RNA–Protein interactions for RNA: ENST00000383820.9

RPUSD3-201, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD3, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-201ENST00000383820 NISCHQ9Y2I1 1504 aa45■■■■■ 4.79
RPUSD3-201ENST00000383820 CCDC180Q9P1Z9 1646 aa40.45■■■■■ 4.07
RPUSD3-201ENST00000383820 ABCC9O60706 1549 aa40.4■■■■■ 4.06
RPUSD3-201ENST00000383820 RB1CC1Q8TDY2 1594 aa38.52■■■■□ 3.76
RPUSD3-201ENST00000383820 NACADO15069 1562 aa38.26■■■■□ 3.72
RPUSD3-201ENST00000383820 DNAJC5BQ9UF47 199 aa37.93■■■■□ 3.66
RPUSD3-201ENST00000383820 DCAF8L2P0C7V8 631 aa37.9■■■■□ 3.66
RPUSD3-201ENST00000383820 MYO15BQ96JP2 1530 aa37.77■■■■□ 3.64
RPUSD3-201ENST00000383820 UNC13AQ9UPW8 1703 aa37.6■■■■□ 3.61
RPUSD3-201ENST00000383820 PABPN1Q86U42 306 aaKnown RBP eCLIP37.57■■■■□ 3.6
RPUSD3-201ENST00000383820 BICRAQ9NZM4 1560 aa37.36■■■■□ 3.57
RPUSD3-201ENST00000383820 ZCCHC6Q5VYS8 1495 aaKnown RBP37.28■■■■□ 3.56
RPUSD3-201ENST00000383820 DCAF1Q9Y4B6 1507 aa37.24■■■■□ 3.55
RPUSD3-201ENST00000383820 SHROOM4Q9ULL8 1493 aa36.97■■■■□ 3.51
RPUSD3-201ENST00000383820 SCRIBQ14160 1630 aa36.75■■■■□ 3.47
RPUSD3-201ENST00000383820 CC2D2AQ9P2K1 1620 aa36.53■■■■□ 3.44
RPUSD3-201ENST00000383820 EIF4G1Q04637 1599 aaKnown RBP36.45■■■■□ 3.43
RPUSD3-201ENST00000383820 CECR2Q9BXF3 1484 aa36.43■■■■□ 3.42
RPUSD3-201ENST00000383820 NCAPD3P42695 1498 aa35.31■■■■□ 3.24
RPUSD3-201ENST00000383820 ATAD2BQ9ULI0 1458 aa35.16■■■■□ 3.22
RPUSD3-201ENST00000383820 SMARCA4P51532 1647 aa35.11■■■■□ 3.21
RPUSD3-201ENST00000383820 SMARCA2P51531 1590 aa35.1■■■■□ 3.21
RPUSD3-201ENST00000383820 HMGXB3Q12766 1538 aa35.05■■■■□ 3.2
RPUSD3-201ENST00000383820 BAZ1AQ9NRL2 1556 aaPredicted RBP34.96■■■■□ 3.19
RPUSD3-201ENST00000383820 DNAJC5Q9H3Z4 198 aa34.95■■■■□ 3.19
RPUSD3-201ENST00000383820 CUX2O14529 1486 aa34.94■■■■□ 3.18
RPUSD3-201ENST00000383820 ERCC6Q03468 1493 aa34.91■■■■□ 3.18
RPUSD3-201ENST00000383820 PEG3Q9GZU2 1588 aa34.82■■■■□ 3.16
RPUSD3-201ENST00000383820 BAZ1BQ9UIG0 1483 aaKnown RBP34.81■■■■□ 3.16
RPUSD3-201ENST00000383820 NESP48681 1621 aa34.68■■■■□ 3.14
RPUSD3-201ENST00000383820 MROH2BQ7Z745 1585 aa34.64■■■■□ 3.14
RPUSD3-201ENST00000383820 LAMC3Q9Y6N6 1575 aa34.53■■■■□ 3.12
RPUSD3-201ENST00000383820 THOC2Q8NI27 1593 aaKnown RBP34.4■■■■□ 3.1
RPUSD3-201ENST00000383820 PDS5BQ9NTI5 1447 aa34.32■■■■□ 3.08
RPUSD3-201ENST00000383820 KIF21AQ7Z4S6 1674 aa34.26■■■■□ 3.08
RPUSD3-201ENST00000383820 CADPSQ9ULU8 1353 aa34.22■■■■□ 3.07
RPUSD3-201ENST00000383820 WIZO95785 1651 aa34.2■■■■□ 3.07
RPUSD3-201ENST00000383820 MRC2Q9UBG0 1479 aa34.01■■■■□ 3.03
RPUSD3-201ENST00000383820 WDR62O43379 1518 aa33.94■■■■□ 3.02
RPUSD3-201ENST00000383820 RSF1Q96T23 1441 aaPredicted RBP33.91■■■■□ 3.02
RPUSD3-201ENST00000383820 CEP164Q9UPV0 1460 aa33.86■■■■□ 3.01
RPUSD3-201ENST00000383820 TOP2AP11388 1531 aaKnown RBP33.82■■■■□ 3
RPUSD3-201ENST00000383820 CFTRP13569 1480 aa33.82■■■■□ 3
RPUSD3-201ENST00000383820 FANCD2Q9BXW9 1451 aa33.81■■■■□ 3
RPUSD3-201ENST00000383820 URB2Q14146 1524 aaKnown RBP33.52■■■□□ 2.96
RPUSD3-201ENST00000383820 PRDM2Q13029 1718 aa33.49■■■□□ 2.95
RPUSD3-201ENST00000383820 CCDC88BA6NC98 1476 aa33.41■■■□□ 2.94
RPUSD3-201ENST00000383820 OSCARQ8IYS5 282 aa33.3■■■□□ 2.92
RPUSD3-201ENST00000383820 TRIM41Q8WV44 630 aa33.3■■■□□ 2.92
RPUSD3-201ENST00000383820 IFT140Q96RY7 1462 aa33.2■■■□□ 2.91
RPUSD3-201ENST00000383820 TOPBP1Q92547 1522 aa33.16■■■□□ 2.9
RPUSD3-201ENST00000383820 ABCC8Q09428 1581 aa33.16■■■□□ 2.9
RPUSD3-201ENST00000383820 ZNF608Q9ULD9 1512 aaPredicted RBP33.08■■■□□ 2.89
RPUSD3-201ENST00000383820 DNMBPQ6XZF7 1577 aa33.05■■■□□ 2.88
RPUSD3-201ENST00000383820 EIF4G3O43432 1585 aaKnown RBP32.94■■■□□ 2.86
RPUSD3-201ENST00000383820 TARBP1Q13395 1621 aaKnown RBP32.88■■■□□ 2.85
RPUSD3-201ENST00000383820 RIMBP3CA6NJZ7 1639 aa32.85■■■□□ 2.85
RPUSD3-201ENST00000383820 RIMBP3BA6NNM3 1639 aa32.85■■■□□ 2.85
RPUSD3-201ENST00000383820 RIMBP3Q9UFD9 1639 aa32.85■■■□□ 2.85
RPUSD3-201ENST00000383820 POLA1P09884 1462 aaPredicted RBP32.81■■■□□ 2.84
RPUSD3-201ENST00000383820 AQRO60306 1485 aaKnown RBP eCLIP32.79■■■□□ 2.842e-7■■□□□ 14.1
RPUSD3-201ENST00000383820 ARHGEF11O15085 1522 aa32.75■■■□□ 2.83
RPUSD3-201ENST00000383820 CHD1O14646 1710 aa32.69■■■□□ 2.82
RPUSD3-201ENST00000383820 SOGA1O94964 1423 aa32.67■■■□□ 2.82
RPUSD3-201ENST00000383820 RAD54L2Q9Y4B4 1467 aa32.66■■■□□ 2.82
RPUSD3-201ENST00000383820 WDR97A6NE52 1622 aa32.62■■■□□ 2.81
RPUSD3-201ENST00000383820 FGD5Q6ZNL6 1462 aa32.59■■■□□ 2.81
RPUSD3-201ENST00000383820 TDRD9Q8NDG6 1382 aaKnown RBP32.58■■■□□ 2.81
RPUSD3-201ENST00000383820 FBLN2P98095 1184 aa32.56■■■□□ 2.8
RPUSD3-201ENST00000383820 CUX1P39880 1505 aa32.55■■■□□ 2.8
RPUSD3-201ENST00000383820 CYB5RLQ6IPT4 315 aa32.47■■■□□ 2.79
RPUSD3-201ENST00000383820 SNAPC4Q5SXM2 1469 aa32.47■■■□□ 2.79
RPUSD3-201ENST00000383820 MAGI1Q96QZ7 1491 aaPredicted RBP32.44■■■□□ 2.78
RPUSD3-201ENST00000383820 GRIN2BQ13224 1484 aa32.42■■■□□ 2.78
RPUSD3-201ENST00000383820 ARAP1Q96P48 1450 aa32.42■■■□□ 2.78
RPUSD3-201ENST00000383820 CHMP7Q8WUX9 453 aaPredicted RBP32.36■■■□□ 2.77
RPUSD3-201ENST00000383820 CLASP1Q7Z460 1538 aa32.35■■■□□ 2.77
RPUSD3-201ENST00000383820 SYNJ1O43426 1573 aa32.34■■■□□ 2.77
RPUSD3-201ENST00000383820 SYNJ2O15056 1496 aa32.31■■■□□ 2.76
RPUSD3-201ENST00000383820 SUPT5HO00267 1087 aaKnown RBP32.28■■■□□ 2.76
RPUSD3-201ENST00000383820 GAPVD1Q14C86 1478 aa32.27■■■□□ 2.76
RPUSD3-201ENST00000383820 PBRM1Q86U86 1689 aa32.26■■■□□ 2.75
RPUSD3-201ENST00000383820 ABCA10Q8WWZ4 1543 aa32.26■■■□□ 2.75
RPUSD3-201ENST00000383820 ABCA5Q8WWZ7 1642 aa32.2■■■□□ 2.75
RPUSD3-201ENST00000383820 TRHP20396 242 aaPredicted RBP32.12■■■□□ 2.73
RPUSD3-201ENST00000383820 WRNQ14191 1432 aaPredicted RBP eCLIP32.11■■■□□ 2.73
RPUSD3-201ENST00000383820 BIVM-ERCC5R4GMW8 1640 aa32.05■■■□□ 2.72
RPUSD3-201ENST00000383820 TOP2BQ02880 1626 aa32.04■■■□□ 2.72
RPUSD3-201ENST00000383820 GRIN2AQ12879 1464 aa31.98■■■□□ 2.71
RPUSD3-201ENST00000383820 ADAMTS12P58397 1594 aa31.95■■■□□ 2.71
RPUSD3-201ENST00000383820 NUP160Q12769 1436 aa31.9■■■□□ 2.7
RPUSD3-201ENST00000383820 FHAD1B1AJZ9 1412 aa31.88■■■□□ 2.69
RPUSD3-201ENST00000383820 ERICH3Q5RHP9 1530 aa31.86■■■□□ 2.69
RPUSD3-201ENST00000383820 CEP170Q5SW79 1584 aa31.85■■■□□ 2.69
RPUSD3-201ENST00000383820 ERCC6L2Q5T890 1561 aa31.77■■■□□ 2.68
RPUSD3-201ENST00000383820 SHROOM2Q13796 1616 aa31.77■■■□□ 2.68
RPUSD3-201ENST00000383820 PRG4Q92954 1404 aaPredicted RBP31.56■■■□□ 2.64
RPUSD3-201ENST00000383820 JPH4Q96JJ6 628 aa31.54■■■□□ 2.64
RPUSD3-201ENST00000383820 RUSC2Q8N2Y8 1516 aa31.5■■■□□ 2.63
RPUSD3-201ENST00000383820 KIF27Q86VH2 1401 aa31.42■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms