505 aa31.49■■■□□ 2.63
IGHV3-41-201ENST00000613121 RAD54L2Q9Y4B4 1467 aa31.46■■■□□ 2.63
IGHV3-41-201ENST00000613121 FGD5Q6ZNL6 1462 aa31.46■■■□□ 2.63
IGHV3-41-201ENST00000613121 AQRO60306 1485 aaKnown RBP eCLIP31.4■■■□□ 2.62
IGHV3-41-201ENST00000613121 TDRD9Q8NDG6 1382 aaKnown RBP31.38■■■□□ 2.61
IGHV3-41-201ENST00000613121 WRNQ14191 1432 aaPredicted RBP eCLIP31.36■■■□□ 2.61
IGHV3-41-201ENST00000613121 OSCARQ8IYS5 282 aa31.36■■■□□ 2.61
IGHV3-41-201ENST00000613121 TARBP1Q13395 1621 aaKnown RBP31.34■■■□□ 2.61
IGHV3-41-201ENST00000613121 FBLN2P98095 1184 aa31.25■■■□□ 2.59
IGHV3-41-201ENST00000613121 EIF4G3O43432 1585 aaKnown RBP31.25■■■□□ 2.59
IGHV3-41-201ENST00000613121 TOP2BQ02880 1626 aa31.15■■■□□ 2.58
IGHV3-41-201ENST00000613121 SYNJ1O43426 1573 aa31.14■■■□□ 2.58
IGHV3-41-201ENST00000613121 ABCA10Q8WWZ4 1543 aa31.11■■■□□ 2.57
IGHV3-41-201ENST00000613121 CHMP7Q8WUX9 453 aaPredicted RBP31.09■■■□□ 2.57
IGHV3-41-201ENST00000613121 GRIN2BQ13224 1484 aa31.08■■■□□ 2.57
IGHV3-41-201ENST00000613121 GAPVD1Q14C86 1478 aa31.08■■■□□ 2.57
IGHV3-41-201ENST00000613121 BIVM-ERCC5R4GMW8 1640 aa31.07■■■□□ 2.56
IGHV3-41-201ENST00000613121 WDR97A6NE52 1622 aa31.06■■■□□ 2.56
IGHV3-41-201ENST00000613121 SNAPC4Q5SXM2 1469 aa31.04■■■□□ 2.56
IGHV3-41-201ENST00000613121 MAGI1Q96QZ7 1491 aaPredicted RBP30.95■■■□□ 2.55
IGHV3-41-201ENST00000613121 SYNJ2O15056 1496 aa30.87■■■□□ 2.53
IGHV3-41-201ENST00000613121 ABCA5Q8WWZ7 1642 aa30.87■■■□□ 2.53
IGHV3-41-201ENST00000613121 TRIM41Q8WV44 630 aa30.83■■■□□ 2.53
IGHV3-41-201ENST00000613121 CHD1O14646 1710 aa30.81■■■□□ 2.52
IGHV3-41-201ENST00000613121 PBRM1Q86U86 1689 aa30.78■■■□□ 2.52
IGHV3-41-201ENST00000613121 KIF27Q86VH2 1401 aa30.74■■■□□ 2.51
IGHV3-41-201ENST00000613121 FHAD1B1AJZ9 1412 aa30.73■■■□□ 2.51
IGHV3-41-201ENST00000613121 ERICH3Q5RHP9 1530 aa30.72■■■□□ 2.51
IGHV3-41-201ENST00000613121 IGF1RP08069 1367 aa30.66■■■□□ 2.5
IGHV3-41-201ENST00000613121 GRIN2AQ12879 1464 aa30.64■■■□□ 2.5
IGHV3-41-201ENST00000613121 ARHGEF11O15085 1522 aa30.62■■■□□ 2.49
IGHV3-41-201ENST00000613121 ADAMTS12P58397 1594 aa30.62■■■□□ 2.49
IGHV3-41-201ENST00000613121 CYB5RLQ6IPT4 315 aa30.61■■■□□ 2.49
IGHV3-41-201ENST00000613121 RIMBP3CA6NJZ7 1639 aa30.57■■■□□ 2.48
IGHV3-41-201ENST00000613121 RIMBP3BA6NNM3 1639 aa30.57■■■□□ 2.48
IGHV3-41-201ENST00000613121 RIMBP3Q9UFD9 1639 aa30.57■■■□□ 2.48
IGHV3-41-201ENST00000613121 CLASP1Q7Z460 1538 aa30.55■■■□□ 2.48
IGHV3-41-201ENST00000613121 NUP160Q12769 1436 aa30.5■■■□□ 2.47
IGHV3-41-201ENST00000613121 CARMIL1Q5VZK9 1371 aa30.49■■■□□ 2.47
IGHV3-41-201ENST00000613121 CEP170Q5SW79 1584 aa30.42■■■□□ 2.46
IGHV3-41-201ENST00000613121 JPH4Q96JJ6 628 aa30.41■■■□□ 2.46
IGHV3-41-201ENST00000613121 RUSC2Q8N2Y8 1516 aa30.41■■■□□ 2.46
IGHV3-41-201ENST00000613121 ARAP1Q96P48 1450 aa30.37■■■□□ 2.45
IGHV3-41-201ENST00000613121 CUL7Q14999 1698 aa30.34■■■□□ 2.45
IGHV3-41-201ENST00000613121 CHIC1Q5VXU3 224 aa30.27■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms